SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.05g019500

Feature Type:gene_model
Chromosome:Gm05
Start:1740235
stop:1747449
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.05g019500
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G18600.1AT ATRBL12,RBL12 JGI N/AIEA
3.4.21.105EC rhomboid protease JGI N/AIEA
GO:0006508GO-bp proteolysis JGI N/AIEA
GO:0016021GO-cc integral component of membrane JGI N/AIEA
GO:0004252GO-mf serine-type endopeptidase activity JGI N/AIEA
KOG2980 KOG Integral membrane protease of the rhomboid family involved in different forms of regulated intramembrane proteolysis JGI N/AIEA
PTHR22936PantherFam RHOMBOID-RELATED JGI N/AIEA
PF01694Pfam Rhomboid family JGI N/AIEA

Gene model name correspondences to Glyma.05g019500 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma05g00250 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.05g019500
>Glyma.05g019500.1 sequence-type=CDS polypeptide=Glyma.05g019500.1.p locus=Glyma.05g019500 id=Glyma.05g019500.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGCAGGGTTTAATTCGCAAACTGGTGGCACAGGTACAGGCACAGCATCCCCTTCGCAACACCAACTCTCACCACCGTATCTTCAACACTCACAGCGCCTTCTCCTCTGTTCCCAAACCTTCGCAACCCCAACTGCATCAAGTGAACCACATTCACTCTCCCTTCCTCACTCACCCACTTCATCATTTTCACTCATGCCGCTCCTTTTCCACCAAATTTCGCGCCTTTCTCTCCCAACCAATGATCTCGCGTCACTTCGCCTTCAATCCTCTCCTCAGGGTCTCTGCCAGAAGCCTCCAAATCGGTTGCAGGCCCAGTCTTCATTATTTTATTCGACACAACTTCAATTTCAGCCATAATCACGATTTTTCTCGGCGTTCTTGGAGATCATGGCTCCGTGGGCTAACAGCTAATGACATGGTTTTGGGCTTGATTATAGCTAATGTTGCTATTTTTTTATTGTGGAGGATAGCAGATCAAAATTTTATGATAAAGAACTTTACTATCTCTTTGGACAATTTTAAGAGTGGACGTTTGCACACTTTGATTACCAATGCATTCAGTCATGTAGATACCTGGCATATAGTTTCCAACATGATTGGACTCTACTTCTTTGGAATGAATATTGGAAGAAATTTTGGACCTGAATTTCTGCTGAAGTTGTATCTTGCTGGGGCAGTTGGTGGCTCTGTTTTTTACTTGATCCATCAGGCCTATAAAGCACAAACATCAAAGGACTGGAGAACTATGATTGTTTCAAAGGAATTAGCATTGGGGGCAAGTGGAGCTGTAAATGCAGTTATGCTACTTGACATATTTCTCTTTCCAAAAGCAACCCTTTACCTTGACTTTTTTATACCAGTTCCCGCGGTCTTGCTGGGTATCTTTTTGATTGGGAAAGATATGCTAAGGATACTTGAGGGAAACAGTCAAATATCAGGATCTGCACATTTGGGAGGTGCTGCTGTTGCAGCCATAGCTTGGGCAGGGGTTCGGAAAGGAAGATTCTAA
Predicted protein sequences of Glyma.05g019500
>Glyma.05g019500.1.p sequence-type=predicted peptide transcript=Glyma.05g019500.1 locus=Glyma.05g019500 id=Glyma.05g019500.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MQGLIRKLVAQVQAQHPLRNTNSHHRIFNTHSAFSSVPKPSQPQLHQVNHIHSPFLTHPLHHFHSCRSFSTKFRAFLSQPMISRHFAFNPLLRVSARSLQIGCRPSLHYFIRHNFNFSHNHDFSRRSWRSWLRGLTANDMVLGLIIANVAIFLLWRIADQNFMIKNFTISLDNFKSGRLHTLITNAFSHVDTWHIVSNMIGLYFFGMNIGRNFGPEFLLKLYLAGAVGGSVFYLIHQAYKAQTSKDWRTMIVSKELALGASGAVNAVMLLDIFLFPKATLYLDFFIPVPAVLLGIFLIGKDMLRILEGNSQISGSAHLGGAAVAAIAWAGVRKGRF*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo