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Report for Sequence Feature Glyma.05g055000

Feature Type:gene_model
Chromosome:Gm05
Start:5117809
stop:5122290
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.05g055000
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G12520.1AT ATCCS,CCS JGI N/AIEA
GO:0006801GO-bp superoxide metabolic process JGI N/AIEA
GO:0030001GO-bp metal ion transport JGI N/AIEA
GO:0055114GO-bp obsolete oxidation-reduction process JGI N/AIEA
GO:0005507GO-mf copper ion binding JGI N/AIEA
GO:0016532GO-mf superoxide dismutase copper chaperone activity JGI N/AIEA
GO:0046872GO-mf metal ion binding JGI N/AIEA
K04569KEGG Pathways of neurodegeneration - multiple diseases JGI N/AIEA
KOG4656 KOG Copper chaperone for superoxide dismutase JGI N/AIEA
PTHR10003PantherFam SUPEROXIDE DISMUTASE CU-ZN -RELATED JGI N/AIEA
PF00080Pfam Copper/zinc superoxide dismutase (SODC) JGI N/AIEA
PF00403Pfam Heavy-metal-associated domain JGI N/AIEA

Proteins Associated with Glyma.05g055000
LocusGene SymbolProtein Name
CCS Cu/Zn-superoxide dismutase copper chaperone

Gene model name correspondences to Glyma.05g055000 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma05g04170 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.05g055000
>Glyma.05g055000.1 sequence-type=CDS polypeptide=Glyma.05g055000.1.p locus=Glyma.05g055000 id=Glyma.05g055000.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCATTTCTGAGGTCAATAGCAACAACAGCAATTGCTACTATACCTGCAGCCTTAGCATTCTCATCATCTTCATCATCTTCTTTCCCTCGCTCTTCCCAATCCCCCAATCCCCAAAATAGATTAGGTCTTGTCAAAACACTTGCTACTCCTCCCTCTGCTCTCCACATGGACCACAAACTCTCTTCTCAGCCTGACGCTGTCTTGCCCGAGTTACTGACGGAGTTCATGGTGGACATGAAATGCGAAGGTTGTGTTAATGCTGTCAAAAATAAGTTGAACGAGATAAATGGAGTTAAGAACGTAGAGGTGGACTTGAGCAATCAGGTTGTGAGGATTCTCGGTTCAACGCCGGTGAAGACTATGACTGAAGCTTTGGAGCAGACTGGTAGAAAAGCCCGGTTAATTGGACAAGGAGTGCCGGAAGACTTCTTAATATCTGCTGCTGTTTCCGAATTCAAAGGTCCAGATATTTTTGGTGTTGTTCGCCTGGCTCAAGTAAATATGGAACTGGCTAGGATTGAAGCCAACTTTAGCGGGCTGTCGCCAGGAAAGCATGGTTGGTCTATTAATGAGTTTGGTGATCTGACTAGAGGTGCAGCAAGCACTGGTAAAATGTTCAATCCGGTAAATGAGGAAAACAGTAAAGAGCCACTGGGCGACCTGGGAACACTAGAAGCTAACGAAAAGGGTGAGGCCTTCTATAGTGGGGTCAAAGAAAAGCTGAGGGTGGCTGATCTTATTGGACGATCTGTGGTGGTATATGCAACTGAAGATAAATCAGAACATGGTATAACTGCTGCAGTAATTGCCAGAAGTGCTGGGGTGGGTGAGAACTATAAGAAACTCTGTACGTGTGATGGCACCACCATATGGGAGGCCACGGATACAGATTTTGTTACTAGCAAGGTCTGA

>Glyma.05g055000.2 sequence-type=CDS polypeptide=Glyma.05g055000.2.p locus=Glyma.05g055000 id=Glyma.05g055000.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCATTTCTGAGGTCAATAGCAACAACAGCAATTGCTACTATACCTGCAGCCTTAGCATTCTCATCATCTTCATCATCTTCTTTCCCTCGCTCTTCCCAATCCCCCAATCCCCAAAATAGATTAGGTCTTGTCAAAACACTTGCTACTCCTCCCTCTGCTCTCCACATGGACCACAAACTCTCTTCTCAGCCTGACGCTGTCTTGCCCGAGTTACTGACGGAGTTCATGGTGGACATGAAATGCGAAGGTTGTGTTAATGCTGTCAAAAATAAGTTGAACGAGATAAATGGAGTTAAGAACGTAGAGGTGGACTTGAGCAATCAGGTTGTGAGGATTCTCGGTTCAACGCCGGTGAAGACTATGACTGAAGCTTTGGAGCAGACTGGTAGAAAAGCCCGGTTAATTGGACAAGGAGTGCCGGAAGACTTCTTAATATCTGCTGCTGTTTCCGAATTCAAAGGTCCAGATATTTTTGGTGTTGTTCGCCTGGCTCAAGTAAATATGGAACTGGCTAGGATTGAAGCCAACTTTAGCGGGCTGTCGCCAGGAAAGCATGGTTGGTCTATTAATGAGTTTGGTGATCTGACTAGAGGTGCAGCAAGCACTGGTAAAATGTTCAATCCGCCACTGGGCGACCTGGGAACACTAGAAGCTAACGAAAAGGGTGAGGCCTTCTATAGTGGGGTCAAAGAAAAGCTGAGGGTGGCTGATCTTATTGGACGATCTGTGGTGGTATATGCAACTGAAGATAAATCAGAACATGGTATAACTGCTGCAGTAATTGCCAGAAGTGCTGGGGTGGGTGAGAACTATAAGAAACTCTGTACGTGTGATGGCACCACCATATGGGAGGCCACGGATACAGATTTTGTTACTAGCAAGGTCTGA
Predicted protein sequences of Glyma.05g055000
>Glyma.05g055000.1.p sequence-type=predicted peptide transcript=Glyma.05g055000.1 locus=Glyma.05g055000 id=Glyma.05g055000.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MAFLRSIATTAIATIPAALAFSSSSSSSFPRSSQSPNPQNRLGLVKTLATPPSALHMDHKLSSQPDAVLPELLTEFMVDMKCEGCVNAVKNKLNEINGVKNVEVDLSNQVVRILGSTPVKTMTEALEQTGRKARLIGQGVPEDFLISAAVSEFKGPDIFGVVRLAQVNMELARIEANFSGLSPGKHGWSINEFGDLTRGAASTGKMFNPVNEENSKEPLGDLGTLEANEKGEAFYSGVKEKLRVADLIGRSVVVYATEDKSEHGITAAVIARSAGVGENYKKLCTCDGTTIWEATDTDFVTSKV*

>Glyma.05g055000.2.p sequence-type=predicted peptide transcript=Glyma.05g055000.2 locus=Glyma.05g055000 id=Glyma.05g055000.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MAFLRSIATTAIATIPAALAFSSSSSSSFPRSSQSPNPQNRLGLVKTLATPPSALHMDHKLSSQPDAVLPELLTEFMVDMKCEGCVNAVKNKLNEINGVKNVEVDLSNQVVRILGSTPVKTMTEALEQTGRKARLIGQGVPEDFLISAAVSEFKGPDIFGVVRLAQVNMELARIEANFSGLSPGKHGWSINEFGDLTRGAASTGKMFNPPLGDLGTLEANEKGEAFYSGVKEKLRVADLIGRSVVVYATEDKSEHGITAAVIARSAGVGENYKKLCTCDGTTIWEATDTDFVTSKV*






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