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Report for Sequence Feature Glyma.05g033500

Feature Type:gene_model
Chromosome:Gm05
Start:2908499
stop:2912457
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.05g033500
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G74920.1AT aldehyde dehydrogenase 10A8 JGI N/AIEA
GO:0008152GO-bp metabolic process EnsemblGenomesN/AIEA
GO:0008152GO-bp metabolic process JGI N/AIEA
GO:0055114GO-bp oxidation-reduction process EnsemblGenomesN/AIEA
GO:0055114GO-bp oxidation-reduction process JGI N/AIEA
GO:0016491GO-mf oxidoreductase activity EnsemblGenomesN/AIEA
GO:0016491GO-mf oxidoreductase activity JGI N/AIEA
GO:0016620GO-mf oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor EnsemblGenomesN/AIEA
KOG2450 KOG Aldehyde dehydrogenase JGI N/AIEA
PTHR11699Panther ALDEHYDE DEHYDROGENASE-RELATED JGI N/AIEA
PTHR11699:SF45Panther JGI N/AIEA
PF00171PFAM Aldehyde dehydrogenase family JGI N/AIEA
PWY-2SoyCyc9 putrescine degradation IV Plant Metabolic Network ISS
PWY1F-353SoyCyc9 glycine betaine biosynthesis III (plants) Plant Metabolic Network ISS
GN7V-48797SoyCyc9-rxn Enzyme name not determined Plant Metabolic Network ISS

Proteins Associated with Glyma.05g033500
LocusGene SymbolProtein Name
ALDH10A1 betaine aldehyde dehydrogenase

Expression Patterns of Glyma.05g033500
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.05g033500 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma05g01770 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.05g033500
>Glyma.05g033500.1 sequence-type=CDS polypeptide=Glyma.05g033500.1.p locus=Glyma.05g033500 ID=Glyma.05g033500.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGAGCATCCCAATTCCCCATCGGCAGTTATTCATAGACGGAGACTGGAAAGTCCCCGTCCTCAAGAATCGGATTCCCATCATCAACCCTTCCACCCAACACATCATCGGGGATATCCCAGCAGCTACTAAGGAAGACGTTGATCTCGCTGTCGCTGCCGCCAAAGCTGCCCTCTCCCGCAACAAGGGCGCCGATTGGGCCTCCGCTTCCGGCTCCGTTCGGGCTCGCTACCTCCGCGCCATCGCTGCCAAGATCACCGAGAAAAAGCCTGAACTAGCAAAACTCGAAGCTATTGACTGTGGAAAACCGCTCGATGAAGCCGCCTGGGACATCGACGATGTTGCTGGTTGCTTTGAGTTCTATGCTGACCTTGCTGAAAAATTGGACGCACAGCAAAAGGCTCATGTGTCTCTTCCCATGGACACATTCAAGAGTTATGTTCTTAAGGAGCCGATTGGAGTCGTTGCTTTAATAACTCCTTGGAATTATCCTCTGTTGATGGCTACGTGGAAGGTTGCTCCTGCTCTGGCGGCCGGCTGTGCTGCAATATTGAAGCCCTCTGAGTTGGCATCTGTGACATGTTTGGAGCTCGCTGAAATTTGCAAAGAAGTCGGGCTTCCTCCTGGCGTGTTGAACATTCTCACTGGATTAGGACCTGAAGCGGGTGCTCCTTTAGCAGCTCATCCCGATGTAGACAAGATTGCCTTTACTGGAAGCTCTGCAACTGGGAGCAAAATTATGACAGCTGCAGCTCAGCTGATCAAGCCTGTTTCACTAGAGCTTGGTGGGAAAAGCCCAATCATTGTTTTTGAGGATGTTGACCTTGACAAGGCTGCTGAATGGACCATATTTGGTTGCTTCTGGACAAATGGTCAGATATGCAGTGCAACTTCCCGCCTTATTGAAAGTATAGCAACAGAATTTTTGAATAGGATTGTGAAATGGGTCAAAAACATCAAAATTTCTGATCCCTTGGAAGAAGGTTGCAGACTAGGCCCTATTGTTAGTGAAGGACAGTATGAAAAGATATTGAAGTTTATCTCAAATGCTAAGAGTGAGGGTGCAACCATTTTGACTGGTGGGTCTCGCCCAGAGCATCTAAAGAAGGGATTCTTTGTTGACCAACTAGAAGAAGTATTTGGACCAGTTCTCTGTGTAAAAACATTTAGCACTGAGGAAGAAGCTATTGATCTAGCAAATGACACTGTATATGGCTTGGGTTCTGCTGTAATATCAAATGATCTAGAAAGATGTGAGCGCATTACTAAGGCTTTTAAGGCTGGAATTGTGTGGATTAATTGCTCTCAACCATGCTTCACTCAAGCCCCATGGGGAGGCATTAAACGCAGTGGTTTTGGTCGTGAATTAGGAGAATGGGGACTTGATAATTACTTGAGTGTGAAGCAAGTGACCCAATATATCTCTGATGAACCGTGGGGCTGGTACCAGTCTCCTTCAAGGCTGTGA
Predicted protein sequences of Glyma.05g033500
>Glyma.05g033500.1.p sequence-type=predicted peptide transcript=Glyma.05g033500.1 locus=Glyma.05g033500 ID=Glyma.05g033500.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MSIPIPHRQLFIDGDWKVPVLKNRIPIINPSTQHIIGDIPAATKEDVDLAVAAAKAALSRNKGADWASASGSVRARYLRAIAAKITEKKPELAKLEAIDCGKPLDEAAWDIDDVAGCFEFYADLAEKLDAQQKAHVSLPMDTFKSYVLKEPIGVVALITPWNYPLLMATWKVAPALAAGCAAILKPSELASVTCLELAEICKEVGLPPGVLNILTGLGPEAGAPLAAHPDVDKIAFTGSSATGSKIMTAAAQLIKPVSLELGGKSPIIVFEDVDLDKAAEWTIFGCFWTNGQICSATSRLIESIATEFLNRIVKWVKNIKISDPLEEGCRLGPIVSEGQYEKILKFISNAKSEGATILTGGSRPEHLKKGFFVDQLEEVFGPVLCVKTFSTEEEAIDLANDTVYGLGSAVISNDLERCERITKAFKAGIVWINCSQPCFTQAPWGGIKRSGFGRELGEWGLDNYLSVKQVTQYISDEPWGWYQSPSRL*






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