SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.05g058700

Feature Type:gene_model
Chromosome:Gm05
Start:5560449
stop:5565090
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.05g058700
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT2G45140.1AT PVA12 JGI N/AIEA
GO:0005789GO-cc endoplasmic reticulum membrane JGI N/AIEA
KOG0439 KOG VAMP-associated protein involved in inositol metabolism JGI N/AIEA
PTHR10809PantherFam VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN JGI N/AIEA
PF00635Pfam MSP (Major sperm protein) domain JGI N/AIEA

Gene model name correspondences to Glyma.05g058700 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma05g04580 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.05g058700
>Glyma.05g058700.1 sequence-type=CDS polypeptide=Glyma.05g058700.1.p locus=Glyma.05g058700 id=Glyma.05g058700.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGAGCACTGGGGAGCTTCTCAACATCGAACCTCTCGAACTCAAGTTCCCCTTTGAGCTGAAGAAGCAGATCTCATGTTCTCTTCAATTGTCCAATAAGACCGATAGCTATGTGGCCTTCAAGGTGAAAACAACCAATCCGAAGAAGTATTGTGTTCGTCCGAACACTGGTATTGTCACGCCACGATCTACGTGTGATGTTATCGTTACCATGCAAGCGCAAAAAGAGGCTCCTGCTGATATGCAATGCAAGGATAAGTTTCTTCTTCAGAGCGTAAAAACTGTTGATGGTACCAGTCCGAAGGATATCACTGCAGACATGTTCAACAAGGAGGCAGGGCATGTGGTTGAGGAGTGCAAATTGAGAGTGCTGTATGTTTCTCCACCTCAACCACCGTCTCCTGTCCCAGAAGGTTCTGAGGAAGGATCCTCACCTAGAGGTTCTGTTTCAGAGAATGGAAATGCCAATGGTTCTGACTTCACACAAGCAGCAAGAGGATTTACTGAGCGGCCTGAATCTCAAGACAAATCTGCAGAGGCTAGAGCTCTTATCTCAAGGCTGACTGAAGAAAAGAATAATGCAATTCAACAAAATAGCAAGCTCCACCAGGAACTGGAGCTACTGAAGAGGGAAGGCAACAAAAGTCGTGGTGGAGTCTCATTTGTCATTGTCGTATTAATTGGCTTGCTTGGCATAATTATGGGGTATCTCATGAAGAAGACCTAA
Predicted protein sequences of Glyma.05g058700
>Glyma.05g058700.1.p sequence-type=predicted peptide transcript=Glyma.05g058700.1 locus=Glyma.05g058700 id=Glyma.05g058700.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MSTGELLNIEPLELKFPFELKKQISCSLQLSNKTDSYVAFKVKTTNPKKYCVRPNTGIVTPRSTCDVIVTMQAQKEAPADMQCKDKFLLQSVKTVDGTSPKDITADMFNKEAGHVVEECKLRVLYVSPPQPPSPVPEGSEEGSSPRGSVSENGNANGSDFTQAARGFTERPESQDKSAEARALISRLTEEKNNAIQQNSKLHQELELLKREGNKSRGGVSFVIVVLIGLLGIIMGYLMKKT*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo