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Report for Sequence Feature Glyma.05g040500

Feature Type:gene_model
Chromosome:Gm05
Start:3747368
stop:3750246
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.05g040500
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G63090.3AT LOB JGI N/AIEA
PTHR31301PantherFam LOB DOMAIN-CONTAINING PROTEIN 4-RELATED JGI N/AIEA
PF03195Pfam Lateral organ boundaries (LOB) domain JGI N/AIEA

Proteins Associated with Glyma.05g040500
LocusGene SymbolProtein Name
LBD21 LBD domain-containing transcription factor

Gene model name correspondences to Glyma.05g040500 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma05g02530 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.05g040500
>Glyma.05g040500.1 sequence-type=CDS polypeptide=Glyma.05g040500.1.p locus=Glyma.05g040500 id=Glyma.05g040500.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGCCAATCTTTCTAGTGCAGGGAAAAATGGCATCATCCAGCTCTTACAACTCTCCATGTGCTGCCTGCAAGTTCTTGAGGAGGAAATGCATGCCAGGATGCATCTTTGCACCTTACTTTCCACCAGAAGAGCCTCAAAAGTTCGCAAACGTCCACAAAATCTTTGGAGCCAGCAACGTGACGAAGCTCCTCAACGAGCTTCTCCCTCACCAGAGGGAGGATGCAGTGAACTCCCTCGCCTATGAGGCAGAGGCACGCGTGAGGGACCCAGTTTATGGCTGTGTAGGAGCCATCTCATTCCTGCAGAGACAAGTCCAAAGGCTCCAAAAGGAGCTTGATGCTGCAAACGCTGATCTGCTACGCTATTCTTACACTGACATCACTCCAACCTCTCTTTCTGTGCCACCAGGACTTGCTTCATTTCACCAAGTACCCCAAAGGCAGTTTAGTGCAAGATTTGGTAACGAAGCAAGTGGGTTTTATCGCCACCAATCTGCTGCTACTGCTTTTTCCTTTCCTTATGCTCTTCCTTGGACTGATACCTCCTCGGAGGATATCAGTGAGGGAGCAGGAGCAGGAGGAGGTAATTTGTGA

>Glyma.05g040500.2 sequence-type=CDS polypeptide=Glyma.05g040500.2.p locus=Glyma.05g040500 id=Glyma.05g040500.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCATCATCCAGCTCTTACAACTCTCCATGTGCTGCCTGCAAGTTCTTGAGGAGGAAATGCATGCCAGGATGCATCTTTGCACCTTACTTTCCACCAGAAGAGCCTCAAAAGTTCGCAAACGTCCACAAAATCTTTGGAGCCAGCAACGTGACGAAGCTCCTCAACGAGCTTCTCCCTCACCAGAGGGAGGATGCAGTGAACTCCCTCGCCTATGAGGCAGAGGCACGCGTGAGGGACCCAGTTTATGGCTGTGTAGGAGCCATCTCATTCCTGCAGAGACAAGTCCAAAGGCTCCAAAAGGAGCTTGATGCTGCAAACGCTGATCTGCTACGCTATTCTTACACTGACATCACTCCAACCTCTCTTTCTGTGCCACCAGGACTTGCTTCATTTCACCAAGTACCCCAAAGGCAGTTTAGTGCAAGATTTGGTAACGAAGCAAGTGGGTTTTATCGCCACCAATCTGCTGCTACTGCTTTTTCCTTTCCTTATGCTCTTCCTTGGACTGATACCTCCTCGGAGGATATCAGTGAGGGAGCAGGAGCAGGAGGAGGTAATTTGTGA

>Glyma.05g040500.3 sequence-type=CDS polypeptide=Glyma.05g040500.3.p locus=Glyma.05g040500 id=Glyma.05g040500.3.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCATCATCCAGCTCTTACAACTCTCCATGTGCTGCCTGCAAGTTCTTGAGGAGGAAATGCATGCCAGGATGCATCTTTGCACCTTACTTTCCACCAGAAGAGCCTCAAAAGTTCGCAAACGTCCACAAAATCTTTGGAGCCAGCAACGTGACGAAGCTCCTCAACGAGCTTCTCCCTCACCAGAGGGAGGATGCAGTGAACTCCCTCGCCTATGAGGCAGAGGCACGCGTGAGGGACCCAGTTTATGGCTGTGTAGGAGCCATCTCATTCCTGCAGAGACAAGTCCAAAGGCTCCAAAAGGAGCTTGATGCTGCAAACGCTGATCTGCTACGCTATTCTTACACTGACATCACTCCAACCTCTCTTTCTGTGCCACCAGGACTTGCTTCATTTCACCAAGTACCCCAAAGGCAGTTTAGTGCAAGATTTGGTAACGAAGCAAGTGGGTTTTATCGCCACCAATCTGCTGCTACTGCTTTTTCCTTTCCTTATGCTCTTCCTTGGACTGATACCTCCTCGGAGGATATCAGTGAGGGAGCAGGAGCAGGAGGAGGTAATTTGTGA
Predicted protein sequences of Glyma.05g040500
>Glyma.05g040500.1.p sequence-type=predicted peptide transcript=Glyma.05g040500.1 locus=Glyma.05g040500 id=Glyma.05g040500.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MPIFLVQGKMASSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPHQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLLRYSYTDITPTSLSVPPGLASFHQVPQRQFSARFGNEASGFYRHQSAATAFSFPYALPWTDTSSEDISEGAGAGGGNL*

>Glyma.05g040500.2.p sequence-type=predicted peptide transcript=Glyma.05g040500.2 locus=Glyma.05g040500 id=Glyma.05g040500.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MASSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPHQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLLRYSYTDITPTSLSVPPGLASFHQVPQRQFSARFGNEASGFYRHQSAATAFSFPYALPWTDTSSEDISEGAGAGGGNL*

>Glyma.05g040500.3.p sequence-type=predicted peptide transcript=Glyma.05g040500.3 locus=Glyma.05g040500 id=Glyma.05g040500.3.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MASSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPHQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLLRYSYTDITPTSLSVPPGLASFHQVPQRQFSARFGNEASGFYRHQSAATAFSFPYALPWTDTSSEDISEGAGAGGGNL*






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