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Report for Sequence Feature Glyma.05g021400

Feature Type:gene_model
Chromosome:Gm05
Start:1894075
stop:1900832
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.05g021400
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G61060.1AT ATHDA5,HDA05,HDA5 JGI N/AIEA
3.5.1.98EC histone deacetylase JGI N/AIEA
K11407KEGG Chromosome and associated proteins JGI N/AIEA
KOG1342 KOG Histone deacetylase complex, catalytic component RPD3 JGI N/AIEA
PF00850Pfam Histone deacetylase domain JGI N/AIEA

Proteins Associated with Glyma.05g021400
LocusGene SymbolProtein Name
HDA6 histone deacetylase

Gene model name correspondences to Glyma.05g021400 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma05g00460 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.05g021400
>Glyma.05g021400.1 sequence-type=CDS polypeptide=Glyma.05g021400.1.p locus=Glyma.05g021400 id=Glyma.05g021400.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGAACGTGAAAACGACAACAGCGCCAAAAGCAGTGTCAACGGTCAGCGCCGCGTGGGTTTACTCTACGACGAGAGGATGTGCAAGCACCACACACCAGACGACGAGGACCATCCCGAGACCCCCAATCGCATCAGAGCTATTTGGAACAAACTCCAAAGCACCGGCGTTCCCCAACGATGCGTGATTTTGGAGGCCAAAGAAGCTGAGGACAAACATCTACTGTTAGTGCATTCTGAAAATCATGTTAATCTGATTAAGAACATCAGCTCAAAGCAGTTCAATTCGCGGAGGCATAAGATTGCCTCAAAATTGGATTCCATATATTTTAATGAAGGTTCATCGGAAGCTGCGTACCTTGCTGCTGGCTCTGCAGTAGAGGTTGTTGAAAGAGTGGCAAGCAGGGAATTGGATTCTGCTGTTGCCATTGTTAGGCCTCCAGGTCATCATGCAGAACAAAATGAAGCTATGGGATTCTGTCTGTTCAACAATGTGGCAGTTGCTGCAAGATATCTCTTAGATGAAAGACCAGAATTAGGTGTGAAGAAAATATTAATTGTTGATTGGGATGTCCATCATGGAAATGGTACTCAGAAAATGTTCTGGAATGATTCTCGAGTTTTATTCTTTTCCGTTCACAGGCATGAGTTTGGGAGTTTTTATCCAGCTAATGATGATGGATTTTATACCATGATTGGAGAAGGAGCAGGTGCTGGATATAATATAAATGTCCCCTGGGAGAATGGGCGATGTGGTGATGCAGATTACTTTGCAGTGTGGGACCACATCTTGCTTCCTGTTGCTAAAGAATTTAATCCAGACATAATTATAGTTTCTGCTGGATTTGATGCAGCTGTTGGTGACCCTCTGGGAGGATGCCGTGTCACACCATTTGGTTATTCTGTTCTGTTAGAGAAGTTGATGAATTTTGCTGAAGGTAGGATTGTACTGATTTTAGAAGGAGGATATAACCTTGATTCCATCGCAAAATCAATGCATGCCTGCTTGGAAGTTTTGCTAGAGGACAAGCCTGTTATTGGATCCTCAGAGGCCTATCCATTTGAATCTACGTGGCGTGTGATTAAAGCGGTTCTCCTGGAGTTAAGTCCCTTTTGGCCTACACTTGCATGTGAATTACCGCAAAAGTTAATCTCACAAATGGCACCACCTCCGCATACTCTTGTCTCAAGCTCTGACTCTGAGGCTGAGGATGATAAGGGTGCACCAAGTTCAGAAAATTTTGTTGAACTTCTTGAGGATGTCATAAAACCACTTTCCAAACTGAAAGTTGATGCTGATGAAGATACTGATGTTTCTAGTACTTGGCGATCTGAATTGTCAAATGTTTATATATGGTATGCCTCATATGGATCAAATATGTGGAAGGCAAGATTAAATTGCTACCTAGCAGGTGGACAGGTGGAAGGTATGCAGAAGGGGTGTTCTGGTTCAGTGAATAGAACTCTGCCAAAAGAGATCCTGTGGAAGACTTTCCCTTGTCATATATTTTTTGGTCGTGATTCATCACATTCATGGGGTATGGGAGGCGTTGCATTTCTTAATCCTGAGAAAAGTTTTCAGCACAACACCTATATGTGCCTGTACAAAATTTCGCTAGAGCAGTTCAATGATATTTTGTTTCAGGAAAATGGTTTAAGCCTTGATGCGGGCTCTCCTTTATTTGATATAACTACTCTGAATGCTATCTCTTACAAGGAGTTCCACTCTCTGGAGGTTGTCAAGGGTGCTTGGTATGGCAATGTTGTCTACTTAGGAAAGGAGCTGGATATTCCAGTAATTACCATGACGTGTTCTCTTCTTGATATTGAACGTTTCAAATCTGGGAAGCTACCATTGCGTGCCCCTAATAAAGCGTATGCAAACACCTTAATAAAAGGGTTGGTAGATGGAGAACAGCTTTCAGAGGTGGAAGCCATCGCTTACATAGAAGGTGCTGCTAAATCATTGTAG
Predicted protein sequences of Glyma.05g021400
>Glyma.05g021400.1.p sequence-type=predicted peptide transcript=Glyma.05g021400.1 locus=Glyma.05g021400 id=Glyma.05g021400.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MERENDNSAKSSVNGQRRVGLLYDERMCKHHTPDDEDHPETPNRIRAIWNKLQSTGVPQRCVILEAKEAEDKHLLLVHSENHVNLIKNISSKQFNSRRHKIASKLDSIYFNEGSSEAAYLAAGSAVEVVERVASRELDSAVAIVRPPGHHAEQNEAMGFCLFNNVAVAARYLLDERPELGVKKILIVDWDVHHGNGTQKMFWNDSRVLFFSVHRHEFGSFYPANDDGFYTMIGEGAGAGYNINVPWENGRCGDADYFAVWDHILLPVAKEFNPDIIIVSAGFDAAVGDPLGGCRVTPFGYSVLLEKLMNFAEGRIVLILEGGYNLDSIAKSMHACLEVLLEDKPVIGSSEAYPFESTWRVIKAVLLELSPFWPTLACELPQKLISQMAPPPHTLVSSSDSEAEDDKGAPSSENFVELLEDVIKPLSKLKVDADEDTDVSSTWRSELSNVYIWYASYGSNMWKARLNCYLAGGQVEGMQKGCSGSVNRTLPKEILWKTFPCHIFFGRDSSHSWGMGGVAFLNPEKSFQHNTYMCLYKISLEQFNDILFQENGLSLDAGSPLFDITTLNAISYKEFHSLEVVKGAWYGNVVYLGKELDIPVITMTCSLLDIERFKSGKLPLRAPNKAYANTLIKGLVDGEQLSEVEAIAYIEGAAKSL*






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