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Report for Sequence Feature Glyma.05g035900

Feature Type:gene_model
Chromosome:Gm05
Start:3121433
stop:3126772
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.05g035900
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G11130.1AT RDR2,SMD1 JGI N/AIEA
2.7.7.48EC RNA-directed RNA polymerase JGI N/AIEA
GO:0003676GO-mf nucleic acid binding JGI N/AIEA
GO:0003968GO-mf RNA-directed 5'-3' RNA polymerase activity JGI N/AIEA
K11699KEGG Chromosome and associated proteins JGI N/AIEA
PTHR23079PantherFam RNA-DEPENDENT RNA POLYMERASE JGI N/AIEA
PTHR23079:SF5PantherFam RNA-DIRECTED RNA POLYMERASE JGI N/AIEA
PF00076Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) JGI N/AIEA
PF05183Pfam RNA dependent RNA polymerase JGI N/AIEA

Gene model name correspondences to Glyma.05g035900 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma05g02000 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.05g035900
>Glyma.05g035900.1 sequence-type=CDS polypeptide=Glyma.05g035900.1.p locus=Glyma.05g035900 id=Glyma.05g035900.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGCATGCAAATAGCATAAAAAACAATCTCTCACGAAAAAACTTTGAAAATGACCCATCTAAAAAAATAGTTTATAAAAGCACCCCAAATGCGAAAATTTGCCAGGTTTTGTTTGTGTTTGGAAGAAAACTGAACACATCACGAGACCCTTTTCCACCAACAGTCGCTGTGCCTGTGTTACTTACGCTCTCAGTCACTCTAGTAGGGAGCATCATCATGGGGACGACAACGACGACAACCCTTTCCAACACGGTTCGCGTGTCCAACATCCCCCAATCCGCGACCGCGAAGGACCTCCTCGACTTCCTCGAATCGACGGTGGGTCCCTCGACGGTGTTCGCCCTCGAAATCTTCTCCGACAACCCCAACTGGAAGTCCCGCGGCTTCGGCCGCGTCCAGTTCGAGACCCTCGACGCCAGGTCCCGCGCCCTCTCGCTCTCCCAACTCAACCACCTCCTCTTCCACCGCCACTTCCTCCGCCTCTCCGAAACCGACGCCGACATCATCTTCCGCCCCCAACACCGCCTTCATAACGGCGTCCTCTACGCCGGCTTCGTGCTCTCCGACCACCGCATGAGCGTCCTCGAATCCTGGGAGGGCGTCGCGGGCTGGGTCCTGCCCCTAAGGAAGAGGCTGGACTTCTGGGTGTGGCATAATGGCGACTGTTACAGACTCGAGTTTTTGTTTGAGGATATTTTGGAGTCTCATGGCTATTGTTTGGGAGAAGATGCCAAACTCAATGCCCTCCTCTTGAAGATGAAATTTGGGCCAAGGATTTATAAGAAAAAGACGGGGGCAGATGTGGCAGCCAAGTTTAGGGGAGATAGATACCGTTTTTGTAAGGAGGATTTTGAATTTCTTTGGGTGCGGACTACCGACTTCTCACCTCTCAAGTCAATTGGGCACTCTACTTCGTTTTGTTGGGAAATTGTGGAAGAACATTTAGCTTTGGATGTTTTTAAAAGTTTCCCACTCTACAAGGAAAATTTGAGAGATCTGGCTCTGGAAGACGGAGAAGAATTCTGTTCTTCGACAGAAGCAGTTCCGCTTGTAAAGCGTGCTTCACAATCCAAGTTACCTTATGAGGCTCTTTTCCAGCTGAATTCTCTTGTTCATACCCAGAAAATTAGTCTTGCTTCGGTGGATGATGAATTGATTGACTTGTTAGCAGGCTTAGATGAAGAAACTAGAGCTGTGATTTTTCTGAAATTGCACAAGATGAGCTTCACCTGTTATGAGCCTCTCAAATTTGTCAAGACTCAATTGCATGTGCTGAGTAACAAGAAAAAAGGTCTGCCACAATCGTCGCAGAAAAGGTTGACAGATAGTAACATTATGAGCTGTCATAGAGCCTTGATTACCCCCACAAAGATTTATTGCCTTGGTCCTGAGCTTGAAACCTCAAATCATGTGGTAAAGCACTTTGCTTCGCATGCATCGGACTTCATGAGGATTACCTTTGTCGAAGAGAATTGGAATAAGCTTCCAACTAATGCAGTATCAACTGGTGTGCAAAAGGGACTCTTTTCAAAGCCTTTGAAAACTGAAATATATAAGCGGATATTGACTATTCTCCGAGATGGGATTGTAATTGGCTCAAAGAGATTTGAGTTCCTGGCCTTCTCTGCTAGTCAGCTGCGATCAAATTCTGTTTGGTTGTTTGCTTCTAATGACAATCTGAAAGCAGCAGATATCAGAGAATGGATGGGATGCTTCAACAATATTCGCAGTGTTTCTAAATGTGCAGCGAGGATGGGTCAGTTGTTCAGTTCTTCCATGCAAACTTTTGAAGTGGTCTCTCAAGATGTGGAGATAATTCCGGATGTTGAAGTTATTTCTGATGGTGTAAGCTATTGTTTCTCAGATGGTATTGGAAAAATTTCCCAATCTTTTGCTAGGCAAGTTGCTCAAAAGCTAAAATTGGATCATACTCCATCAGCATTTCAAATTCGGTATGGAGGATTTAAAGGTGTCATTGCTGTTGATCGCCGTTCCTTTAGGAAGTTATCATTGCGTAGCAGCATGCTTAAGTTTGAATCCAAAAACAGCATGCTTTGTGTCACTAAATGGAGTGAGTCAATGCCTTGCTTTCTCAATCGAGAGATTATATCCCTGTTGTCTACATTAGGAGTAAAAGATGAGGTGCTTTTGGCAATGCAACATGACCAATTGGATTTGTTAGGAAGGATGCTGACTGATAGTAAAGCAGCTTTGGAAGTTTTGGAAAGTTTAAATGGAGCTGATTCAAAGAGCATTCTAGTGAAGATGTTGCATGAATTTAATGAGCCAAACAGTGAGCCTTACCTATCAATGATGCTCAAGGCTTATTATGCATACCAATTATCTGACTTGAAAAGTAGATGCCGAATATTTGTTCCCAAGGGTCGGGTCTTGGTAGGTTGCTTGGATGAAACTGGTCTTTTGAATTATGGCCAAGTATTTGTCCGCATAACCGTGACAAAAACTAGGGAAAAATTTGGAGATGAAAACCTAAGGAAAGTGGATGGGGATGATAACACATGTATAATAGTGGGAAAGGTGGTGGTCACCAAAAATCCTTGCCTTCACCCAGGAGACATCAGAGTCCTTGATGCTATCTACAGTGAAGAATTAGAGGAGAAGGGTTTGAGGGATTGCCTTGTATTTCCACAAAAAGGACATAGGCCTCATCCAAATGAATGCTCTGGAGGTGATCTCGATGGAGATTTGTTTTTCATAAGTTGGGACAAAGATCTAATCCCATGTCAAACTGAGGCTCCAATGGACTACACAGGAAGGAGGCCCCGTATAATGGACCATAAAGTGACCCTAGAGGAAATCCAACAATTCTTTGTTGATTACATGATCAATGATACTTTGGGTGCTATCTCTACTGCTCATCTAGTTCACGCTGACCGTGAACAAGATAAGGCCAAGAGTAGAAAATGTCTGGAATTGGCAGAGCTTCATTCCATGGCTGTCGACTTTGCAAAGACTGGAGCACCTGCTGCAATGCCTAGAGTTCTGAAACCAAGAGAGTTTCCAGATTTCATGGAGAGGGTTGACAAGCCTATGTACATCTCCAAGGGGGTACTGGGAAAACTTTATCGCGCCATAATTGAGTCACAAATGCAAATAAGATATAGCTTTGTGTGGTCAGAGAAGCATGCTGAAGAAGCATATGACCGTAGCCTTGAAGTGAATGGTTTTGAGGCCTTCCTTGAGACAGCATCAACTCACAAAGAAATGTATGCAGAGAAGATGAGCAGTTTAATGGACTTCTATGGTGCAGAGACCGAGGATGAAATGCTACTTGGTAACTTGCAAAACCGTGCTTCATATTTGCAGCGTGATAACAGGAGATATGGTGATATGAAGGATCGGATTCTGCTCTCAGTGAAGAACCTTCAGCGTGAAGCTAAAGAATGGTTTGAAACTAGTTGCGAACCGCATGAATATAAGCCTATGGCATCTGCATGGTATCATGTGACCTATCACCCCAGCTATTATTGCCGGGAAAGCCCATGCTTTCTAAGCTTTCCATGGATAGTTGGTGAGATTTTGCTGCAAATAAGGTCTGTGAGCAAAGGAGTTCACAAATGA

>Glyma.05g035900.2 sequence-type=CDS polypeptide=Glyma.05g035900.2.p locus=Glyma.05g035900 id=Glyma.05g035900.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGAAATTTGGGCCAAGGATTTATAAGAAAAAGACGGGGGCAGATGTGGCAGCCAAGTTTAGGGGAGATAGATACCGTTTTTGTAAGGAGGATTTTGAATTTCTTTGGGTGCGGACTACCGACTTCTCACCTCTCAAGTCAATTGGGCACTCTACTTCGTTTTGTTGGGAAATTGTGGAAGAACATTTAGCTTTGGATGTTTTTAAAAGTTTCCCACTCTACAAGGAAAATTTGAGAGATCTGGCTCTGGAAGACGGAGAAGAATTCTGTTCTTCGACAGAAGCAGTTCCGCTTGTAAAGCGTGCTTCACAATCCAAGTTACCTTATGAGGCTCTTTTCCAGCTGAATTCTCTTGTTCATACCCAGAAAATTAGTCTTGCTTCGGTGGATGATGAATTGATTGACTTGTTAGCAGGCTTAGATGAAGAAACTAGAGCTGTGATTTTTCTGAAATTGCACAAGATGAGCTTCACCTGTTATGAGCCTCTCAAATTTGTCAAGACTCAATTGCATGTGCTGAGTAACAAGAAAAAAGGTCTGCCACAATCGTCGCAGAAAAGGTTGACAGATAGTAACATTATGAGCTGTCATAGAGCCTTGATTACCCCCACAAAGATTTATTGCCTTGGTCCTGAGCTTGAAACCTCAAATCATGTGGTAAAGCACTTTGCTTCGCATGCATCGGACTTCATGAGGATTACCTTTGTCGAAGAGAATTGGAATAAGCTTCCAACTAATGCAGTATCAACTGGTGTGCAAAAGGGACTCTTTTCAAAGCCTTTGAAAACTGAAATATATAAGCGGATATTGACTATTCTCCGAGATGGGATTGTAATTGGCTCAAAGAGATTTGAGTTCCTGGCCTTCTCTGCTAGTCAGCTGCGATCAAATTCTGTTTGGTTGTTTGCTTCTAATGACAATCTGAAAGCAGCAGATATCAGAGAATGGATGGGATGCTTCAACAATATTCGCAGTGTTTCTAAATGTGCAGCGAGGATGGGTCAGTTGTTCAGTTCTTCCATGCAAACTTTTGAAGTGGTCTCTCAAGATGTGGAGATAATTCCGGATGTTGAAGTTATTTCTGATGGTGTAAGCTATTGTTTCTCAGATGGTATTGGAAAAATTTCCCAATCTTTTGCTAGGCAAGTTGCTCAAAAGCTAAAATTGGATCATACTCCATCAGCATTTCAAATTCGGTATGGAGGATTTAAAGGTGTCATTGCTGTTGATCGCCGTTCCTTTAGGAAGTTATCATTGCGTAGCAGCATGCTTAAGTTTGAATCCAAAAACAGCATGCTTTGTGTCACTAAATGGAGTGAGTCAATGCCTTGCTTTCTCAATCGAGAGATTATATCCCTGTTGTCTACATTAGGAGTAAAAGATGAGGTGCTTTTGGCAATGCAACATGACCAATTGGATTTGTTAGGAAGGATGCTGACTGATAGTAAAGCAGCTTTGGAAGTTTTGGAAAGTTTAAATGGAGCTGATTCAAAGAGCATTCTAGTGAAGATGTTGCATGAATTTAATGAGCCAAACAGTGAGCCTTACCTATCAATGATGCTCAAGGCTTATTATGCATACCAATTATCTGACTTGAAAAGTAGATGCCGAATATTTGTTCCCAAGGGTCGGGTCTTGGTAGGTTGCTTGGATGAAACTGGTCTTTTGAATTATGGCCAAGTATTTGTCCGCATAACCGTGACAAAAACTAGGGAAAAATTTGGAGATGAAAACCTAAGGAAAGTGGATGGGGATGATAACACATGTATAATAGTGGGAAAGGTGGTGGTCACCAAAAATCCTTGCCTTCACCCAGGAGACATCAGAGTCCTTGATGCTATCTACAGTGAAGAATTAGAGGAGAAGGGTTTGAGGGATTGCCTTGTATTTCCACAAAAAGGACATAGGCCTCATCCAAATGAATGCTCTGGAGGTGATCTCGATGGAGATTTGTTTTTCATAAGTTGGGACAAAGATCTAATCCCATGTCAAACTGAGGCTCCAATGGACTACACAGGAAGGAGGCCCCGTATAATGGACCATAAAGTGACCCTAGAGGAAATCCAACAATTCTTTGTTGATTACATGATCAATGATACTTTGGGTGCTATCTCTACTGCTCATCTAGTTCACGCTGACCGTGAACAAGATAAGGCCAAGAGTAGAAAATGTCTGGAATTGGCAGAGCTTCATTCCATGGCTGTCGACTTTGCAAAGACTGGAGCACCTGCTGCAATGCCTAGAGTTCTGAAACCAAGAGAGTTTCCAGATTTCATGGAGAGGGTTGACAAGCCTATGTACATCTCCAAGGGGGTACTGGGAAAACTTTATCGCGCCATAATTGAGTCACAAATGCAAATAAGATATAGCTTTGTGTGGTCAGAGAAGCATGCTGAAGAAGCATATGACCGTAGCCTTGAAGTGAATGGTTTTGAGGCCTTCCTTGAGACAGCATCAACTCACAAAGAAATGTATGCAGAGAAGATGAGCAGTTTAATGGACTTCTATGGTGCAGAGACCGAGGATGAAATGCTACTTGGTAACTTGCAAAACCGTGCTTCATATTTGCAGCGTGATAACAGGAGATATGGTGATATGAAGGATCGGATTCTGCTCTCAGTGAAGAACCTTCAGCGTGAAGCTAAAGAATGGTTTGAAACTAGTTGCGAACCGCATGAATATAAGCCTATGGCATCTGCATGGTATCATGTGACCTATCACCCCAGCTATTATTGCCGGGAAAGCCCATGCTTTCTAAGCTTTCCATGGATAGTTGGTGAGATTTTGCTGCAAATAAGGTCTGTGAGCAAAGGAGTTCACAAATGA
Predicted protein sequences of Glyma.05g035900
>Glyma.05g035900.1.p sequence-type=predicted peptide transcript=Glyma.05g035900.1 locus=Glyma.05g035900 id=Glyma.05g035900.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MHANSIKNNLSRKNFENDPSKKIVYKSTPNAKICQVLFVFGRKLNTSRDPFPPTVAVPVLLTLSVTLVGSIIMGTTTTTTLSNTVRVSNIPQSATAKDLLDFLESTVGPSTVFALEIFSDNPNWKSRGFGRVQFETLDARSRALSLSQLNHLLFHRHFLRLSETDADIIFRPQHRLHNGVLYAGFVLSDHRMSVLESWEGVAGWVLPLRKRLDFWVWHNGDCYRLEFLFEDILESHGYCLGEDAKLNALLLKMKFGPRIYKKKTGADVAAKFRGDRYRFCKEDFEFLWVRTTDFSPLKSIGHSTSFCWEIVEEHLALDVFKSFPLYKENLRDLALEDGEEFCSSTEAVPLVKRASQSKLPYEALFQLNSLVHTQKISLASVDDELIDLLAGLDEETRAVIFLKLHKMSFTCYEPLKFVKTQLHVLSNKKKGLPQSSQKRLTDSNIMSCHRALITPTKIYCLGPELETSNHVVKHFASHASDFMRITFVEENWNKLPTNAVSTGVQKGLFSKPLKTEIYKRILTILRDGIVIGSKRFEFLAFSASQLRSNSVWLFASNDNLKAADIREWMGCFNNIRSVSKCAARMGQLFSSSMQTFEVVSQDVEIIPDVEVISDGVSYCFSDGIGKISQSFARQVAQKLKLDHTPSAFQIRYGGFKGVIAVDRRSFRKLSLRSSMLKFESKNSMLCVTKWSESMPCFLNREIISLLSTLGVKDEVLLAMQHDQLDLLGRMLTDSKAALEVLESLNGADSKSILVKMLHEFNEPNSEPYLSMMLKAYYAYQLSDLKSRCRIFVPKGRVLVGCLDETGLLNYGQVFVRITVTKTREKFGDENLRKVDGDDNTCIIVGKVVVTKNPCLHPGDIRVLDAIYSEELEEKGLRDCLVFPQKGHRPHPNECSGGDLDGDLFFISWDKDLIPCQTEAPMDYTGRRPRIMDHKVTLEEIQQFFVDYMINDTLGAISTAHLVHADREQDKAKSRKCLELAELHSMAVDFAKTGAPAAMPRVLKPREFPDFMERVDKPMYISKGVLGKLYRAIIESQMQIRYSFVWSEKHAEEAYDRSLEVNGFEAFLETASTHKEMYAEKMSSLMDFYGAETEDEMLLGNLQNRASYLQRDNRRYGDMKDRILLSVKNLQREAKEWFETSCEPHEYKPMASAWYHVTYHPSYYCRESPCFLSFPWIVGEILLQIRSVSKGVHK*

>Glyma.05g035900.2.p sequence-type=predicted peptide transcript=Glyma.05g035900.2 locus=Glyma.05g035900 id=Glyma.05g035900.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MKFGPRIYKKKTGADVAAKFRGDRYRFCKEDFEFLWVRTTDFSPLKSIGHSTSFCWEIVEEHLALDVFKSFPLYKENLRDLALEDGEEFCSSTEAVPLVKRASQSKLPYEALFQLNSLVHTQKISLASVDDELIDLLAGLDEETRAVIFLKLHKMSFTCYEPLKFVKTQLHVLSNKKKGLPQSSQKRLTDSNIMSCHRALITPTKIYCLGPELETSNHVVKHFASHASDFMRITFVEENWNKLPTNAVSTGVQKGLFSKPLKTEIYKRILTILRDGIVIGSKRFEFLAFSASQLRSNSVWLFASNDNLKAADIREWMGCFNNIRSVSKCAARMGQLFSSSMQTFEVVSQDVEIIPDVEVISDGVSYCFSDGIGKISQSFARQVAQKLKLDHTPSAFQIRYGGFKGVIAVDRRSFRKLSLRSSMLKFESKNSMLCVTKWSESMPCFLNREIISLLSTLGVKDEVLLAMQHDQLDLLGRMLTDSKAALEVLESLNGADSKSILVKMLHEFNEPNSEPYLSMMLKAYYAYQLSDLKSRCRIFVPKGRVLVGCLDETGLLNYGQVFVRITVTKTREKFGDENLRKVDGDDNTCIIVGKVVVTKNPCLHPGDIRVLDAIYSEELEEKGLRDCLVFPQKGHRPHPNECSGGDLDGDLFFISWDKDLIPCQTEAPMDYTGRRPRIMDHKVTLEEIQQFFVDYMINDTLGAISTAHLVHADREQDKAKSRKCLELAELHSMAVDFAKTGAPAAMPRVLKPREFPDFMERVDKPMYISKGVLGKLYRAIIESQMQIRYSFVWSEKHAEEAYDRSLEVNGFEAFLETASTHKEMYAEKMSSLMDFYGAETEDEMLLGNLQNRASYLQRDNRRYGDMKDRILLSVKNLQREAKEWFETSCEPHEYKPMASAWYHVTYHPSYYCRESPCFLSFPWIVGEILLQIRSVSKGVHK*






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