SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.05g055900

Feature Type:gene_model
Chromosome:Gm05
Start:5190659
stop:5197682
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.05g055900
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G12260.1AT ANAC007,EMB2749,NAC007,VND4 JGI N/AIEA
GO:0006355GO-bp regulation of transcription, DNA-templated JGI N/AIEA
GO:0003677GO-mf DNA binding JGI N/AIEA
PTHR31989PantherFam NAC DOMAIN-CONTAINING PROTEIN 82-RELATED JGI N/AIEA
PF02365Pfam No apical meristem (NAM) protein JGI N/AIEA

Proteins Associated with Glyma.05g055900
LocusGene SymbolProtein Name
NAC024 NAC Transcription Factor gene 24

Gene model name correspondences to Glyma.05g055900 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma05g04250 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.05g055900
>Glyma.05g055900.1 sequence-type=CDS polypeptide=Glyma.05g055900.1.p locus=Glyma.05g055900 id=Glyma.05g055900.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGATACATTTTCACATGTACCACCAGGCTTTCGGTTTCATCCAACCGATGAAGAGCTCGTTGGTTACTACCTTAGGAAAAAGGTAGCGTCTAAAAGGATTGATCTAGATGTGATCAAAGATGTCGATCTCTATAAAATTGAACCATGGGATCTCCAAGAACTATGCAAAATAGGAACCGATGAACAAAGTGACTGGTACTTCTTCAGTCATAAAGATAAGAAATATCCAACTGGAACTCGCACCAATAGAGCTACAAAAGCAGGATTCTGGAAAGCCACGGGAAGAGACAAGGCAATATACTCTAAGCATTGCCTCATTGGCATGAGAAAGACTCTCGTGTTTTACAAAGGACGAGCCCCAAATGGACAGAAGTCTGATTGGATCATGCATGAGTACAGACTAGAAACTAATGAAAATGGAACTTCTCAGGAAGAAGGCTGGGTTGTGTGTAGAGTGTTCAAGAAGAGGATGACAACAACGCAGAAAGTGGGAGAGTATGATCAATCACCCTGTTGGTACGATGAGCAAGTTTCCTTCATGCAAGATCTTGAATCCCCAAGGCGCAATATTTCTCAGACTTATGCATCATACCACCATCACCAACAACAGCACCACCACCATCCCTGCAAGCCTGAGCTCATGGAATTGCAATACAACAACATTCCCCACGATGCATTCCTCCAACTTCCGCAACTCGAAAGCCCCAAAGTTACTCAATCATCATGCTCAGTTGTCCCTTATGGCTATGAAAGCAACAACAACAACAATGGAAGCACCTTGCAATTCTCATCACTCACTCAGGAAGAACAGCTACAATATTGCAATAATCAACAAAGTCACCATTCTCTCTATGGTAGCAATGATCATGCAGTTGACCAGGTCACAGATTGGCGTGTGCTTGACAAGTTTGTTGCTTCTCAGCTCAGTCACAACAACCAAGATGTTTCCAAGGAAACCAGTTATTCCAATGCACCTATCTTCCATGTGGCTGAACAAATTTCTGTGGCTGCAAATGGATCCAAAAAGGAGCAAGTTTCTCAGGAGTATGCTTCAACGTCTACCTCCAGTTACCAGATTGACCTGTGGAAGTGA

>Glyma.05g055900.2 sequence-type=CDS polypeptide=Glyma.05g055900.2.p locus=Glyma.05g055900 id=Glyma.05g055900.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGATACATTTTCACATGTACCACCAGGCTTTCGGTTTCATCCAACCGATGAAGAGCTCGTTGGTTACTACCTTAGGAAAAAGGTAGCGTCTAAAAGGATTGATCTAGATGTGATCAAAGATGTCGATCTCTATAAAATTGAACCATGGGATCTCCAAGAACTATGCAAAATAGGAACCGATGAACAAAGTGACTGGTACTTCTTCAGTCATAAAGATAAGAAATATCCAACTGGAACTCGCACCAATAGAGCTACAAAAGCAGGATTCTGGAAAGCCACGGGAAGAGACAAGGCAATATACTCTAAGCATTGCCTCATTGGCATGAGAAAGACTCTCGTGTTTTACAAAGGACGAGCCCCAAATGGACAGAAGTCTGATTGGATCATGCATGAGTACAGACTAGAAACTAATGAAAATGGAACTTCTCAGGAAGAAGGCTGGGTTGTGTGTAGAGTGTTCAAGAAGAGGATGACAACAACGCAGAAAGTGGGAGAGTATGATCAATCACCCTGTTGGTACGATGAGCAAGTTTCCTTCATGCAAGATCTTGAATCCCCAAGGCGCAATATTTCTCAGACTTATGCATCATACCACCATCACCAACAACAGCACCACCACCATCCCTGCAAGCCTGAGCTCATGGAATTGCAATACAACAACATTCCCCACGATGCATTCCTCCAACTTCCGCAACTCGAAAGCCCCAAAGTTACTCAATCATCATGCTCAGTTGTCCCTTATGGCTATGAAAGCAACAACAACAACAATGGAAGCACCTTGCAATTCTCATCACTCACTCAGGAAGAACAGCTACAATATTGCAATAATCAACAAAGTCACCATTCTCTCTATGGTAGCAATGATCATGCAGTTGACCAGGTCACAGATTGGCGTGTGCTTGACAAGTTTGTTGCTTCTCAGCTCAGTCACAACAACCAAGATGTTTCCAAGGAAACCAGTTATTCCAATGCACCTATCTTCCATGTGGCTGAACAAATTTCTGTGGCTGCAAATGGATCCAAAAAGGAGCAAGTTTCTCAGGAGTATGCTTCAACGTCTACCTCCAGTTACCAGATTGACCTGTGGAAGTGA

>Glyma.05g055900.3 sequence-type=CDS polypeptide=Glyma.05g055900.3.p locus=Glyma.05g055900 id=Glyma.05g055900.3.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGTCTGATATTTTGTCAGGAGGATATAAATACACAGGTTTTAATTCTTTGAGAGCGGAAATGGATACATTTTCACATGTACCACCAGGCTTTCGGTTTCATCCAACCGATGAAGAGCTCGTTGGTTACTACCTTAGGAAAAAGGTAGCGTCTAAAAGGATTGATCTAGATGTGATCAAAGATGTCGATCTCTATAAAATTGAACCATGGGATCTCCAAGAACTATGCAAAATAGGAACCGATGAACAAAGTGACTGGTACTTCTTCAGTCATAAAGATAAGAAATATCCAACTGGAACTCGCACCAATAGAGCTACAAAAGCAGGATTCTGGAAAGCCACGGGAAGAGACAAGGCAATATACTCTAAGCATTGCCTCATTGGCATGAGAAAGACTCTCGTGTTTTACAAAGGACGAGCCCCAAATGGACAGAAGTCTGATTGGATCATGCATGAGTACAGACTAGAAACTAATGAAAATGGAACTTCTCAGGAAGAAGGCTGGGTTGTGTGTAGAGTGTTCAAGAAGAGGATGACAACAACGCAGAAAGTGGGAGAGTATGATCAATCACCCTGTTGGTACGATGAGCAAGTTTCCTTCATGCAAGATCTTGAATCCCCAAGGCGCAATATTTCTCAGACTTATGCATCATACCACCATCACCAACAACAGCACCACCACCATCCCTGCAAGCCTGAGCTCATGGAATTGCAATACAACAACATTCCCCACGATGCATTCCTCCAACTTCCGCAACTCGAAAGCCCCAAAGTTACTCAATCATCATGCTCAGTTGTCCCTTATGGCTATGAAAGCAACAACAACAACAATGGAAGCACCTTGCAATTCTCATCACTCACTCAGGAAGAACAGCTACAATATTGCAATAATCAACAAAGTCACCATTCTCTCTATGGTAGCAATGATCATGCAGTTGACCAGGTCACAGATTGGCGTGTGCTTGACAAGTTTGTTGCTTCTCAGCTCAGTCACAACAACCAAGATGTTTCCAAGGAAACCAGTTATTCCAATGCACCTATCTTCCATGTGGCTGAACAAATTTCTGTGGCTGCAAATGGATCCAAAAAGGAGCAAGTTTCTCAGGAGTATGCTTCAACGTCTACCTCCAGTTACCAGATTGACCTGTGGAAGTGA

>Glyma.05g055900.4 sequence-type=CDS polypeptide=Glyma.05g055900.4.p locus=Glyma.05g055900 id=Glyma.05g055900.4.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGATACATTTTCACATGTACCACCAGGCTTTCGGTTTCATCCAACCGATGAAGAGCTCGTTGGTTACTACCTTAGGAAAAAGGTAGCGTCTAAAAGGATTGATCTAGATGTGATCAAAGATGTCGATCTCTATAAAATTGAACCATGGGATCTCCAAGAACTATGCAAAATAGGAACCGATGAACAAAGTGACTGGTACTTCTTCAGTCATAAAGATAAGAAATATCCAACTGGAACTCGCACCAATAGAGCTACAAAAGCAGGATTCTGGAAAGCCACGGGAAGAGACAAGGCAATATACTCTAAGCATTGCCTCATTGGCATGAGAAAGACTCTCGTGTTTTACAAAGGACGAGCCCCAAATGGACAGAAGTCTGATTGGATCATGCATGAGTACAGACTAGAAACTAATGAAAATGGAACTTCTCAGGAAGAAGGCTGGGTTGTGTGTAGAGTGTTCAAGAAGAGGATGACAACAACGCAGAAAGTGGGAGAGTATGATCAATCACCCTGTTGGTACGATGAGCAAGTTTCCTTCATGCAAGATCTTGAATCCCCAAGGCGCAATATTTCTCAGACTTATGCATCATACCACCATCACCAACAACAGCACCACCACCATCCCTGCAAGCCTGAGCTCATGGAATTGCAATACAACAACATTCCCCACGATGCATTCCTCCAACTTCCGCAACTCGAAAGCCCCAAAGTTACTCAATCATCATGCTCAGTTGTCCCTTATGGCTATGAAAGCAACAACAACAACAATGGAAGCACCTTGCAATTCTCATCACTCACTCAGGAAGAACAGCTACAATATTGCAATAATCAACAAAGTCACCATTCTCTCTATGGTAGCAATGATCATGCAGTTGACCAGGTCACAGATTGGCGTGTGCTTGACAAGTTTGTTGCTTCTCAGCTCAGTCACAACAACCAAGATGTTTCCAAGGAAACCAGTTATTCCAATGCACCTATCTTCCATGTGGCTGAACAAATTTCTGTGGCTGCAAATGGATCCAAAAAGGAGCAAGTTTCTCAGGAGTATGCTTCAACGTCTACCTCCAGTTACCAGATTGACCTGTGGAAGTGA

>Glyma.05g055900.5 sequence-type=CDS polypeptide=Glyma.05g055900.5.p locus=Glyma.05g055900 id=Glyma.05g055900.5.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGATACATTTTCACATGTACCACCAGGCTTTCGGTTTCATCCAACCGATGAAGAGCTCGTTGGTTACTACCTTAGGAAAAAGGTAGCGTCTAAAAGGATTGATCTAGATGTGATCAAAGATGTCGATCTCTATAAAATTGAACCATGGGATCTCCAAGAACTATGCAAAATAGGAACCGATGAACAAAGTGACTGGTACTTCTTCAGTCATAAAGATAAGAAATATCCAACTGGAACTCGCACCAATAGAGCTACAAAAGCAGGATTCTGGAAAGCCACGGGAAGAGACAAGGCAATATACTCTAAGCATTGCCTCATTGGCATGAGAAAGACTCTCGTGTTTTACAAAGGACGAGCCCCAAATGGACAGAAGTCTGATTGGATCATGCATGAGTACAGACTAGAAACTAATGAAAATGGAACTTCTCAGGAAGAAGGCTGGGTTGTGTGTAGAGTGTTCAAGAAGAGGATGACAACAACGCAGAAAGTGGGAGAGTATGATCAATCACCCTGTTGGTACGATGAGCAAGTTTCCTTCATGCAAGATCTTGAATCCCCAAGGCGCAATATTTCTCAGACTTATGCATCATACCACCATCACCAACAACAGCACCACCACCATCCCTGCAAGCCTGAGCTCATGGAATTGCAATACAACAACATTCCCCACGATGCATTCCTCCAACTTCCGCAACTCGAAAGCCCCAAAGTTACTCAATCATCATGCTCAGTTGTCCCTTATGGCTATGAAAGCAACAACAACAACAATGGAAGCACCTTGCAATTCTCATCACTCACTCAGGAAGAACAGCTACAATATTGCAATAATCAACAAAGTCACCATTCTCTCTATGGTAGCAATGATCATGCAGTTGACCAGGTCACAGATTGGCGTGTGCTTGACAAGTTTGTTGCTTCTCAGCTCAGTCACAACAACCAAGATGTTTCCAAGGAAACCAGTTATTCCAATGCACCTATCTTCCATGTGGCTGAACAAATTTCTGTGGCTGCAAATGGATCCAAAAAGGAGCAAGTTTCTCAGGAGTATGCTTCAACGTCTACCTCCAGTTACCAGATTGACCTGTGGAAGTGA
Predicted protein sequences of Glyma.05g055900
>Glyma.05g055900.1.p sequence-type=predicted peptide transcript=Glyma.05g055900.1 locus=Glyma.05g055900 id=Glyma.05g055900.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MDTFSHVPPGFRFHPTDEELVGYYLRKKVASKRIDLDVIKDVDLYKIEPWDLQELCKIGTDEQSDWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYSKHCLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLETNENGTSQEEGWVVCRVFKKRMTTTQKVGEYDQSPCWYDEQVSFMQDLESPRRNISQTYASYHHHQQQHHHHPCKPELMELQYNNIPHDAFLQLPQLESPKVTQSSCSVVPYGYESNNNNNGSTLQFSSLTQEEQLQYCNNQQSHHSLYGSNDHAVDQVTDWRVLDKFVASQLSHNNQDVSKETSYSNAPIFHVAEQISVAANGSKKEQVSQEYASTSTSSYQIDLWK*

>Glyma.05g055900.2.p sequence-type=predicted peptide transcript=Glyma.05g055900.2 locus=Glyma.05g055900 id=Glyma.05g055900.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MDTFSHVPPGFRFHPTDEELVGYYLRKKVASKRIDLDVIKDVDLYKIEPWDLQELCKIGTDEQSDWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYSKHCLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLETNENGTSQEEGWVVCRVFKKRMTTTQKVGEYDQSPCWYDEQVSFMQDLESPRRNISQTYASYHHHQQQHHHHPCKPELMELQYNNIPHDAFLQLPQLESPKVTQSSCSVVPYGYESNNNNNGSTLQFSSLTQEEQLQYCNNQQSHHSLYGSNDHAVDQVTDWRVLDKFVASQLSHNNQDVSKETSYSNAPIFHVAEQISVAANGSKKEQVSQEYASTSTSSYQIDLWK*

>Glyma.05g055900.3.p sequence-type=predicted peptide transcript=Glyma.05g055900.3 locus=Glyma.05g055900 id=Glyma.05g055900.3.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MSDILSGGYKYTGFNSLRAEMDTFSHVPPGFRFHPTDEELVGYYLRKKVASKRIDLDVIKDVDLYKIEPWDLQELCKIGTDEQSDWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYSKHCLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLETNENGTSQEEGWVVCRVFKKRMTTTQKVGEYDQSPCWYDEQVSFMQDLESPRRNISQTYASYHHHQQQHHHHPCKPELMELQYNNIPHDAFLQLPQLESPKVTQSSCSVVPYGYESNNNNNGSTLQFSSLTQEEQLQYCNNQQSHHSLYGSNDHAVDQVTDWRVLDKFVASQLSHNNQDVSKETSYSNAPIFHVAEQISVAANGSKKEQVSQEYASTSTSSYQIDLWK*

>Glyma.05g055900.4.p sequence-type=predicted peptide transcript=Glyma.05g055900.4 locus=Glyma.05g055900 id=Glyma.05g055900.4.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MDTFSHVPPGFRFHPTDEELVGYYLRKKVASKRIDLDVIKDVDLYKIEPWDLQELCKIGTDEQSDWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYSKHCLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLETNENGTSQEEGWVVCRVFKKRMTTTQKVGEYDQSPCWYDEQVSFMQDLESPRRNISQTYASYHHHQQQHHHHPCKPELMELQYNNIPHDAFLQLPQLESPKVTQSSCSVVPYGYESNNNNNGSTLQFSSLTQEEQLQYCNNQQSHHSLYGSNDHAVDQVTDWRVLDKFVASQLSHNNQDVSKETSYSNAPIFHVAEQISVAANGSKKEQVSQEYASTSTSSYQIDLWK*

>Glyma.05g055900.5.p sequence-type=predicted peptide transcript=Glyma.05g055900.5 locus=Glyma.05g055900 id=Glyma.05g055900.5.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MDTFSHVPPGFRFHPTDEELVGYYLRKKVASKRIDLDVIKDVDLYKIEPWDLQELCKIGTDEQSDWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYSKHCLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLETNENGTSQEEGWVVCRVFKKRMTTTQKVGEYDQSPCWYDEQVSFMQDLESPRRNISQTYASYHHHQQQHHHHPCKPELMELQYNNIPHDAFLQLPQLESPKVTQSSCSVVPYGYESNNNNNGSTLQFSSLTQEEQLQYCNNQQSHHSLYGSNDHAVDQVTDWRVLDKFVASQLSHNNQDVSKETSYSNAPIFHVAEQISVAANGSKKEQVSQEYASTSTSSYQIDLWK*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo