SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research



Report for Sequence Feature Glyma.05g015200

Feature Type:gene_model
Chromosome:Gm05
Start:1390091
stop:1401943
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G23080.1AT TGH JGI N/AIEA
GO:0006396GO-bp RNA processing JGI N/AIEA
GO:0003723GO-mf RNA binding JGI N/AIEA
K13123KEGG Spliceosome JGI N/AIEA
KOG2138 KOG Predicted RNA binding protein, contains G-patch domain JGI N/AIEA
PTHR13384PantherFam G PATCH DOMAIN-CONTAINING PROTEIN 1 JGI N/AIEA
PTHR13384:SF19PantherFam G PATCH DOMAIN-CONTAINING PROTEIN 1 JGI N/AIEA
PF01805Pfam Surp module JGI N/AIEA
PF07713Pfam Protein of unknown function (DUF1604) JGI N/AIEA

Corresponding NameAnnotation VersionEvidenceComments
Glyma05g07740 Wm82.a1.v1.1IGC As supplied by JGI


>Glyma.05g015200.1 sequence-type=CDS polypeptide=Glyma.05g015200.1.p locus=Glyma.05g015200 id=Glyma.05g015200.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGAGTCAGATGAAGACGATTTTGTTTTCTACGGAACGCCGATAGAGCGTGAGGATGATTCAATCAGTCGCAAGAAGAAGGCCATTGCCGAGTCCTCCGGTCAGCTCCGAACTCTCCCCGCTTGGAAGCAAGAGGTTAGAGATGAGGAAGGGCGGAGAAGATTCCATGGAGCGTTTACAGGAGGCTATTCTGCGGGTTACTATAATACAGTGGGCTCAAAGGAAGGGTGGGCACCTCAGTCATTTAAATCATCAAGGAAGAACAGGGCTGAATTCAAAGAGCAGAACATACTGAATTTTCTAGATGAAGATGAGAAAACTGAATTGGAAGGTCGTTTTTTGGGGACAACCTCACAGTTTGACACATTTGGTTTCACAGCTGCTGAAATTGCTCGCAAACAAGCTGAGAAGGAACAGAAACAGAGGCCATCCATAATTCCTGGACCTGCTCCTGATGAAATAGTTGTTCCAGCCACTGAATCTGTTGGGGTAAAACTGCTCTTGAAGATGGGATGGAGTCATGGTCGCTCAATCAAGGATTCACATTCTGAGGCACTGTATGATGCCAGAAGACAGGCCCGTAGAGCTTTCTTAGCATTTTCTTCTGATGATCCAAAAGTGAAGATTACTGAGACTGAACCCATCGAGGGTGATACTGAAAATTTTCCTGAGGAACCTGTGAATGACGATGTTTGGTTTTCTAAGAGCACACCTGTTTACGTACTTAACCCAAAGCAAGACCTGCATGGATTAGGTTTTGATCCTTATAAGCATGCTCCTGAGTTTAGAGAGAAAAAAAGATCACGCTTAGCCAGCAAGGGGGGACCTGGCTTCTCCACTAGAGATGGTCTTTTTGGTTTGAAGTCAGGAAAGGCTGCCCCCGGTTTTGGTATTGGAGCTCTTGAGGAGCTTGATGCAGAGGATGAGGATGTCTATGCCACTGGTTACGAATTTGAAGATGCTTATGTTCAAGAAGTTGAAGAACCTTTGACATTGAGATTAGAAAACCAGAGAAAAGAAGTTGAAGAACCTTCGACGCTGAGATTAGAAAGCCATAGAAAAAAAGAGCAGAAGGACCAGGGTGATCTGCCTGGTTTTAGAGTTGCATCCAATTCTGACTATAAAATGGAAAGATTTGAGGCTCCTCTGATCCCTAAGGATTTTGTGCCCCACCATGAATTTTCTGGACCTCTCGACATTAACCGCAAGAGCTATGAAGTCAATCCACCAGATGTTCCTCCTCCAGAGGATGGAAATTTAAAACTATTAATTGAGGGGGTTGCAAATCTGGTAGCTAAATGTGGTAAATTATATGAGGATTTATCAAGAGAAAAGAATCAATCAAATCCGTTGTTTAATTTTCTTTCTGGAGGAACTGGCCATGAATATTATGCAAGGAAATTGTGGGAGGCACAACAGAAACACAATAATCAGACTAGTCGGCAATTGGATAGAAAAATGCCTCCCAGTGTGCAGAGGCTAACAGCTGAGAGTCGAGGCCAGATCTTAGGGGAAAAACCTCTAGAAAAAAGCTCCCAAGATCTATCCTCGTCTGTTGCTTCTACAGATATTCATCTCCAATTTAATCTTACTGATACATTTATCGAGTCTGCATCACTTAGTGAGTTAATGAATGTGGAAAAGCCTTTCAAAGATGATCCTGCAAAGCAAGAAAGATTTGAGCAGTTTCTTAAGGAGAAATATAAAGGGGGATTACGCTCTGCTAGTTCTAGTTTAGCTGGTGATATGTCAGAAGTTGCTCGTGCTCAAGAGAGACTAAGTTTTGAGGCTGCAGCTGAGGCAATAGAAAAGGGACGACAGGTCAGGGGAAGCAAGCCTTTAATTCCATCTTCCGTGGATTTTATCCCAGGTGGTGTTATGCAGTTTACTTCTGGTGAAGTAAAGCCCAAGAAAGATCTGCAAGCTGAAGATATTTTGAAGAAGAAAATGTACCCTAAGAGGGAAGAGTTTCAATGGCGCCCTTCACCTCTTCTGTGCAAACGCTTTGATCTTATTGATCCTTATATGGGGAAGCCACCACCTGCTCCACGGATTAGGAGTAAGATGGATACCTTGATTTTTACATCAGATTCGGTCAAAGGTGCCAAAGTGGACGAGCCTGTTACTTCAAAGAAAGACATCTCACCTTTGCAGCTATCTACTAATAAAGACATAACCATAAGTATTACTGAAAATGAAATGGAAGGGGACGTGGAAGTGGAAAATATTGAAAGGCCAGTTGACCTATACAAGGCTATTTTCTCCGATGATTCAGATGATGAAGGCCCTAGTAATAGGAGAGTGGAGAATCAAGAAAAGAAAGCTGAAGTAGCTAATACAGCACTGAGCCGTTTGATTGCTGGTGATTTTCTGGAATCATTGGGCAAGGAACTAGGAATTGAGGTTCCTCCTGATATGCCTTACGCTATGCAAAAGTCCAGGAATGTTGCACCTCAGAAAGACATCTTTAATGAAGATGCAAGAACCGATATCCTGAAGAGTGAAAACAACGGTGTGATGTCCTTAAATCATGATTTGCCAAATGATCAGCAGCACATTGCTCATGAGGGTGGGCCATCAAAAGGTGATGACACCATTGATGGAAATATGCTTGAGAGCAGTATTAACAAAACCAAGGGAACCAGCAGCCAAGACAATGACAGCTGTTCAGAAGAAAGGAGCAAAAAGCAATCTAATAGGGAAAAATACAATGAGTACAGGAAAGATAAAACCCCTGTAACACACGGCTGGGATTATAGCAGCAGTTCTAAGTTAGAAGAGGAAAGGAGCAGAAAATGTTCCAGACATCATCGGCATAAGAAGCGCCATGCAGGAAGTCATTCATCTAGTGACGATGACAGAAGAGATAGACACAGTTCAAGGTCAAAAGGGAGAAGGAAAGGTTCTTCCCAAGAAAAAAGCAGGAGTGAAAAACACTCAAAACATCACAAGCACAGAAAGCATGAATCTCCAAATAGATCCTCTCGTTATAGCAAAGAGAAAGACAATTCACATTCCAGAAAAGAGAAAAGGCGGGGAGAATGA

>Glyma.05g015200.2 sequence-type=CDS polypeptide=Glyma.05g015200.2.p locus=Glyma.05g015200 id=Glyma.05g015200.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGAGTCAGATGAAGACGATTTTGTTTTCTACGGAACGCCGATAGAGCGTGAGGATGATTCAATCAGTCGCAAGAAGAAGGCCATTGCCGAGTCCTCCGGTCAGCTCCGAACTCTCCCCGCTTGGAAGCAAGAGGTTAGAGATGAGGAAGGGCGGAGAAGATTCCATGGAGCGTTTACAGGAGGCTATTCTGCGGGTTACTATAATACAGTGGGCTCAAAGGAAGGGTGGGCACCTCAGTCATTTAAATCATCAAGGAAGAACAGGGCTGAATTCAAAGAGCAGAACATACTGAATTTTCTAGATGAAGATGAGAAAACTGAATTGGAAGGTCGTTTTTTGGGGACAACCTCACAGTTTGACACATTTGGTTTCACAGCTGCTGAAATTGCTCGCAAACAAGCTGAGAAGGAACAGAAACAGAGGCCATCCATAATTCCTGGACCTGCTCCTGATGAAATAGTTGTTCCAGCCACTGAATCTGTTGGGGTAAAACTGCTCTTGAAGATGGGATGGAGTCATGGTCGCTCAATCAAGGATTCACATTCTGAGGCACTGTATGATGCCAGAAGACAGGCCCGTAGAGCTTTCTTAGCATTTTCTTCTGATGATCCAAAAGTGAAGATTACTGAGACTGAACCCATCGAGGGTGATACTGAAAATTTTCCTGAGGAACCTGTGAATGACGATGTTTGGTTTTCTAAGAGCACACCTGTGAGAAGTTTCTGTTACCAATCATATATAAATGTTTACGTACTTAACCCAAAGCAAGACCTGCATGGATTAGGTTTTGATCCTTATAAGCATGCTCCTGAGTTTAGAGAGAAAAAAAGATCACGCTTAGCCAGCAAGGGGGGACCTGGCTTCTCCACTAGAGATGGTCTTTTTGGTTTGAAGTCAGGAAAGGCTGCCCCCGGTTTTGGTATTGGAGCTCTTGAGGAGCTTGATGCAGAGGATGAGGATGTCTATGCCACTGGTTACGAATTTGAAGATGCTTATGTTCAAGAAGTTGAAGAACCTTTGACATTGAGATTAGAAAACCAGAGAAAAGAAGTTGAAGAACCTTCGACGCTGAGATTAGAAAGCCATAGAAAAAAAGAGCAGAAGGACCAGGGTGATCTGCCTGGTTTTAGAGTTGCATCCAATTCTGACTATAAAATGGAAAGATTTGAGGCTCCTCTGATCCCTAAGGATTTTGTGCCCCACCATGAATTTTCTGGACCTCTCGACATTAACCGCAAGAGCTATGAAGTCAATCCACCAGATGTTCCTCCTCCAGAGGATGGAAATTTAAAACTATTAATTGAGGGGGTTGCAAATCTGGTAGCTAAATGTGGTAAATTATATGAGGATTTATCAAGAGAAAAGAATCAATCAAATCCGTTGTTTAATTTTCTTTCTGGAGGAACTGGCCATGAATATTATGCAAGGAAATTGTGGGAGGCACAACAGAAACACAATAATCAGACTAGTCGGCAATTGGATAGAAAAATGCCTCCCAGTGTGCAGAGGCTAACAGCTGAGAGTCGAGGCCAGATCTTAGGGGAAAAACCTCTAGAAAAAAGCTCCCAAGATCTATCCTCGTCTGTTGCTTCTACAGATATTCATCTCCAATTTAATCTTACTGATACATTTATCGAGTCTGCATCACTTAGTGAGTTAATGAATGTGGAAAAGCCTTTCAAAGATGATCCTGCAAAGCAAGAAAGATTTGAGCAGTTTCTTAAGGAGAAATATAAAGGGGGATTACGCTCTGCTAGTTCTAGTTTAGCTGGTGATATGTCAGAAGTTGCTCGTGCTCAAGAGAGACTAAGTTTTGAGGCTGCAGCTGAGGCAATAGAAAAGGGACGACAGGTCAGGGGAAGCAAGCCTTTAATTCCATCTTCCGTGGATTTTATCCCAGGTGGTGTTATGCAGTTTACTTCTGGTGAAGTAAAGCCCAAGAAAGATCTGCAAGCTGAAGATATTTTGAAGAAGAAAATGTACCCTAAGAGGGAAGAGTTTCAATGGCGCCCTTCACCTCTTCTGTGCAAACGCTTTGATCTTATTGATCCTTATATGGGGAAGCCACCACCTGCTCCACGGATTAGGAGTAAGATGGATACCTTGATTTTTACATCAGATTCGGTCAAAGGTGCCAAAGTGGACGAGCCTGTTACTTCAAAGAAAGACATCTCACCTTTGCAGCTATCTACTAATAAAGACATAACCATAAGTATTACTGAAAATGAAATGGAAGGGGACGTGGAAGTGGAAAATATTGAAAGGCCAGTTGACCTATACAAGGCTATTTTCTCCGATGATTCAGATGATGAAGGCCCTAGTAATAGGAGAGTGGAGAATCAAGAAAAGAAAGCTGAAGTAGCTAATACAGCACTGAGCCGTTTGATTGCTGGTGATTTTCTGGAATCATTGGGCAAGGAACTAGGAATTGAGGTTCCTCCTGATATGCCTTACGCTATGCAAAAGTCCAGGAATGTTGCACCTCAGAAAGACATCTTTAATGAAGATGCAAGAACCGATATCCTGAAGAGTGAAAACAACGGTGTGATGTCCTTAAATCATGATTTGCCAAATGATCAGCAGCACATTGCTCATGAGGGTGGGCCATCAAAAGGTGATGACACCATTGATGGAAATATGCTTGAGAGCAGTATTAACAAAACCAAGGGAACCAGCAGCCAAGACAATGACAGCTGTTCAGAAGAAAGGAGCAAAAAGCAATCTAATAGGGAAAAATACAATGAGTACAGGAAAGATAAAACCCCTGTAACACACGGCTGGGATTATAGCAGCAGTTCTAAGTTAGAAGAGGAAAGGAGCAGAAAATGTTCCAGACATCATCGGCATAAGAAGCGCCATGCAGGAAGTCATTCATCTAGTGACGATGACAGAAGAGATAGACACAGTTCAAGGTCAAAAGGGAGAAGGAAAGGTTCTTCCCAAGAAAAAAGCAGGAGTGAAAAACACTCAAAACATCACAAGCACAGAAAGCATGAATCTCCAAATAGATCCTCTCGTTATAGCAAAGAGAAAGACAATTCACATTCCAGAAAAGAGAAAAGGCGGGGAGAATGA

>Glyma.05g015200.1.p sequence-type=predicted peptide transcript=Glyma.05g015200.1 locus=Glyma.05g015200 id=Glyma.05g015200.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MESDEDDFVFYGTPIEREDDSISRKKKAIAESSGQLRTLPAWKQEVRDEEGRRRFHGAFTGGYSAGYYNTVGSKEGWAPQSFKSSRKNRAEFKEQNILNFLDEDEKTELEGRFLGTTSQFDTFGFTAAEIARKQAEKEQKQRPSIIPGPAPDEIVVPATESVGVKLLLKMGWSHGRSIKDSHSEALYDARRQARRAFLAFSSDDPKVKITETEPIEGDTENFPEEPVNDDVWFSKSTPVYVLNPKQDLHGLGFDPYKHAPEFREKKRSRLASKGGPGFSTRDGLFGLKSGKAAPGFGIGALEELDAEDEDVYATGYEFEDAYVQEVEEPLTLRLENQRKEVEEPSTLRLESHRKKEQKDQGDLPGFRVASNSDYKMERFEAPLIPKDFVPHHEFSGPLDINRKSYEVNPPDVPPPEDGNLKLLIEGVANLVAKCGKLYEDLSREKNQSNPLFNFLSGGTGHEYYARKLWEAQQKHNNQTSRQLDRKMPPSVQRLTAESRGQILGEKPLEKSSQDLSSSVASTDIHLQFNLTDTFIESASLSELMNVEKPFKDDPAKQERFEQFLKEKYKGGLRSASSSLAGDMSEVARAQERLSFEAAAEAIEKGRQVRGSKPLIPSSVDFIPGGVMQFTSGEVKPKKDLQAEDILKKKMYPKREEFQWRPSPLLCKRFDLIDPYMGKPPPAPRIRSKMDTLIFTSDSVKGAKVDEPVTSKKDISPLQLSTNKDITISITENEMEGDVEVENIERPVDLYKAIFSDDSDDEGPSNRRVENQEKKAEVANTALSRLIAGDFLESLGKELGIEVPPDMPYAMQKSRNVAPQKDIFNEDARTDILKSENNGVMSLNHDLPNDQQHIAHEGGPSKGDDTIDGNMLESSINKTKGTSSQDNDSCSEERSKKQSNREKYNEYRKDKTPVTHGWDYSSSSKLEEERSRKCSRHHRHKKRHAGSHSSSDDDRRDRHSSRSKGRRKGSSQEKSRSEKHSKHHKHRKHESPNRSSRYSKEKDNSHSRKEKRRGE*

>Glyma.05g015200.2.p sequence-type=predicted peptide transcript=Glyma.05g015200.2 locus=Glyma.05g015200 id=Glyma.05g015200.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MESDEDDFVFYGTPIEREDDSISRKKKAIAESSGQLRTLPAWKQEVRDEEGRRRFHGAFTGGYSAGYYNTVGSKEGWAPQSFKSSRKNRAEFKEQNILNFLDEDEKTELEGRFLGTTSQFDTFGFTAAEIARKQAEKEQKQRPSIIPGPAPDEIVVPATESVGVKLLLKMGWSHGRSIKDSHSEALYDARRQARRAFLAFSSDDPKVKITETEPIEGDTENFPEEPVNDDVWFSKSTPVRSFCYQSYINVYVLNPKQDLHGLGFDPYKHAPEFREKKRSRLASKGGPGFSTRDGLFGLKSGKAAPGFGIGALEELDAEDEDVYATGYEFEDAYVQEVEEPLTLRLENQRKEVEEPSTLRLESHRKKEQKDQGDLPGFRVASNSDYKMERFEAPLIPKDFVPHHEFSGPLDINRKSYEVNPPDVPPPEDGNLKLLIEGVANLVAKCGKLYEDLSREKNQSNPLFNFLSGGTGHEYYARKLWEAQQKHNNQTSRQLDRKMPPSVQRLTAESRGQILGEKPLEKSSQDLSSSVASTDIHLQFNLTDTFIESASLSELMNVEKPFKDDPAKQERFEQFLKEKYKGGLRSASSSLAGDMSEVARAQERLSFEAAAEAIEKGRQVRGSKPLIPSSVDFIPGGVMQFTSGEVKPKKDLQAEDILKKKMYPKREEFQWRPSPLLCKRFDLIDPYMGKPPPAPRIRSKMDTLIFTSDSVKGAKVDEPVTSKKDISPLQLSTNKDITISITENEMEGDVEVENIERPVDLYKAIFSDDSDDEGPSNRRVENQEKKAEVANTALSRLIAGDFLESLGKELGIEVPPDMPYAMQKSRNVAPQKDIFNEDARTDILKSENNGVMSLNHDLPNDQQHIAHEGGPSKGDDTIDGNMLESSINKTKGTSSQDNDSCSEERSKKQSNREKYNEYRKDKTPVTHGWDYSSSSKLEEERSRKCSRHHRHKKRHAGSHSSSDDDRRDRHSSRSKGRRKGSSQEKSRSEKHSKHHKHRKHESPNRSSRYSKEKDNSHSRKEKRRGE*







Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo