SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.05g042200

Feature Type:gene_model
Chromosome:Gm05
Start:3897416
stop:3898683
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.05g042200
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G50200.2AT ATNRT3.1,NRT3.1,WR3 JGI N/AIEA
PTHR34806PantherFam HIGH-AFFINITY NITRATE TRANSPORTER 3.2 JGI N/AIEA
PTHR34806:SF1PantherFam HIGH-AFFINITY NITRATE TRANSPORTER 3.1 JGI N/AIEA
PF16974Pfam High-affinity nitrate transporter accessory JGI N/AIEA

Gene model name correspondences to Glyma.05g042200 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma05g02690 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.05g042200
>Glyma.05g042200.1 sequence-type=CDS polypeptide=Glyma.05g042200.1.p locus=Glyma.05g042200 id=Glyma.05g042200.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCAGCACAAGGGCTTGTGGTAGTAGCATCACTTCTAATTTTCTGTTTAGCTGGAAGTTGCTATGGGAAGGTTCACTTCTCTACCTTGAAAAGAACCCTTGATGTCACCGCTTCCCCCAAGCAGGGACAAGTTCTGGAGGCTGGATTGGACAAAATCACAGTGACATGGGCATTGAACAAGACCTTACCTGCGGGGACAGACTCTGCCTACAAAACCATAAAGCTGAAGCTATGCTACGCGCCCATTAGCCAAAAGGACCGCGCGTGGAGAAAGACAGAGGATGAGCTGAACAGGGACAAGACATGCCAGCACAAGATCGTGGCCAAACCCTACGACGCTTCCAACAAAACCGTGCAGAGGTACGAGTGGCTGGTCGAGCGCGACGTGCCCAAAGCCACGTACTTCGTACGCGCCTACGCGTTCGACTCCAACGACGCGGAAGTGGCTTACGGCCAGACCACCGACGGCAAGAAGAGCACCAACCTGTTCGAGATCAATGCGGTGAGTGGGCGCCACGCGTCCCTCGATATCTGCTCCATTTGCTTCAGTGTTTTCTCCGTCGTTTCCCTCTTTTTCTTCTTCTATATCGAGAAAAGAAAGGGAAAGGCTTCTTCCTCAAAGTGA
Predicted protein sequences of Glyma.05g042200
>Glyma.05g042200.1.p sequence-type=predicted peptide transcript=Glyma.05g042200.1 locus=Glyma.05g042200 id=Glyma.05g042200.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MAAQGLVVVASLLIFCLAGSCYGKVHFSTLKRTLDVTASPKQGQVLEAGLDKITVTWALNKTLPAGTDSAYKTIKLKLCYAPISQKDRAWRKTEDELNRDKTCQHKIVAKPYDASNKTVQRYEWLVERDVPKATYFVRAYAFDSNDAEVAYGQTTDGKKSTNLFEINAVSGRHASLDICSICFSVFSVVSLFFFFYIEKRKGKASSSK*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo