SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.05g039000

Feature Type:gene_model
Chromosome:Gm05
Start:3577899
stop:3583336
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.05g039000
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G50290.1AT JGI N/AIEA
GO:0030247GO-mf polysaccharide binding JGI N/AIEA
PTHR33355PantherFam WALL-ASSOCIATED RECEPTOR KINASE CARBOXY-TERMINAL PROTEIN-RELATED JGI N/AIEA
PTHR33355:SF3PantherFam GUB_WAK_BIND DOMAIN-CONTAINING PROTEIN JGI N/AIEA
PF13947Pfam Wall-associated receptor kinase galacturonan-binding JGI N/AIEA

Gene model name correspondences to Glyma.05g039000 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma05g02360 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.05g039000
>Glyma.05g039000.1 sequence-type=CDS polypeptide=Glyma.05g039000.1.p locus=Glyma.05g039000 id=Glyma.05g039000.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGCCCTCATTACTCTCCGCACTGTACCTCATTCTCTCAGCATACTTAATCCCTTTATGTTTGAGCCACCCCAACACATGCCGCTCATATTGCGGCAACATAACCATCGACTACCCGTTCGCACTCCAATACGGTTGCGGCCACCCCGGCTTCCGCGACCTCCTCTTCTGCATGAACGACGTTCTCATGTTCCACGTGAGCTCCGGCTCCTACAGGGTCCTCGAGATCGACTACGCCTACCAGGCCCTCACGCTCCACGAGCCCCACATGTCCACCTGCGACAACCTCGTCCTCGGAACCCGCGGCAACGGCTTCTCCGTCGAGCCCTGGCGCGCGCCATACATGAACCCTGCCGCCGACAACGTCTTCATGCTCATCGCCTGCTCCCCACGATCCCCCTTGTTCCAGGGCTTCCCCGGGAAGCACCTCCCCTGCCGCAACGTCTCTGGCATGGGCTGCGAGGACTACTACGCCTGCCCGGCCTGGGAGATGTTGGGCCACAAGAGATTGGGCTCAGCCTCGTTCTTTGGGTCAGGCCCACCCGAGTGCTGTGCTGTTCCGTACGAGGCTATTAGGGGGATTAACCTTACGAAGCTTGAGTGCGAAGGGTATAGCAGTGCCTATAGTGTGGCTCCGCTGAAAGTTGATGGGCCTGGTGGGTGGTCCTATGGGATCCGCGTCAGGTATTCCGTGCAAGGGAATGATGAGTTCTGTGGGGCGTGTGAGGCCACTGCTGGCACGTGTGGATATGGCTCCGATGGGATTAGACAGGTCTGCATGTGTGGAGACTTCAATTCCACGTCAAATTGTGATTCTGTTGGCGTATCGTCAGGAGCAAGGGTTATATGTACGAGGGTAAAAATATTTTCAGGATTATTGACGTATGTGCTAGCGTGGGTGACAACCAACCAGATTTCAAAAGTGTGGTATATTATGTGA

>Glyma.05g039000.2 sequence-type=CDS polypeptide=Glyma.05g039000.2.p locus=Glyma.05g039000 id=Glyma.05g039000.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGCCCTCATTACTCTCCGCACTGTACCTCATTCTCTCAGCATACTTAATCCCTTTATGTTTGAGCCACCCCAACACATGCCGCTCATATTGCGGCAACATAACCATCGACTACCCGTTCGCACTCCAATACGGTTGCGGCCACCCCGGCTTCCGCGACCTCCTCTTCTGCATGAACGACGTTCTCATGTTCCACGTGAGCTCCGGCTCCTACAGGGTCCTCGAGATCGACTACGCCTACCAGGCCCTCACGCTCCACGAGCCCCACATGTCCACCTGCGACAACCTCGTCCTCGGAACCCGCGGCAACGGCTTCTCCGTCGAGCCCTGGCGCGCGCCATACATGAACCCTGCCGCCGACAACGTCTTCATGCTCATCGCCTGCTCCCCACGATCCCCCTTGTTCCAGGGCTTCCCCGGGAAGCACCTCCCCTGCCGCAACGTCTCTGGCATGGGCTGCGAGGACTACTACGCCTGCCCGGCCTGGGAGATGTTGGGCCACAAGAGATTGGGCTCAGCCTCGTTCTTTGGGTCAGGCCCACCCGAGTGCTGTGCTGTTCCGTACGAGGCTATTAGGGGGATTAACCTTACGAAGCTTGAGTGCGAAGGGTATAGCAGTGCCTATAGTGTGGCTCCGCTGAAAGTTGATGGGCCTGGTGGGTGGTCCTATGGGATCCGCGTCAGGTATTCCGTGCAAGGGAATGATGAGTTCTGTGGGGCGTGTGAGGCCACTGCTGGCACGTGTGGATATGGCTCCGATGGGATTAGACAGGTCTGCATGTGTGGAGACTTCAATTCCACGTCAAATTGTGATTCTGTTGGCGTATCGTCAGGAGCAAGGGTTATATGTACGAGGGTAAAAATATTTTCAGGTTACACAGCTTAG

>Glyma.05g039000.3 sequence-type=CDS polypeptide=Glyma.05g039000.3.p locus=Glyma.05g039000 id=Glyma.05g039000.3.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGCCCTCATTACTCTCCGCACTGTACCTCATTCTCTCAGCATACTTAATCCCTTTATGTTTGAGCCACCCCAACACATGCCGCTCATATTGCGGCAACATAACCATCGACTACCCGTTCGCACTCCAATACGGTTGCGGCCACCCCGGCTTCCGCGACCTCCTCTTCTGCATGAACGACGTTCTCATGTTCCACGTGAGCTCCGGCTCCTACAGGGTCCTCGAGATCGACTACGCCTACCAGGCCCTCACGCTCCACGAGCCCCACATGTCCACCTGCGACAACCTCGTCCTCGGAACCCGCGGCAACGGCTTCTCCGTCGAGCCCTGGCGCGCGCCATACATGAACCCTGCCGCCGACAACGTCTTCATGCTCATCGCCTGCTCCCCACGATCCCCCTTGTTCCAGGGCTTCCCCGGGAAGCACCTCCCCTGCCGCAACGTCTCTGGCATGGGCTGCGAGGACTACTACGCCTGCCCGGCCTGGGAGATGTTGGGCCACAAGAGATTGGGCTCAGCCTCGTTCTTTGGGTCAGGCCCACCCGAGTGCTGTGCTGTTCCGTACGAGGCTATTAGGGGGATTAACCTTACGAAGCTTGAGTGCGAAGGGTATAGCAGTGCCTATAGTGTGGCTCCGCTGAAAGTTGATGGGCCTGGTGGGTGGTCCTATGGGATCCGCGTCAGGTATTCCGTGCAAGGGAATGATGAGTTCTGTGGGGCGTGTGAGGCCACTGCTGGCACGTGTGGATATGGCTCCGATGGGATTAGACAGGTCTGCATGTGTGGAGACTTCAATTCCACGTCAAATTGTGATTCTGTTGGCGTATCGTCAGGAGCAAGGGTTATATGTACGAGGGTAAAAATATTTTCAGTTTTGTACCTTTTCAAGGTTTTTGGAACACCAAGAGAGGAAGAGCAAGTTGTCACAACAAATAAGACTTGCCCAGCAAGTGAGGTTGTTCTGAAGAGAACACATGGTAGCTCAAGAATGGAGGAAGAGGATTTAGGTGATCTTCACAACTTGCCCAACAAGTGTAGCTCACCCAGCGAGCAAAGCAAACTAAAGAGAGACTTTTGGAATTCACGAAGAACTCACCCAGGGAGTCTTACTTGCCCAACGAGTATTGCATCCTTTGAAGTGATAAGAAAAGGTCTTTAG

>Glyma.05g039000.4 sequence-type=CDS polypeptide=Glyma.05g039000.4.p locus=Glyma.05g039000 id=Glyma.05g039000.4.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGCCCTCATTACTCTCCGCACTGTACCTCATTCTCTCAGCATACTTAATCCCTTTATGTTTGAGCCACCCCAACACATGCCGCTCATATTGCGGCAACATAACCATCGACTACCCGTTCGCACTCCAATACGGTTGCGGCCACCCCGGCTTCCGCGACCTCCTCTTCTGCATGAACGACGTTCTCATGTTCCACGTGAGCTCCGGCTCCTACAGGGTCCTCGAGATCGACTACGCCTACCAGGCCCTCACGCTCCACGAGCCCCACATGTCCACCTGCGACAACCTCGTCCTCGGAACCCGCGGCAACGGCTTCTCCGTCGAGCCCTGGCGCGCGCCATACATGAACCCTGCCGCCGACAACGTCTTCATGCTCATCGCCTGCTCCCCACGATCCCCCTTGTTCCAGGGCTTCCCCGGGAAGCACCTCCCCTGCCGCAACGTCTCTGGCATGGGCTGCGAGGACTACTACGCCTGCCCGGCCTGGGAGATGTTGGGCCACAAGAGATTGGGCTCAGCCTCGTTCTTTGGGTCAGGCCCACCCGAGTGCTGTGCTGTTCCGTACGAGGCTATTAGGGGGATTAACCTTACGAAGCTTGAGTGCGAAGGGTATAGCAGTGCCTATAGTGTGGCTCCGCTGAAAGTTGATGGGCCTGGTGGGTGGTCCTATGGGATCCGCGTCAGGTATTCCGTGCAAGGGAATGATGAGTTCTGTGGGGCGTGTGAGGCCACTGCTGGCACGTGTGGATATGGCTCCGATGGGATTAGACAGGTCTGCATGTGTGGAGACTTCAATTCCACGTCAAATTGTGATTCTGTTGGCGTATCGTCAGGAGCAAGGGTTATATGTACGAGGGTAAAAATATTTTCAGGTATACGTGTCTATTTCATATTCTTTGTTCGGTTACTTGAGTTAGAAGTATATACTAATAAAAGTCTCTTTTCTTTATTTTGA

>Glyma.05g039000.5 sequence-type=CDS polypeptide=Glyma.05g039000.5.p locus=Glyma.05g039000 id=Glyma.05g039000.5.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGCCCTCATTACTCTCCGCACTGTACCTCATTCTCTCAGCATACTTAATCCCTTTATGTTTGAGCCACCCCAACACATGCCGCTCATATTGCGGCAACATAACCATCGACTACCCGTTCGCACTCCAATACGGTTGCGGCCACCCCGGCTTCCGCGACCTCCTCTTCTGCATGAACGACGTTCTCATGTTCCACGTGAGCTCCGGCTCCTACAGGGTCCTCGAGATCGACTACGCCTACCAGGCCCTCACGCTCCACGAGCCCCACATGTCCACCTGCGACAACCTCGTCCTCGGAACCCGCGGCAACGGCTTCTCCGTCGAGCCCTGGCGCGCGCCATACATGAACCCTGCCGCCGACAACGTCTTCATGCTCATCGCCTGCTCCCCACGATCCCCCTTGTTCCAGCAGGGCTTCCCCGGGAAGCACCTCCCCTGCCGCAACGTCTCTGGCATGGGCTGCGAGGACTACTACGCCTGCCCGGCCTGGGAGATGTTGGGCCACAAGAGATTGGGCTCAGCCTCGTTCTTTGGGTCAGGCCCACCCGAGTGCTGTGCTGTTCCGTACGAGGCTATTAGGGGGATTAACCTTACGAAGCTTGAGTGCGAAGGGTATAGCAGTGCCTATAGTGTGGCTCCGCTGAAAGTTGATGGGCCTGGTGGGTGGTCCTATGGGATCCGCGTCAGGTATTCCGTGCAAGGGAATGATGAGTTCTGTGGGGCGTGTGAGGCCACTGCTGGCACGTGTGGATATGGCTCCGATGGGATTAGACAGGTCTGCATGTGTGGAGACTTCAATTCCACGTCAAATTGTGATTCTGTTGGCGTATCGTCAGGAGCAAGGGTTATATGTACGAGGGTAAAAATATTTTCAGGATTATTGACGTATGTGCTAGCGTGGGTGACAACCAACCAGATTTCAAAAGTGTGGTATATTATGTGA
Predicted protein sequences of Glyma.05g039000
>Glyma.05g039000.1.p sequence-type=predicted peptide transcript=Glyma.05g039000.1 locus=Glyma.05g039000 id=Glyma.05g039000.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MPSLLSALYLILSAYLIPLCLSHPNTCRSYCGNITIDYPFALQYGCGHPGFRDLLFCMNDVLMFHVSSGSYRVLEIDYAYQALTLHEPHMSTCDNLVLGTRGNGFSVEPWRAPYMNPAADNVFMLIACSPRSPLFQGFPGKHLPCRNVSGMGCEDYYACPAWEMLGHKRLGSASFFGSGPPECCAVPYEAIRGINLTKLECEGYSSAYSVAPLKVDGPGGWSYGIRVRYSVQGNDEFCGACEATAGTCGYGSDGIRQVCMCGDFNSTSNCDSVGVSSGARVICTRVKIFSGLLTYVLAWVTTNQISKVWYIM*

>Glyma.05g039000.2.p sequence-type=predicted peptide transcript=Glyma.05g039000.2 locus=Glyma.05g039000 id=Glyma.05g039000.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MPSLLSALYLILSAYLIPLCLSHPNTCRSYCGNITIDYPFALQYGCGHPGFRDLLFCMNDVLMFHVSSGSYRVLEIDYAYQALTLHEPHMSTCDNLVLGTRGNGFSVEPWRAPYMNPAADNVFMLIACSPRSPLFQGFPGKHLPCRNVSGMGCEDYYACPAWEMLGHKRLGSASFFGSGPPECCAVPYEAIRGINLTKLECEGYSSAYSVAPLKVDGPGGWSYGIRVRYSVQGNDEFCGACEATAGTCGYGSDGIRQVCMCGDFNSTSNCDSVGVSSGARVICTRVKIFSGYTA*

>Glyma.05g039000.3.p sequence-type=predicted peptide transcript=Glyma.05g039000.3 locus=Glyma.05g039000 id=Glyma.05g039000.3.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MPSLLSALYLILSAYLIPLCLSHPNTCRSYCGNITIDYPFALQYGCGHPGFRDLLFCMNDVLMFHVSSGSYRVLEIDYAYQALTLHEPHMSTCDNLVLGTRGNGFSVEPWRAPYMNPAADNVFMLIACSPRSPLFQGFPGKHLPCRNVSGMGCEDYYACPAWEMLGHKRLGSASFFGSGPPECCAVPYEAIRGINLTKLECEGYSSAYSVAPLKVDGPGGWSYGIRVRYSVQGNDEFCGACEATAGTCGYGSDGIRQVCMCGDFNSTSNCDSVGVSSGARVICTRVKIFSVLYLFKVFGTPREEEQVVTTNKTCPASEVVLKRTHGSSRMEEEDLGDLHNLPNKCSSPSEQSKLKRDFWNSRRTHPGSLTCPTSIASFEVIRKGL*

>Glyma.05g039000.4.p sequence-type=predicted peptide transcript=Glyma.05g039000.4 locus=Glyma.05g039000 id=Glyma.05g039000.4.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MPSLLSALYLILSAYLIPLCLSHPNTCRSYCGNITIDYPFALQYGCGHPGFRDLLFCMNDVLMFHVSSGSYRVLEIDYAYQALTLHEPHMSTCDNLVLGTRGNGFSVEPWRAPYMNPAADNVFMLIACSPRSPLFQGFPGKHLPCRNVSGMGCEDYYACPAWEMLGHKRLGSASFFGSGPPECCAVPYEAIRGINLTKLECEGYSSAYSVAPLKVDGPGGWSYGIRVRYSVQGNDEFCGACEATAGTCGYGSDGIRQVCMCGDFNSTSNCDSVGVSSGARVICTRVKIFSGIRVYFIFFVRLLELEVYTNKSLFSLF*

>Glyma.05g039000.5.p sequence-type=predicted peptide transcript=Glyma.05g039000.5 locus=Glyma.05g039000 id=Glyma.05g039000.5.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MPSLLSALYLILSAYLIPLCLSHPNTCRSYCGNITIDYPFALQYGCGHPGFRDLLFCMNDVLMFHVSSGSYRVLEIDYAYQALTLHEPHMSTCDNLVLGTRGNGFSVEPWRAPYMNPAADNVFMLIACSPRSPLFQQGFPGKHLPCRNVSGMGCEDYYACPAWEMLGHKRLGSASFFGSGPPECCAVPYEAIRGINLTKLECEGYSSAYSVAPLKVDGPGGWSYGIRVRYSVQGNDEFCGACEATAGTCGYGSDGIRQVCMCGDFNSTSNCDSVGVSSGARVICTRVKIFSGLLTYVLAWVTTNQISKVWYIM*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo