Report for Sequence Feature Glyma.05g007800
Feature Type: gene_model
Chromosome: Gm05
Start: 732051
stop: 736110
Source: JGI
Version: Wm82.a2.v1
High confidence: yes
A previous version of this gene model can be found here:
Annotations for Glyma.05g007800
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT3G27960.1 AT
Tetratricopeptide repeat (TPR)-like superfamily protein
JGI N/A IEA
GO:0005515 GO-mf
protein binding
EnsemblGenomes N/A IEA
GO:0005515 GO-mf
protein binding
JGI N/A IEA
KOG1840
KOG
Kinesin light chain
JGI N/A IEA
PTHR19959 Panther
KINESIN LIGHT CHAIN
JGI N/A IEA
Expression Patterns of Glyma.05g007800
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Related Legume Genes
Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS .
Gene information in GlycineMine developed by LIS .
Related Plant Genes
Gene families from PhyloGenes .
Paralogs of Glyma.05g007800
Paralog Evidence Comments
Glyma.19g008200 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.
Gene model name correspondences to Glyma.05g007800 Gene Call Version Wm82.a2.v1
Corresponding Name Annotation Version Evidence Comments
Glyma05g08530 Wm82.a1.v1.1 IGC As supplied by JGI
Transcripts of Glyma.05g007800
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma.05g007800.2 sequence-type=transcript locus=Glyma.05g007800 ID=Glyma.05g007800.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
GGAGAGGTCACCTTCTTGGTTTTGCTTCAACATTCCAACTCTGTGGAACAAGTACAACTCTTGCACACATGACATGATGCATACATATATTATCTAGAAAATCTCAAAAATTCCAATTTCAATTCCCATTCTGCCCTTCACATTCACTCAAAATTTCCATTACCTGACACGggtcttgttccacacacacacacacacacacacacacacacacacatatatatatatatatatatatatatatatatatatGTGCAATTACAAATGGTACAGATATGTTGACCCATATCTCTTCATCTGTACATAATAACATAACACCCATACAAGAAAGCAAGCAACCTTTGAAAGTTTTGGCTTATATCCTTCGGAGAGTACTAAAGCCATGGATGAATTGAATGTAAATAGTGCAGCAGAGGAACCAAGTGGGAGTTATAAGGAAAACTTTGCTCAACAAGCATCACCAAGGAGTACACTGAGTCCAAGAAGCATTCAGAGTGATTCAATTGATTTGGCTATTGATGGAGTGGTGGATACCTCAATTGAGCAATTGTATCACAATGTGTGTGAAATGAGGAGCTCTGATCACTCACCCTCCAGGGCTAGTTTCTACTCTTACGACTATGATGGTGAGTCAAGGATTGATTCAGAACTGGGCCATCTTGCTGGTGATATTGTGGATTTGGAGATCACAAAGGAGGTGGTCACAGAGAATAAAGAGGACTCCAATGCCAATGCTGAGAAAGATGCTGTTGTGTCAAAGAAGGATGACAATAACCAATCTTCACCAAACACAAAAGTCATTGAAGGATCATCCAAGGCAACTCCGAAGAGGAGCGAAAAGGGTGTCCGAAAAGCAAATGGCACTTACCGTACGAGGAGGAATAGGAGGGAGCTTGGTTTGAAGGGGATCGAGGAGCGTATTGCTGCAGGTTTAGATAATCCTGAATTGGGACCATTTTTGCTCAAGCAAACAAGAGATATGATCTCCTCGGGTGAGAATCCTCGAAAAGCGCTTGATTTGGCTGTTAGAGCTTTGAAATCATTTGAGATTTGTGCAGATGGGAAACCGAGTTTGGACATGGTCATGTGTCTGCATGTCTTGGCAACAATATACTGTAATTTAGGACAGTACAATGAGGCCATTCCCGTTCTTGAGCGTTCCATTGATATTCCGGTGTTGGAGGATGGCCAAGAGCATGCACTGGCTAAGTTTGCAGGGTGCATGCAATTGGGTGACACTTATGCAATGATGGGGCAGATTGAGAATTCTCTGCTGTTTTATGCAGCAGGTCTTGAGATTCAAGGGCAGGTCCTGGGGGAAACAGACCCGAGATTCGGCGAGACATGCCGGTATGTGGCCGAGGCACATGTTCAGGCACTGCAGTTTGATGAGGCTGAGAAGCTGTGTCAGATGGCTCTTGACATTCACAGGGGAAATGGAGCTCCTGCTTCCATTGAGGAAGCAGCAGATAGGAGACTAATGGGGCTTATCTGTGACTCAAAGGGTGATTATGAAGCTGCTCTAGAGCATTATGTTTTGGCAAGCATGGCTATTGCTGCAAATGATCATGAAGCAGATGTGGCTTCAGTTGATTGCAGCATAGGTGATGCCTACCTGGCGTTGGCACGCTATGATGAGGCGGTGTTTTCTTATCAGAAAGCACTCACTGTGTTCAAATCAACCAAAGGAGAGAATCATCCAACAGTTGCTTCAGTCTATGTTAGGTTGGCTGATCTGTACAACAAGATAGGGAAGTTCAAAGAATCCAAATCTTACTGTGAAAATGCACTCAGGATTTTCGGCAAGATCAAGCCAGGGATCCCCTCAGAAGAGATTGCTAGTGGCTTGATAGATGTTGCTGCAATCTATCAATCCATGAATGATTTGGAGAAAGGGTTGAAGTTGCTCAAAAAGGCCTTGAAGATATATGGCAATGCTCCTGGCCAACAAAGCACTGTTGCAGGAATTGAGGCCCAAATGGGGGTTATGTATTACTTGCTAGGGAACTATTCTGATTCTTACAACATCTTCAAAAGCGCCATTGCCAAATTTCGTGCAAGCGGAGAGAAGAAAACCGCTTTGTTTGGAATTGCTTTGAACCAAATGGGCCTTGCCTGTGTGCAGTGTTATGCTATAAATGAGGCAGCAGATTTGTTTGAAGAGGCCAAGACTATATTGGAAAAAGAGTATGCTCCATATCATCCAGACACCTTAGGGGTCTATAGCAATCTAGCAGGCACCTATGATGCAATGGGAAGAGTGGATGATGCCATTGAAATTTTGGAATATGTAGTTGGCATGAGAGAAGAGAAGCTTGGAACAGCAAACCCAGATGTGGATGATGAGAGGCGTAGGTTGGAAGAGTTGTTGAAAGAAGCCGGCAGGGCCCGAAACAGGAGATCAAGAAGATCATTGGAAACTCTCCTTGACACCAATTCTCAGCTTATAAAAAACAATGGCATTACGGTCCTATAAACCTGTGGTTGTATATAAAACAAGATAAGGTTAACTGTTTTGATCATTATGATCGTTGCTTGCATATTTGGCCGGGGAAACAATAACAAAGTGGAAGTAGATTCCACTATCCAATTGTTTGTTACTAAAGCATGTTCACAAAAGTTACTTCATATATGTCTCTTTTCTATAGTGAAGAGTAAATTCCGGTTACTCATATTTTTCCTTGTATAATTGAATCTATAAATGGTGGAAATTCAAATTTCTATGTATACAAATGGATGTTGAAACTTAAGTTTCCCTGCTGCTGGTACACCAAACGTCCCATTAGAAAATTCAGTTGCTTCTAACCACGTTTTAGATGCAACATAGTTTTACTAGTTCCGATGTTATAGTCAAGGATCTTATGAACGTGACAAGCATGAATATGACACTGCAGACTGCAGAGCCGCTGTTGTAGGTGGCATCATATATCAAAATCTTAGGCTTACATTGTAATGCACGACATTTGCGTAAAAATCTTATTTGCCCACGTCTTGACCAGTCCTTAGGATTTAGATAATTGTGATATTATATAAAGATTTATACATTTTCTG
Coding sequences of Glyma.05g007800
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma.05g007800.1 sequence-type=CDS polypeptide=Glyma.05g007800.1.p locus=Glyma.05g007800 ID=Glyma.05g007800.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGCCTGGTTTAGCCATGGATGAATTGAATGTAAATAGTGCAGCAGAGGAACCAAGTGGGAGTTATAAGGAAAACTTTGCTCAACAAGCATCACCAAGGAGTACACTGAGTCCAAGAAGCATTCAGAGTGATTCAATTGATTTGGCTATTGATGGAGTGGTGGATACCTCAATTGAGCAATTGTATCACAATGTGTGTGAAATGAGGAGCTCTGATCACTCACCCTCCAGGGCTAGTTTCTACTCTTACGACTATGATGGTGAGTCAAGGATTGATTCAGAACTGGGCCATCTTGCTGGTGATATTGTGGATTTGGAGATCACAAAGGAGGTGGTCACAGAGAATAAAGAGGACTCCAATGCCAATGCTGAGAAAGATGCTGTTGTGTCAAAGAAGGATGACAATAACCAATCTTCACCAAACACAAAAGTCATTGAAGGATCATCCAAGGCAACTCCGAAGAGGAGCGAAAAGGGTGTCCGAAAAGCAAATGGCACTTACCGTACGAGGAGGAATAGGAGGGAGCTTGGTTTGAAGGGGATCGAGGAGCGTATTGCTGCAGGTTTAGATAATCCTGAATTGGGACCATTTTTGCTCAAGCAAACAAGAGATATGATCTCCTCGGGTGAGAATCCTCGAAAAGCGCTTGATTTGGCTGTTAGAGCTTTGAAATCATTTGAGATTTGTGCAGATGGGAAACCGAGTTTGGACATGGTCATGTGTCTGCATGTCTTGGCAACAATATACTGTAATTTAGGACAGTACAATGAGGCCATTCCCGTTCTTGAGCGTTCCATTGATATTCCGGTGTTGGAGGATGGCCAAGAGCATGCACTGGCTAAGTTTGCAGGGTGCATGCAATTGGGTGACACTTATGCAATGATGGGGCAGATTGAGAATTCTCTGCTGTTTTATGCAGCAGGTCTTGAGATTCAAGGGCAGGTCCTGGGGGAAACAGACCCGAGATTCGGCGAGACATGCCGGTATGTGGCCGAGGCACATGTTCAGGCACTGCAGTTTGATGAGGCTGAGAAGCTGTGTCAGATGGCTCTTGACATTCACAGGGGAAATGGAGCTCCTGCTTCCATTGAGGAAGCAGCAGATAGGAGACTAATGGGGCTTATCTGTGACTCAAAGGGTGATTATGAAGCTGCTCTAGAGCATTATGTTTTGGCAAGCATGGCTATTGCTGCAAATGATCATGAAGCAGATGTGGCTTCAGTTGATTGCAGCATAGGTGATGCCTACCTGGCGTTGGCACGCTATGATGAGGCGGTGTTTTCTTATCAGAAAGCACTCACTGTGTTCAAATCAACCAAAGGAGAGAATCATCCAACAGTTGCTTCAGTCTATGTTAGGTTGGCTGATCTGTACAACAAGATAGGGAAGTTCAAAGAATCCAAATCTTACTGTGAAAATGCACTCAGGATTTTCGGCAAGATCAAGCCAGGGATCCCCTCAGAAGAGATTGCTAGTGGCTTGATAGATGTTGCTGCAATCTATCAATCCATGAATGATTTGGAGAAAGGGTTGAAGTTGCTCAAAAAGGCCTTGAAGATATATGGCAATGCTCCTGGCCAACAAAGCACTGTTGCAGGAATTGAGGCCCAAATGGGGGTTATGTATTACTTGCTAGGGAACTATTCTGATTCTTACAACATCTTCAAAAGCGCCATTGCCAAATTTCGTGCAAGCGGAGAGAAGAAAACCGCTTTGTTTGGAATTGCTTTGAACCAAATGGGCCTTGCCTGTGTGCAGTGTTATGCTATAAATGAGGCAGCAGATTTGTTTGAAGAGGCCAAGACTATATTGGAAAAAGAGTATGCTCCATATCATCCAGACACCTTAGGGGTCTATAGCAATCTAGCAGGCACCTATGATGCAATGGGAAGAGTGGATGATGCCATTGAAATTTTGGAATATGTAGTTGGCATGAGAGAAGAGAAGCTTGGAACAGCAAACCCAGATGTGGATGATGAGAGGCGTAGGTTGGAAGAGTTGTTGAAAGAAGCCGGCAGGGCCCGAAACAGGAGATCAAGAAGATCATTGGAAACTCTCCTTGACACCAATTCTCAGCTTATAAAAAACAATGGCATTACGGTCCTATAA
>Glyma.05g007800.2 sequence-type=CDS polypeptide=Glyma.05g007800.2.p locus=Glyma.05g007800 ID=Glyma.05g007800.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGATGAATTGAATGTAAATAGTGCAGCAGAGGAACCAAGTGGGAGTTATAAGGAAAACTTTGCTCAACAAGCATCACCAAGGAGTACACTGAGTCCAAGAAGCATTCAGAGTGATTCAATTGATTTGGCTATTGATGGAGTGGTGGATACCTCAATTGAGCAATTGTATCACAATGTGTGTGAAATGAGGAGCTCTGATCACTCACCCTCCAGGGCTAGTTTCTACTCTTACGACTATGATGGTGAGTCAAGGATTGATTCAGAACTGGGCCATCTTGCTGGTGATATTGTGGATTTGGAGATCACAAAGGAGGTGGTCACAGAGAATAAAGAGGACTCCAATGCCAATGCTGAGAAAGATGCTGTTGTGTCAAAGAAGGATGACAATAACCAATCTTCACCAAACACAAAAGTCATTGAAGGATCATCCAAGGCAACTCCGAAGAGGAGCGAAAAGGGTGTCCGAAAAGCAAATGGCACTTACCGTACGAGGAGGAATAGGAGGGAGCTTGGTTTGAAGGGGATCGAGGAGCGTATTGCTGCAGGTTTAGATAATCCTGAATTGGGACCATTTTTGCTCAAGCAAACAAGAGATATGATCTCCTCGGGTGAGAATCCTCGAAAAGCGCTTGATTTGGCTGTTAGAGCTTTGAAATCATTTGAGATTTGTGCAGATGGGAAACCGAGTTTGGACATGGTCATGTGTCTGCATGTCTTGGCAACAATATACTGTAATTTAGGACAGTACAATGAGGCCATTCCCGTTCTTGAGCGTTCCATTGATATTCCGGTGTTGGAGGATGGCCAAGAGCATGCACTGGCTAAGTTTGCAGGGTGCATGCAATTGGGTGACACTTATGCAATGATGGGGCAGATTGAGAATTCTCTGCTGTTTTATGCAGCAGGTCTTGAGATTCAAGGGCAGGTCCTGGGGGAAACAGACCCGAGATTCGGCGAGACATGCCGGTATGTGGCCGAGGCACATGTTCAGGCACTGCAGTTTGATGAGGCTGAGAAGCTGTGTCAGATGGCTCTTGACATTCACAGGGGAAATGGAGCTCCTGCTTCCATTGAGGAAGCAGCAGATAGGAGACTAATGGGGCTTATCTGTGACTCAAAGGGTGATTATGAAGCTGCTCTAGAGCATTATGTTTTGGCAAGCATGGCTATTGCTGCAAATGATCATGAAGCAGATGTGGCTTCAGTTGATTGCAGCATAGGTGATGCCTACCTGGCGTTGGCACGCTATGATGAGGCGGTGTTTTCTTATCAGAAAGCACTCACTGTGTTCAAATCAACCAAAGGAGAGAATCATCCAACAGTTGCTTCAGTCTATGTTAGGTTGGCTGATCTGTACAACAAGATAGGGAAGTTCAAAGAATCCAAATCTTACTGTGAAAATGCACTCAGGATTTTCGGCAAGATCAAGCCAGGGATCCCCTCAGAAGAGATTGCTAGTGGCTTGATAGATGTTGCTGCAATCTATCAATCCATGAATGATTTGGAGAAAGGGTTGAAGTTGCTCAAAAAGGCCTTGAAGATATATGGCAATGCTCCTGGCCAACAAAGCACTGTTGCAGGAATTGAGGCCCAAATGGGGGTTATGTATTACTTGCTAGGGAACTATTCTGATTCTTACAACATCTTCAAAAGCGCCATTGCCAAATTTCGTGCAAGCGGAGAGAAGAAAACCGCTTTGTTTGGAATTGCTTTGAACCAAATGGGCCTTGCCTGTGTGCAGTGTTATGCTATAAATGAGGCAGCAGATTTGTTTGAAGAGGCCAAGACTATATTGGAAAAAGAGTATGCTCCATATCATCCAGACACCTTAGGGGTCTATAGCAATCTAGCAGGCACCTATGATGCAATGGGAAGAGTGGATGATGCCATTGAAATTTTGGAATATGTAGTTGGCATGAGAGAAGAGAAGCTTGGAACAGCAAACCCAGATGTGGATGATGAGAGGCGTAGGTTGGAAGAGTTGTTGAAAGAAGCCGGCAGGGCCCGAAACAGGAGATCAAGAAGATCATTGGAAACTCTCCTTGACACCAATTCTCAGCTTATAAAAAACAATGGCATTACGGTCCTATAA
Predicted protein sequences of Glyma.05g007800
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma.05g007800.1.p sequence-type=predicted peptide transcript=Glyma.05g007800.1 locus=Glyma.05g007800 ID=Glyma.05g007800.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MPGLAMDELNVNSAAEEPSGSYKENFAQQASPRSTLSPRSIQSDSIDLAIDGVVDTSIEQLYHNVCEMRSSDHSPSRASFYSYDYDGESRIDSELGHLAGDIVDLEITKEVVTENKEDSNANAEKDAVVSKKDDNNQSSPNTKVIEGSSKATPKRSEKGVRKANGTYRTRRNRRELGLKGIEERIAAGLDNPELGPFLLKQTRDMISSGENPRKALDLAVRALKSFEICADGKPSLDMVMCLHVLATIYCNLGQYNEAIPVLERSIDIPVLEDGQEHALAKFAGCMQLGDTYAMMGQIENSLLFYAAGLEIQGQVLGETDPRFGETCRYVAEAHVQALQFDEAEKLCQMALDIHRGNGAPASIEEAADRRLMGLICDSKGDYEAALEHYVLASMAIAANDHEADVASVDCSIGDAYLALARYDEAVFSYQKALTVFKSTKGENHPTVASVYVRLADLYNKIGKFKESKSYCENALRIFGKIKPGIPSEEIASGLIDVAAIYQSMNDLEKGLKLLKKALKIYGNAPGQQSTVAGIEAQMGVMYYLLGNYSDSYNIFKSAIAKFRASGEKKTALFGIALNQMGLACVQCYAINEAADLFEEAKTILEKEYAPYHPDTLGVYSNLAGTYDAMGRVDDAIEILEYVVGMREEKLGTANPDVDDERRRLEELLKEAGRARNRRSRRSLETLLDTNSQLIKNNGITVL*
>Glyma.05g007800.2.p sequence-type=predicted peptide transcript=Glyma.05g007800.2 locus=Glyma.05g007800 ID=Glyma.05g007800.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MDELNVNSAAEEPSGSYKENFAQQASPRSTLSPRSIQSDSIDLAIDGVVDTSIEQLYHNVCEMRSSDHSPSRASFYSYDYDGESRIDSELGHLAGDIVDLEITKEVVTENKEDSNANAEKDAVVSKKDDNNQSSPNTKVIEGSSKATPKRSEKGVRKANGTYRTRRNRRELGLKGIEERIAAGLDNPELGPFLLKQTRDMISSGENPRKALDLAVRALKSFEICADGKPSLDMVMCLHVLATIYCNLGQYNEAIPVLERSIDIPVLEDGQEHALAKFAGCMQLGDTYAMMGQIENSLLFYAAGLEIQGQVLGETDPRFGETCRYVAEAHVQALQFDEAEKLCQMALDIHRGNGAPASIEEAADRRLMGLICDSKGDYEAALEHYVLASMAIAANDHEADVASVDCSIGDAYLALARYDEAVFSYQKALTVFKSTKGENHPTVASVYVRLADLYNKIGKFKESKSYCENALRIFGKIKPGIPSEEIASGLIDVAAIYQSMNDLEKGLKLLKKALKIYGNAPGQQSTVAGIEAQMGVMYYLLGNYSDSYNIFKSAIAKFRASGEKKTALFGIALNQMGLACVQCYAINEAADLFEEAKTILEKEYAPYHPDTLGVYSNLAGTYDAMGRVDDAIEILEYVVGMREEKLGTANPDVDDERRRLEELLKEAGRARNRRSRRSLETLLDTNSQLIKNNGITVL*