SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.05g058100

Feature Type:gene_model
Chromosome:Gm05
Start:5500048
stop:5503122
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.05g058100
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G17260.1AT JGI N/AIEA
1.1.1.27EC L-lactate dehydrogenase JGI N/AIEA
GO:0019752GO-bp carboxylic acid metabolic process JGI N/AIEA
GO:0055114GO-bp obsolete oxidation-reduction process JGI N/AIEA
GO:0016491GO-mf oxidoreductase activity JGI N/AIEA
GO:0016616GO-mf oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor JGI N/AIEA
K00016KEGG Exosome JGI N/AIEA
PTHR11540PantherFam MALATE AND LACTATE DEHYDROGENASE JGI N/AIEA
PF00056Pfam lactate/malate dehydrogenase, NAD binding domain JGI N/AIEA
PF02866Pfam lactate/malate dehydrogenase, alpha/beta C-terminal domain JGI N/AIEA

Gene model name correspondences to Glyma.05g058100 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma05g04520 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.05g058100
>Glyma.05g058100.2 sequence-type=CDS polypeptide=Glyma.05g058100.2.p locus=Glyma.05g058100 id=Glyma.05g058100.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCATGGGTACTTTCCTCTTTGAAGTTTGAAGTGGTTTGGTGCAATTCTTCCTTCAGCTCTTGTTTAGTCCAAAACCGCTCTTCTTCCCTTCCTTCCACAGACCACAGTATTAGCCTCAACACACGCTCTATCTATTATAAAATCCACCCTCTTCTTCCCTTGTCTGCAACAACAATAACAATCTTCATCATGCACAAGAGCTCTTCAGATTCCACGTTGGGCCCGGGTGGCCTGGACCTCTCCCAGGCCTTCTTCAGGCCCATAAACAACGCCGCCCCTCCCTCCCCGACCAAGCGCCACAACAAGATCTCCGTCATCGGCGCCGGCAACGTGGGAATGGCCATCGCGCAGACCATCCTCACTCAGGACCTCACCGACGAGCTCGTCCTCGTCGACACCAACTCCGACAAGCTCCGCGGCGAGATGCTCGACCTCCAGCACGCCGCCGCCTTCCTCCCCCGCACCAAGATCCACGCCTCCGCCGACTCCTCCGTCACCGCCGGCTCCGACCTCTGCATCGTCACCGCCGGCGCCCGCCAGATCTCCGGCGAGTCACGCCTCAACCTCCTCCAGAGGAACCTCTCCCTCTTCCGCGCCATTATTCCCCCTCTCGTCCGTTACTCCCCCGACACAACTCTCCTCATCGTTTCCAACCCCGTCGACGTCCTCACCTACGTCGCGTGGAAGCTCTCCGGCTTCCCCTCCAACCGCGTCATCGGCTCCGGCACCAACTTGGACTCTTCCCGCTTCCGTTTCCTCATCGCCGATCACCTTGACGTCAACGCCCAGGACGTACAGGCATATATAGTAGGGGAGCATGGGGATAGTTCGGTGGCGTTATGGTCTAGCATTAGCATTGGGGGTGTTCCGGTTCTGAGCTTTTTGGAGAATCAACAGATTGTGTATGAGAAAGAGACGTTGGAGAACATACACAAGTCAGTGATAGACAGTGCGTATGAAGTGATCAAGCTGAAAGGGTACACTTCATGGGCCATTGGGTACTCTGTGGCTAACCTGGCCCGGTCCTTTATCAGGAACCAGAGGAAGATTCACCCTGTGTCTGTTCTGGCTAAAGGCTTTTATGGGATCGATGGAGAAGTGTTCCTGAGTTTGCCTGCAATGATTGGTAGAGGAGGGATACTGGGTGTGACCAATGTGCACTTGAATGAAGAGGAGACACAGAGGCTTAGAGATTCGGCCAAGACCATTCTCGAAGTACAGACTCAGTTGGGTATTTGA
Predicted protein sequences of Glyma.05g058100
>Glyma.05g058100.2.p sequence-type=predicted peptide transcript=Glyma.05g058100.2 locus=Glyma.05g058100 id=Glyma.05g058100.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MAWVLSSLKFEVVWCNSSFSSCLVQNRSSSLPSTDHSISLNTRSIYYKIHPLLPLSATTITIFIMHKSSSDSTLGPGGLDLSQAFFRPINNAAPPSPTKRHNKISVIGAGNVGMAIAQTILTQDLTDELVLVDTNSDKLRGEMLDLQHAAAFLPRTKIHASADSSVTAGSDLCIVTAGARQISGESRLNLLQRNLSLFRAIIPPLVRYSPDTTLLIVSNPVDVLTYVAWKLSGFPSNRVIGSGTNLDSSRFRFLIADHLDVNAQDVQAYIVGEHGDSSVALWSSISIGGVPVLSFLENQQIVYEKETLENIHKSVIDSAYEVIKLKGYTSWAIGYSVANLARSFIRNQRKIHPVSVLAKGFYGIDGEVFLSLPAMIGRGGILGVTNVHLNEEETQRLRDSAKTILEVQTQLGI*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo