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Report for Sequence Feature Glyma.05g003900

Feature Type:gene_model
Chromosome:Gm05
Start:308376
stop:312978
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.05g003900
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G40390.1AT SIP1 JGI N/AIEA
2.4.1.82EC galactinol-sucrose galactosyltransferase JGI N/AIEA
K06617KEGG Galactose metabolism JGI N/AIEA
PTHR31268PantherFam FAMILY NOT NAMED JGI N/AIEA
PF05691Pfam Raffinose synthase or seed imbibition protein Sip1 JGI N/AIEA

Proteins Associated with Glyma.05g003900
LocusGene SymbolProtein Name
RS3 Raffinose Synthase 3

Gene model name correspondences to Glyma.05g003900 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma05g08950 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.05g003900
>Glyma.05g003900.1 sequence-type=CDS polypeptide=Glyma.05g003900.1.p locus=Glyma.05g003900 id=Glyma.05g003900.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGGTCCAAGCTCGAAGAAAGCTTCACCTAAATCAGGTGTGACAAAGCACATGAAGGGCTTCAGCCTCTGCAACTCAACCCTAAAAGTAAATGGGCAAGTCATCCTCTCCCAAGTCCCCAAGAACGTAACCCTCACCCCATGCACCTACGACACTCACACCACCGGATGCTTCCTCGGTTTCCACGCCACCTCCCCAAAATCCCGCCACGTGGCACCCTTAGGACAGCTTAAAAACATAAGCTTCACTTCCATCTTCCGGTTCAAGGTTTGGTGGACCACTCTCTGGACCGGCTCCAACGGCCGCGACCTGGAAACCGAAACCCAATTCCTCATGCTCCAATCCCACCCTTATGTTCTCTTCCTACCCATCCTCCAACCCCCATTTCGCGCCTCGCTGCAGCCTCACTCAGACGACAACGTTGCGGTGTGTGTGGAGAGCGGCTCCAGCCACGTAACAGCCTCATCATTCGACACTGTCGTCTACTTGCACGCAGGGGACAACCCCTTCACGCTGGTCAAGGAAGCCATGCGCGTCGTCCGGGCCCACTTGGGGAGCTTCAAGCTTCTGGAAGAGAAAACCGTTCCGGGAATGGTGGACAAGTTCGGTTGGTGCACGTGGGACGCCTTTTACCTGACGGTGCACCCTGAGGGCGTCAGAGAGGGCGTGAAGGGCCTGGTTGACGGCGGTTGTCCTCCGGGATTCGTCCTGATCGACGACGGCTGGCAGTGCATCAGCCACGATTCCGATCCGGAGAAGGAGGGGATGAATCAGACGGTGGCCGGGGAGCAAATGCCCTGCAGGTTGATTAGTTACGAGGAGAATTACAAGTTTAGGAGCTATAAGGAAGGGAAGGGGTTGAAGGGGTTTGTGAGAGAATTGAAGGAGGAGTTTGGGTCGGTGGAGTACGTGTACGTGTGGCACGCGCTGTGCGGGTATTGGGGAGGGGTGAGGCCGGGGGTGGCGGGGATGGCGGAGGCGGCGGTGGAGAAGCCAAAGCTGACGGAGGGGTTGAAGGGAACGATGGAGGATCTGGCGGTGGACAAGATTGTGAATAATGGGGTCGGGGTGGTGCCGCCGGAGCTGGTGGGGGAAATGTACGAGCGCCTTCACGCGCACTTGGAGAGTGCGGGTATTGATGGGGTCAAAGTTGATGTCATCCACTTGCTAGAAATGGTGTGTGAGAAATATGGAGGGCGAGTGGATATGGCGAAAGCATATTACAAAGCTCTCACTGCTTCCGTGAGAAAACATTTTAAGGGCAACGGCGTCATTGCCAGCATGGAGCATTGCAACGATTTCATGTTGCTGGGAACTGAAGCAATATCCCTTGGTCGTGTTGGGGATGATTTCTGGTGCACTGACCCTTATGGTGATCCAAATGGTACATTTTGGCTACAAGGGTGTCACATGGTGCATTGTGCATACAACAGCTTGTGGATGGGCAATTTCATCCACCCAGATTGGGACATGTTCCAATCTACTCATCCTTGTGCTGCCTTCCATGCTGCCTCAAGAGCCATATCTGGTGGCCCCATTTACATCAGTGACACAGTTGGGAACCACAACTTTGAGCTGCTTAAGACCTTGGCCTTGCCAGATGGGTCCATCCTCAGATGTGAGCACTATGCACTCCCAACCAGGGACTGTCTCTTTGCTGACCCTCTCCATGATGGCAAAACAATGCTCAAGATATGGAACCTCAACAAGTACACTGGAGTTCTTGGGGTGTTTAACTGCCAGGGAGGAGGTTGGTTCCGTGAGATTAGGTCCAACAAATGTGCTGCTGAGTTTTCTCATAGGGTATCAACCAAGACCAATATCAAAGACATTGAATGGGATAGTGGAAAGAATCCAATTTCCATTGAAGGGGTGCAACTTTTCGCTTCGTATTTCAGCCAAGCCAAGAAACTCATCCTCTCAGCACCATCTGATGACAGTGAAGAGATTTCCTTGGAGCCATTCAATTTCGAGCTTATAACAGTTTCCCCTGTGACTGTCTTGCCTGGCAAGTCAGTGAAGTTTGCTCCTATTGGTTTGGTGAATATGCTAAACACTGGTGGAGCAGTCCAGTCTTTAGCTTTTGATGAGGGTCAGAATTTGGTTGAAGTTGGTTTAAGAGGCACTGGGGAGATGAGAGTCTATGCCTCAGAGAAACCAAGAACTTGTAGAATTGATGGCAAAGAAGTTGATTTTGAATATGAAGGGTCTATGGTCAACATTCAAGTACCATGGCCTGGTTCTTCAAAATTGTCCACTGTTCAGTATGTATTTTAA
Predicted protein sequences of Glyma.05g003900
>Glyma.05g003900.1.p sequence-type=predicted peptide transcript=Glyma.05g003900.1 locus=Glyma.05g003900 id=Glyma.05g003900.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MGPSSKKASPKSGVTKHMKGFSLCNSTLKVNGQVILSQVPKNVTLTPCTYDTHTTGCFLGFHATSPKSRHVAPLGQLKNISFTSIFRFKVWWTTLWTGSNGRDLETETQFLMLQSHPYVLFLPILQPPFRASLQPHSDDNVAVCVESGSSHVTASSFDTVVYLHAGDNPFTLVKEAMRVVRAHLGSFKLLEEKTVPGMVDKFGWCTWDAFYLTVHPEGVREGVKGLVDGGCPPGFVLIDDGWQCISHDSDPEKEGMNQTVAGEQMPCRLISYEENYKFRSYKEGKGLKGFVRELKEEFGSVEYVYVWHALCGYWGGVRPGVAGMAEAAVEKPKLTEGLKGTMEDLAVDKIVNNGVGVVPPELVGEMYERLHAHLESAGIDGVKVDVIHLLEMVCEKYGGRVDMAKAYYKALTASVRKHFKGNGVIASMEHCNDFMLLGTEAISLGRVGDDFWCTDPYGDPNGTFWLQGCHMVHCAYNSLWMGNFIHPDWDMFQSTHPCAAFHAASRAISGGPIYISDTVGNHNFELLKTLALPDGSILRCEHYALPTRDCLFADPLHDGKTMLKIWNLNKYTGVLGVFNCQGGGWFREIRSNKCAAEFSHRVSTKTNIKDIEWDSGKNPISIEGVQLFASYFSQAKKLILSAPSDDSEEISLEPFNFELITVSPVTVLPGKSVKFAPIGLVNMLNTGGAVQSLAFDEGQNLVEVGLRGTGEMRVYASEKPRTCRIDGKEVDFEYEGSMVNIQVPWPGSSKLSTVQYVF*






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