SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.05g025900

Feature Type:gene_model
Chromosome:Gm05
Start:2264224
stop:2266891
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.05g025900
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G47500.1AT CDF3 JGI N/AIEA
GO:0006355GO-bp regulation of transcription, DNA-templated JGI N/AIEA
GO:0003677GO-mf DNA binding JGI N/AIEA
PTHR31089PantherFam CYCLIC DOF FACTOR 2 JGI N/AIEA
PF02701Pfam Dof domain, zinc finger JGI N/AIEA

Proteins Associated with Glyma.05g025900
LocusGene SymbolProtein Name
CDF3c Cycling Dof Factor 3 gene c

Gene model name correspondences to Glyma.05g025900 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma05g00970 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.05g025900
>Glyma.05g025900.1 sequence-type=CDS polypeptide=Glyma.05g025900.1.p locus=Glyma.05g025900 id=Glyma.05g025900.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGCACGAAATTAGAGACCCTGCAATTAGGCTTTTCGGTCAGAAGATCCCTTTCCCTGAAGATGTTGTTGTTGACAAAGAAGAAAAAGAAATAGAAAGTGGCGAGGAAAGAGAACAAGAGATGGAAAAATATGAAGACCAAGGACACAAGGATGCTGGAGTTGAAAATGTTACTGAGGAAGAGCTAGAAGTTGATCCTCCTCCAAATGCTGAAGAGACTAAGAATTCAGGCTCATCCCCTGAGGCTATTGTGAACCCCAAAACACCTTCCATAGAAGAAGAAACAGAAAAATCAAAAGGTGACAAAACAGAGAAGGAACAAGGTGATGCAGCCAACTCACAAGAGAAAACCCTGAAGAAGCCAGATAAAGTGCTACCATGCCCCCGCTGCAAAAGCATGGACACTAAATTCTGTTACTACAACAACTACAATGTCAACCAGCCGCGTTATTTCTGCAAAGCCTGTCAAAGATACTGGACTGCAGGTGGCACCATGAGGAATGTTCCTGTGGGGGCAGGACGGCGAAAGAACAAGAACTCTACCTCCCATTATCGCCACATCACTATCTCTGAGGCCCTTCAAGCAGCTAGAATTGATTCTCATCTTCCACCTTTGAAAGGCAATGGTAGAGTCCTCAGCTTTGGATTAGATGCACATGCACCTATTTGTGATTCCATGGCATCTGTCAACAATCTTGGAGAGAAAAAGCCTCTCAATTGCACAAGAAATGGGTTTCATCATGGCTTTGAGGATCAAAGACTCCCCCCCGTTCCTTGCAAAAGTGGGGAAAATGGTGATGACTCTTCAACTACATCCTCCATCACAGTTTCAAGTTCCAAGGGAGAAAATAACAAAAACACCTTCCAACAACAATCAGTGCCCCAAAATCATGGTTTCCTTCCTCAACTTCCATGTATTCCTGGTGTTTCTTGGCCCTATACATGGAATTCTCCAGTTCCTCCACCTGCTATGTGTCCTTCAGGATTTCCCCTACCATTCTATCCTGCTACATTTTGGAACTGTGGCATGCCAGGGAATTGGAATGTTCCATTGTTTTCCTCACATTCATCTGCTTCAAACCTCGAGTCTCGAAGCTCCAGTCCAAATTCTCCAACTTTGGGGAAGCACTCGCGCGACGGTGACATGATTAAGCAATACTCTTTGCCTAAAGAAGAAGCTTCAAAGCCAAGAAACGGGGGTGTTTTGGTTCCCAAAACGTTGAGAATTGATGATCCAAGTGAGGCTGCAAAGAGTTCTATATGGGCAACTCTAGGAATTAAGAATGAGTCAGTGAGTGGTGGAGGTATGTTTAAGGCCTTCCAATCAAAGAAAAATGAAAAGAATCATGTTGAAGCCTCTCCATTGTTGATGGCTAACCCTGCAGCTTTATCTAGATCCCTCAATTTTCATGAAAACTCCTGA
Predicted protein sequences of Glyma.05g025900
>Glyma.05g025900.1.p sequence-type=predicted peptide transcript=Glyma.05g025900.1 locus=Glyma.05g025900 id=Glyma.05g025900.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MHEIRDPAIRLFGQKIPFPEDVVVDKEEKEIESGEEREQEMEKYEDQGHKDAGVENVTEEELEVDPPPNAEETKNSGSSPEAIVNPKTPSIEEETEKSKGDKTEKEQGDAANSQEKTLKKPDKVLPCPRCKSMDTKFCYYNNYNVNQPRYFCKACQRYWTAGGTMRNVPVGAGRRKNKNSTSHYRHITISEALQAARIDSHLPPLKGNGRVLSFGLDAHAPICDSMASVNNLGEKKPLNCTRNGFHHGFEDQRLPPVPCKSGENGDDSSTTSSITVSSSKGENNKNTFQQQSVPQNHGFLPQLPCIPGVSWPYTWNSPVPPPAMCPSGFPLPFYPATFWNCGMPGNWNVPLFSSHSSASNLESRSSSPNSPTLGKHSRDGDMIKQYSLPKEEASKPRNGGVLVPKTLRIDDPSEAAKSSIWATLGIKNESVSGGGMFKAFQSKKNEKNHVEASPLLMANPAALSRSLNFHENS*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo