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Report for Sequence Feature Glyma.05g005300

Feature Type:gene_model
Chromosome:Gm05
Start:462453
stop:473868
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.05g005300
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G14590.1AT JGI N/AIEA
1.1.1.42EC isocitrate dehydrogenase (NADP+) JGI N/AIEA
GO:0006102GO-bp isocitrate metabolic process JGI N/AIEA
GO:0055114GO-bp obsolete oxidation-reduction process JGI N/AIEA
GO:0004450GO-mf isocitrate dehydrogenase (NADP+) activity JGI N/AIEA
GO:0016616GO-mf oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor JGI N/AIEA
K00031KEGG Central carbon metabolism in cancer JGI N/AIEA
PTHR11822PantherFam NADP-SPECIFIC ISOCITRATE DEHYDROGENASE JGI N/AIEA
PTHR11822:SF5PantherFam ISOCITRATE DEHYDROGENASE [NADP], CHLOROPLASTIC/MITOCHONDRIAL JGI N/AIEA
PF00180Pfam Isocitrate/isopropylmalate dehydrogenase JGI N/AIEA

Gene model name correspondences to Glyma.05g005300 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma05g08770 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.05g005300
>Glyma.05g005300.1 sequence-type=CDS polypeptide=Glyma.05g005300.1.p locus=Glyma.05g005300 id=Glyma.05g005300.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGTAAGAGTATCAGCGGTTCGATTAAGCGCCACCATGTTCTCCTCAACCTCTCTCAGAAACCCTAACTTCCTCCTCCTTCCAACTCGCTTCGACGCACCCGTTCTTCGCTCCCACACGCTTTCCTTCTCCAATCGCCTCTCGCTTCGATGCTACGCTGCTCGCGCCGCCTTCGACAGAGTTCCCGTTCTCAATCCCATCGTCGAAATGGACGGTGATGAAATGACGAGGATTATATGGAGGATGATCAAGGATAAACTTATATTTCCTTACCTGGATTTGAACATAAAGTACTTTGATTTGGGGCTTCAAAATCGTGATGCTACTGATGACAGAGTTACTGTGGAAAGTGCTGAAGCCACTCTCAAGTATAACGTCGCTGTGAAATGTGCAACAATAACTCCTGATGAGACCCGAGTGAAAGAATTTGGACTGAAGTCTATGTGGAGAAGCCCCAATGGCACAATTAGGAATATTTTAAATGGTACTGTTTTCCGTGAACCCATAATATGCTGCAACATACCGAGAATTGTTTCCGGATGGAAAAAACCCATTTGTATTGGTAGGCATGCTTTTGGTGACCAGTATCGGGCCACTGATGCAATAATTACAGGACCAGGGAAGCTTAAGTTGGTATTTGTCCCAGAAGATGGTGATGCTCCAATGGAGCTTGATGTTTACAATTTCAAAGGCCCAGGTGTAGCACTTGCTATGTATAATGTTGATGAGTCTATTCGAGCATTTGCTGAATCATCAATGTCACTTGCATTTGCAAAGAAATGGCCACTTTACTTGAGCACCAAAAACACAATTCTAAAGAAATATGATGGCAGATTTAAGGACATATTCCAGGAGGTGTATGAAGAAAGGTGGAGGCAAAAGTTTGAAGAACACTCAATATGGTATGAGCATAGGCTAATTGATGACATGGTAGCATATGCACTCAAAAGTGAAGGTGGATATGTTTGGGCTTGCAAGAATTATGATGGTGATGTCCAAAGTGATTTACTTGCTCAAGGTTTTGGCTCATTGGGTCTCATGACTTCTGTGCTGTTATCTTCTGATGGCAAGACATTAGAAGCTGAGGCAGCTCATGGAACTGTAACTCGACATTTTCGGTTTCATCAGAAGGGACAAGAAACTAGTACAAACAGTATTGCTTCCATATTTGCATGGACAAGAGGACTGGAACATAGAGCGAAGCTGGATAATAATGAAAAATTACGGGATTTTACTCAAAATTTGGAGGCTGCATGTGTTGAGACAGTGGAATCAGGAAAGATGACTAAAGATCTTGCAATTCTGATTCATGGACCTAAGGTATCAAGGGAATTTTACTTGAACACGGAGGAATTTATTGATGCTGTGGCACATAATCTTCAGAAAAAGCTCCGAGAGCCTGCAGTGGTCTAG
Predicted protein sequences of Glyma.05g005300
>Glyma.05g005300.1.p sequence-type=predicted peptide transcript=Glyma.05g005300.1 locus=Glyma.05g005300 id=Glyma.05g005300.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MVRVSAVRLSATMFSSTSLRNPNFLLLPTRFDAPVLRSHTLSFSNRLSLRCYAARAAFDRVPVLNPIVEMDGDEMTRIIWRMIKDKLIFPYLDLNIKYFDLGLQNRDATDDRVTVESAEATLKYNVAVKCATITPDETRVKEFGLKSMWRSPNGTIRNILNGTVFREPIICCNIPRIVSGWKKPICIGRHAFGDQYRATDAIITGPGKLKLVFVPEDGDAPMELDVYNFKGPGVALAMYNVDESIRAFAESSMSLAFAKKWPLYLSTKNTILKKYDGRFKDIFQEVYEERWRQKFEEHSIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDLLAQGFGSLGLMTSVLLSSDGKTLEAEAAHGTVTRHFRFHQKGQETSTNSIASIFAWTRGLEHRAKLDNNEKLRDFTQNLEAACVETVESGKMTKDLAILIHGPKVSREFYLNTEEFIDAVAHNLQKKLREPAVV*






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