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Report for Sequence Feature Glyma.05g042400

Feature Type:gene_model
Chromosome:Gm05
Start:3903560
stop:3908210
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G50210.1AT OLD5,QS,SUFE3 JGI N/AIEA
2.5.1.72EC quinolinate synthase JGI N/AIEA
GO:0009435GO-bp NAD biosynthetic process JGI N/AIEA
GO:0008987GO-mf quinolinate synthetase A activity JGI N/AIEA
GO:0051539GO-mf 4 iron, 4 sulfur cluster binding JGI N/AIEA
K03517KEGG Nicotinate and nicotinamide metabolism JGI N/AIEA
PTHR30573PantherFam QUINOLINATE SYNTHETASE A JGI N/AIEA
PF02445Pfam Quinolinate synthetase A protein JGI N/AIEA
PF02657Pfam Fe-S metabolism associated domain JGI N/AIEA

Corresponding NameAnnotation VersionEvidenceComments
Glyma05g02710 Wm82.a1.v1.1IGC As supplied by JGI


>Glyma.05g042400.1 sequence-type=CDS polypeptide=Glyma.05g042400.1.p locus=Glyma.05g042400 id=Glyma.05g042400.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCTGCCTACACCACTTTCTCCTTCTTTTCAACCCCGCAGAACCAAAAAACCTTTTTTCTTCAACCCTTTAAACGCCACGTTTCGTTTCTTAAACCATTCAAATGCGTCCGACCTGGTTCAGCTTCAACCCGATTCAGACCGAACCCTGTTATTTCCAGCTCCGCGCTCCGTACCTCGGCACTGGTCGTTCCCTCTAAACTCGAGCACCTAGCGGAGGAGTTCGGCTCCCTGCGGGAGCCGGTGGAGCGTGTGAAGCGGCTGCTGCACTACGCGGCGGCGATGGCGCCGATGCCGGAGTCCAACCGGGTCGACGCGAACCGGGTGATGGGGTGCACCGCGCGCGTGTGGGTGGAGGTGGGGATCGACGAAGAGGGAAAAGTGCGCGTGGCGGCGGACAGCGATTCGGAGATTACGAGGGGGTTCTGCGCGTGTCTGGTTTGGGTGCTCGATGGTTCGGAGCCGGACGAGGTTATGAAAGTGACCACCGATGATTTAACGGCTCTGAATGTCGGGTTGCCGGGGGGCAGTGGGCGTTCCAGGGTGAACACGTGGCACAATGTGCTCGTCAGCATGCAGAAGAGGACCAAACAGTTGCTGGCTCAGAGAGAAGGGAAGGTTCCCTTTGAGTCTTTTCCTTCGTTGGTTATTTCTTCTGATGGGGTTTTCCCCAAAGGTACCTACGCTGAAGCACAGGCAAAATATCTGTTCCCTAATGAGTTAAAAGTTGATGAACTAGTCAATGTGCTGAAGGAGAAGAAAATTGGTGTTGTTGCACACTTTTACATGGATCCTGAGGTCCAAGGCATTTTAACTGCTGCTCAGAAGCAGTGGCCACATATCCATATATCTGATTCACTGGTCATGGCAGATTCAGCAGTCAAAATGGCAAAAGCCGGATGCCAGTTCATAACAGTTCTAGGTGTGGATTTTATGTCAGAAAATGTGCGTGCCATCCTTGATCAAGCTGGTTTCAGTGAGGTTGGCGTGTATAGGATGTCAAATGAGCAAATTGGATGTTCTCTGGCTGATGCGGCAGCTACTCGTACTTACATGGAATATCTTACAGCTGCTTCTAGGTCTACTTCTTTGCATGTCATATACATTAACACTAAGTTAGAGACAAAGGCATATGCTCATGAACTTGTGCCTACAATAACCTGTACTTCATCAAATGTTGTCCAGACTATCCTACAGGCATTTGCTCAAGTTCCAGATTTGAGCATATTTTATGGACCTGATTCTTACATGGGTGCAAATATCAAAGATTTGTTCCAACAAATGACAAAAATGACTGATGAAGAGATTGCTGCAATACATCCTGAGCACAGTCAAGACTCTATTAGATCATTACTACCTCGACTTCACTATTTTCAGGATGGAACGTGCATTGTTCACCATCTATTTGGCCATGAGGTTGTGGAGAAGATAAAAGAAATGTACTGTGATGCATTCCTTACTGCCCATCTTGAGGTACCTGGAGAGATGTTTTCATTGGCAATGGAAGCAAAGAGAAGGGGAATGGGTGTAGTAGGCTCCACAAAGAATATTTTGGATTTCATAAAGGACAGGGTTCAGGAAGCTTTGGATAGAAATATAGATGATCATCTCCAATTTGTTTTAGGAACAGAATCTGGGATGGTGACTTCAATTGTGGCAACAGTTCGTAGTTTGTTGGAGCCTGTGAAGTCTTCTTCTGAAAGAGCAAAAGTTACTGTTGAAATAGTCTTTCCAGTTTCATCAGACTCAATCTCAACGACCACCTCAAGTTTATCCTCCGGCCTTCAGACTGCCAAAGTGGGTGATATCATACTTCCTGTTGTACCAGGAATAGCTAGCGGGGAGGGCTGTTCAATTCATGGTGGCTGTGCATCTTGTCCATACATGAAGATGAATTCTCTTGGCTCACTCCTGAAAGTTAGCAATCACCTACCCGATGAAGAAAATATCCTTTCTGCATACAAGGCAGAGCGATTTAAGTTGCAAACACCGAATGGCAGATCAGTGGCAGATGTTGGATGTGAACCTATATTGCACATGAGGAACTTCCAGGCTACTAAAAAGCTTCCAGAGAAGCTTGTTGATCAGATTCTTCGTCCCCAACACAGTTGA

>Glyma.05g042400.1.p sequence-type=predicted peptide transcript=Glyma.05g042400.1 locus=Glyma.05g042400 id=Glyma.05g042400.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MAAYTTFSFFSTPQNQKTFFLQPFKRHVSFLKPFKCVRPGSASTRFRPNPVISSSALRTSALVVPSKLEHLAEEFGSLREPVERVKRLLHYAAAMAPMPESNRVDANRVMGCTARVWVEVGIDEEGKVRVAADSDSEITRGFCACLVWVLDGSEPDEVMKVTTDDLTALNVGLPGGSGRSRVNTWHNVLVSMQKRTKQLLAQREGKVPFESFPSLVISSDGVFPKGTYAEAQAKYLFPNELKVDELVNVLKEKKIGVVAHFYMDPEVQGILTAAQKQWPHIHISDSLVMADSAVKMAKAGCQFITVLGVDFMSENVRAILDQAGFSEVGVYRMSNEQIGCSLADAAATRTYMEYLTAASRSTSLHVIYINTKLETKAYAHELVPTITCTSSNVVQTILQAFAQVPDLSIFYGPDSYMGANIKDLFQQMTKMTDEEIAAIHPEHSQDSIRSLLPRLHYFQDGTCIVHHLFGHEVVEKIKEMYCDAFLTAHLEVPGEMFSLAMEAKRRGMGVVGSTKNILDFIKDRVQEALDRNIDDHLQFVLGTESGMVTSIVATVRSLLEPVKSSSERAKVTVEIVFPVSSDSISTTTSSLSSGLQTAKVGDIILPVVPGIASGEGCSIHGGCASCPYMKMNSLGSLLKVSNHLPDEENILSAYKAERFKLQTPNGRSVADVGCEPILHMRNFQATKKLPEKLVDQILRPQHS*







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