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Report for Sequence Feature Glyma.05g035500

Feature Type:gene_model
Chromosome:Gm05
Start:3123293
stop:3124468
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.05g035500
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G40240.1AT nodulin MtN21 /EamA-like transporter family protein JGI N/AIEA
AT5G40240.2AT nodulin MtN21 /EamA-like transporter family protein JGI N/AIEA
GO:0006810GO-bp transport EnsemblGenomesN/AIEA
GO:0055085GO-bp transmembrane transport EnsemblGenomesN/AIEA
GO:0005886GO-cc plasma membrane EnsemblGenomesN/AIEA
GO:0016020GO-cc membrane EnsemblGenomesN/AIEA
GO:0016020GO-cc membrane JGI N/AIEA
GO:0016021GO-cc integral component of membrane EnsemblGenomesN/AIEA
GO:0022857GO-mf transmembrane transporter activity EnsemblGenomesN/AIEA
PF00892PFAM EamA-like transporter family JGI N/AIEA

Expression Patterns of Glyma.05g035500
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.05g035500 not represented in the dataset
Glyma.05g035500 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.05g035500 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma05g01956 Wm82.a1.v1.1IGC As supplied by JGI


Transcripts of Glyma.05g035500
>Glyma.05g035500.2 sequence-type=transcript locus=Glyma.05g035500 ID=Glyma.05g035500.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
GGCACAGTGCTGTCCATCGCTGGAGCATTACTAGTGACCCTTTACAAAGGAAGTCCCATCATCAGCTTTCGAACTCAACCCTCGCCAACACAACCATTGCCACCTTTGTTGGCTGAAACCAGTAACTGGGTTATTGGAGGTCTCTTCTTTGCCACTGCCTCTATTTCTCTTGCAGCCTGGAATATTACACAGGCAGCAATTCTGAAAGGATATTCATCTCAGTTAACCATATTAGCCTACTATTGCCTGTTTGGAACCATCCAAAGTGCAATACTTTCTCTCATTGTAGTCAGAGATCCAAATGACTGGAAAATAAGCCCTGACATTGATCTCATCGCTGTATTCTATTCAGCTGTTGTGGGAAGTGTGGTGACATTTTCTGTAAACACTTGGTGCATTAAAAAGAAAGGACCTGTATTTGTTAGCTTGTTCAAGCCTGTGGGGATTGCCATTGCTGCCTTTTCGACTGTTGTCTTCCTTGGTGAAACACTCCATGTTGGCAGTATTGTGGGCACAATCAAAAGGGGAAAACGCAAAAGGCTTCCAAGTTGATGGACTGTCATCCCCGTCTGCCCAAGCGAGTCCTCTACTCGAGTTCCATGAAAGCAATGTTTTAGCATAAGCATTTACCAGTGTCTAGTACTAGTAGTTCATCTTCGTCAATTTTTTCAACAAACACCGGTGTGGTGAAAGAATCATTACTTTTCAGGGGATTTTCTTTTACCAATCTATAGTTCTGTCTTGCATTGCCTGTCTGTATATATCACATTGGTGTAAGTAATGAAAACTCTTTACATTGCTCAGTTTCCTC

>Glyma.05g035500.3 sequence-type=transcript locus=Glyma.05g035500 ID=Glyma.05g035500.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
GGCACAGTGCTGTCCATCGCTGGAGCATTACTAGTGACCCTTTACAAAGGAAGTCCCATCATCAGCTTTCGAACTCAACCCTCGCCAACACAACCATTGCCACCTTTGTTGGCTGAAACCAGTAACTGGGTTATTGGAGGTCTCTTCTTTGCCACTGCCTCTATTTCTCTTGCAGCCTGGAATATTACACAGGCAGCAATTCTGAAAGGATATTCATCTCAGTTAACCATATTAGCCTACTATTGCCTGTTTGGAACCATCCAAAGTGCAATACTTTCTCTCATTGTAGTCAGAGATCCAAATGACTGGAAAATAAGCCCTGACATTGATCTCATCGCTGTATTCTATTCAGCTGTTGTGGGAAGTGTGGTGACATTTTCTGTAAACACTTGGTGCATTAAAAAGAAAGGACCTGTATTTGTTAGCTTGTTCAAGCCTGTGGGGATTGCCATTGCTGCCTTTTCGACTGTTGTCTTCCTTGGTGAAACACTCCATGTTGGCAGTGATAATTGCCATCGGATTTTACACAGTATTGTGGGCACAATCAAAAGGGGAAAACGCAAAAGGCTTCCAAGTTGATGGACTGTCATCCCCGTCTGCCCAAGCGAGTCCTCTACTCGAGTTCCATGAAAGCAATGTTTTAGCATAAGCATTTACCAGTGTCTAGTACTAGTAGTTCATCTTCGTCAATTTTTTCAACAAACACCGGTGTGGTGAAAGAATCATTACTTTTCAGGGGATTTTCTTTTACCAATCTATAGTTCTGTCTTGCATTGCCTGTCTGTATATATCACATTGGTGTAAGTAATGAAAACTCTTTACATTGCTCAGTTTCCTC
Coding sequences of Glyma.05g035500
>Glyma.05g035500.1 sequence-type=CDS polypeptide=Glyma.05g035500.1.p locus=Glyma.05g035500 ID=Glyma.05g035500.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
GGCACAGTGCTGTCCATCGCTGGAGCATTACTAGTGACCCTTTACAAAGGAAGTCCCATCATCAGCTTTCGAACTCAACCCTCGCCAACACAACCATTGCCACCTTTGTTGGCTGAAACCAGTAACTGGGTTATTGGAGGTCTCTTCTTTGCCACTGCCTCTATTTCTCTTGCAGCCTGGAATATTACACAGGCAGCAATTCTGAAAGGATATTCATCTCAGTTAACCATATTAGCCTACTATTGCCTGTTTGGAACCATCCAAAGTGCAATACTTTCTCTCATTGTAGTCAGAGATCCAAATGACTGGAAAATAAGCCCTGACATTGATCTCATCGCTGTATTCTATTCAGCTGTTGTGGGAAGTGTGGTGACATTTTCTGTAAACACTTGGTGCATTAAAAAGAAAGGACCTGTATTTGTTAGCTTGTTCAAGCCTGTGGGGATTGCCATTGCTGCCTTTTCGACTGTTGTCTTCCTTGGTGAAACACTCCATGTTGGCAGTGTTGTTGGTGCAGTGATAATTGCCATCGGATTTTACACAGTATTGTGGGCACAATCAAAAGGGGAAAACGCAAAAGGCTTCCAAGTTGATGGACTGTCATCCCCGTCTGCCCAAGCGAGTCCTCTACTCGAGTTCCATGAAAGCAATGTTTTAGCATAA

>Glyma.05g035500.2 sequence-type=CDS polypeptide=Glyma.05g035500.2.p locus=Glyma.05g035500 ID=Glyma.05g035500.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
GGCACAGTGCTGTCCATCGCTGGAGCATTACTAGTGACCCTTTACAAAGGAAGTCCCATCATCAGCTTTCGAACTCAACCCTCGCCAACACAACCATTGCCACCTTTGTTGGCTGAAACCAGTAACTGGGTTATTGGAGGTCTCTTCTTTGCCACTGCCTCTATTTCTCTTGCAGCCTGGAATATTACACAGGCAGCAATTCTGAAAGGATATTCATCTCAGTTAACCATATTAGCCTACTATTGCCTGTTTGGAACCATCCAAAGTGCAATACTTTCTCTCATTGTAGTCAGAGATCCAAATGACTGGAAAATAAGCCCTGACATTGATCTCATCGCTGTATTCTATTCAGCTGTTGTGGGAAGTGTGGTGACATTTTCTGTAAACACTTGGTGCATTAAAAAGAAAGGACCTGTATTTGTTAGCTTGTTCAAGCCTGTGGGGATTGCCATTGCTGCCTTTTCGACTGTTGTCTTCCTTGGTGAAACACTCCATGTTGGCAGTATTGTGGGCACAATCAAAAGGGGAAAACGCAAAAGGCTTCCAAGTTGA

>Glyma.05g035500.3 sequence-type=CDS polypeptide=Glyma.05g035500.3.p locus=Glyma.05g035500 ID=Glyma.05g035500.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
GGCACAGTGCTGTCCATCGCTGGAGCATTACTAGTGACCCTTTACAAAGGAAGTCCCATCATCAGCTTTCGAACTCAACCCTCGCCAACACAACCATTGCCACCTTTGTTGGCTGAAACCAGTAACTGGGTTATTGGAGGTCTCTTCTTTGCCACTGCCTCTATTTCTCTTGCAGCCTGGAATATTACACAGGCAGCAATTCTGAAAGGATATTCATCTCAGTTAACCATATTAGCCTACTATTGCCTGTTTGGAACCATCCAAAGTGCAATACTTTCTCTCATTGTAGTCAGAGATCCAAATGACTGGAAAATAAGCCCTGACATTGATCTCATCGCTGTATTCTATTCAGCTGTTGTGGGAAGTGTGGTGACATTTTCTGTAAACACTTGGTGCATTAAAAAGAAAGGACCTGTATTTGTTAGCTTGTTCAAGCCTGTGGGGATTGCCATTGCTGCCTTTTCGACTGTTGTCTTCCTTGGTGAAACACTCCATGTTGGCAGTGATAATTGCCATCGGATTTTACACAGTATTGTGGGCACAATCAAAAGGGGAAAACGCAAAAGGCTTCCAAGTTGA
Predicted protein sequences of Glyma.05g035500
>Glyma.05g035500.1.p sequence-type=predicted peptide transcript=Glyma.05g035500.1 locus=Glyma.05g035500 ID=Glyma.05g035500.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
GTVLSIAGALLVTLYKGSPIISFRTQPSPTQPLPPLLAETSNWVIGGLFFATASISLAAWNITQAAILKGYSSQLTILAYYCLFGTIQSAILSLIVVRDPNDWKISPDIDLIAVFYSAVVGSVVTFSVNTWCIKKKGPVFVSLFKPVGIAIAAFSTVVFLGETLHVGSVVGAVIIAIGFYTVLWAQSKGENAKGFQVDGLSSPSAQASPLLEFHESNVLA*

>Glyma.05g035500.2.p sequence-type=predicted peptide transcript=Glyma.05g035500.2 locus=Glyma.05g035500 ID=Glyma.05g035500.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
GTVLSIAGALLVTLYKGSPIISFRTQPSPTQPLPPLLAETSNWVIGGLFFATASISLAAWNITQAAILKGYSSQLTILAYYCLFGTIQSAILSLIVVRDPNDWKISPDIDLIAVFYSAVVGSVVTFSVNTWCIKKKGPVFVSLFKPVGIAIAAFSTVVFLGETLHVGSIVGTIKRGKRKRLPS*

>Glyma.05g035500.3.p sequence-type=predicted peptide transcript=Glyma.05g035500.3 locus=Glyma.05g035500 ID=Glyma.05g035500.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
GTVLSIAGALLVTLYKGSPIISFRTQPSPTQPLPPLLAETSNWVIGGLFFATASISLAAWNITQAAILKGYSSQLTILAYYCLFGTIQSAILSLIVVRDPNDWKISPDIDLIAVFYSAVVGSVVTFSVNTWCIKKKGPVFVSLFKPVGIAIAAFSTVVFLGETLHVGSDNCHRILHSIVGTIKRGKRKRLPS*






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