SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.05g040000

Feature Type:gene_model
Chromosome:Gm05
Start:3682618
stop:3686741
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.05g040000
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G48210.1AT JGI N/AIEA
K11550KEGG Chromosome and associated proteins JGI N/AIEA
KOG4657 KOG Uncharacterized conserved protein JGI N/AIEA
PTHR14281PantherFam KINETOCHORE PROTEIN SPC25-RELATED JGI N/AIEA
PTHR14281:SF0PantherFam KINETOCHORE PROTEIN SPC25 JGI N/AIEA
PF08234Pfam Chromosome segregation protein Spc25 JGI N/AIEA

Gene model name correspondences to Glyma.05g040000 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma05g02480 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.05g040000
>Glyma.05g040000.1 sequence-type=CDS polypeptide=Glyma.05g040000.1.p locus=Glyma.05g040000 id=Glyma.05g040000.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGAGTCCCCAATCTCAATCTGCGACACTGAGATCCCTCTTCAAATGCAGAGCATCGATGCTTTCACCGCTTCTTACGTCAAATCCCTCCATTCCCTCAGAGCCACAGCGCAAGAAACCGCTCGATGTCAAGTTCAACTAGACGAGGTTAAATCTAAACTCAGAGAGACCGAGGATGATTTCGTCAAAGCACTTGCGGTCAAGACCCGCAAAGAGGCCAAGCGAATGGCTTTGATGGATGCTATTGCTTCTGCAAAGGCTAGAGTTGAAGACCTCAATGCATCTATTCAGGAGCAGCGAACCAAAAAGCAAGAATATGCTGCATTTATATCTCAACAATCTCTCGCTTTGGCAGCATCTGAAGGGAAGTTAAATGAAAGCATTGAACAGAATGATGAAACACAGGCCATTTCCTGGTACAATAGGGTCCTTGGTTTTCATGTAAAAGGCGGACGTGGGGTAAAATTCACATTCAAGAATATAAATATGAACAATCCAGATGAGGAGTACTTTTTTACTATCTTCCATGAAAATGATACATACTCATTGTTAAGCTGTGAACATTCCCTCAGGGACACCAAAGAGTTGATCCATGAATTAAACAAGACAAATGATCTATTTAAATTTGTCAGAATAATGAGGAAAAAGTTCCAAGAAGTTGTGGCACAAGGGAATTTAGTTGTGACAAAAGATGAACATGAAGAATCTGCCTTTAACTCTGCTTCTGCTCCAGTTTTATCAATGTCATCTGTTAGAAGTGATTTTCTAGGCAAGGAAAATGAGCATCAAGCTGAACCTATAGAAGGCAATAAACAGTTCAAAAAACAAAATGTTCATAGAAGGCTAAAATCATCAGTTTTATCTCCTGGATCTGCATCATCTGTTCGCCAGTCTCCTCGTTTGAAGGCTAGGAAATAA
Predicted protein sequences of Glyma.05g040000
>Glyma.05g040000.1.p sequence-type=predicted peptide transcript=Glyma.05g040000.1 locus=Glyma.05g040000 id=Glyma.05g040000.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MESPISICDTEIPLQMQSIDAFTASYVKSLHSLRATAQETARCQVQLDEVKSKLRETEDDFVKALAVKTRKEAKRMALMDAIASAKARVEDLNASIQEQRTKKQEYAAFISQQSLALAASEGKLNESIEQNDETQAISWYNRVLGFHVKGGRGVKFTFKNINMNNPDEEYFFTIFHENDTYSLLSCEHSLRDTKELIHELNKTNDLFKFVRIMRKKFQEVVAQGNLVVTKDEHEESAFNSASAPVLSMSSVRSDFLGKENEHQAEPIEGNKQFKKQNVHRRLKSSVLSPGSASSVRQSPRLKARK*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo