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Report for Sequence Feature Glyma.05g003400

Feature Type:gene_model
Chromosome:Gm05
Start:238298
stop:242249
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.05g003400
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G40490.1AT JGI N/AIEA
GO:0003676GO-mf nucleic acid binding JGI N/AIEA
KOG4205 KOG RNA-binding protein musashi/mRNA cleavage and polyadenylation factor I complex, subunit HRP1 JGI N/AIEA
PTHR24012PantherFam RNA BINDING PROTEIN JGI N/AIEA
PF00076Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) JGI N/AIEA

Gene model name correspondences to Glyma.05g003400 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma05g09040 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.05g003400
>Glyma.05g003400.1 sequence-type=CDS polypeptide=Glyma.05g003400.1.p locus=Glyma.05g003400 id=Glyma.05g003400.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGAATCACCCGGTAACGAGCATGTGGTGGGTGGCGCAGAACATAACGACGTCGTTACGCCCTTTTCCCACAGAGAAGAACCCCACAATTCCCAACCCCTCACCGGCGACGGTGCCAGTCCCGGAAAGATATTTATAGGTGGTTTAGCGAGAGAAACGACCATTGCCCAATTTATCAAGCACTTTGGTAAGTATGGTGAGATCACGGATTCGGTCATCATGAAGGACAGGAAAACTGGGCAGCCTCGTGGATTTGGGTTTATAACGTATGCGGATCCCTCTGTGGTCGATAAAGTCATTGAGGATCCTCATATCATCAATGGCAAACAAGTTGAGATTAAGCGGACGATACCGAGGGGAGCTGTTGGCTCTAAGGATTTTAGGACAAAGAAAATTTTTGTAGGTGGAATTCCTTCAAATGTGACTGAAGATGAATTTAGAGACTTCTTTACACGCTATGGCGAAGTTAAAGATCACCAAATAATGCGGGACCACTCTACCAACCGATCTCGTGGCTTTGGGTTTATCACATTTGACTCTGAAGAAGCAGTTGATGATCTGCTGTCCATGGGAAACAAAATTGACTTTGCTGGATCTCAGGTGGAAATCAAGAAAGCTGAACCAAAGAAGCCAAGCTCAGCGCCTCCATCATCCAAGCGCCATAACGACTCTAGGTCTTCATATAGCAGTGGTGGATATGGAGATACTTACGATGGATTTGGTGGCAGCTTTGGAATGGGGGGTGGGTATAGGTCAGGTGGTGCTTATGGTGGTGGTAGGGGTGGTGCTTATGGTGGCTTTGGAAGTGAATTTGGTGGGTATGGAGGATATGCTGGTGAGATGGGGCCGTATAGAGGAGATCTCTCCCTCGGGTATGCTGGTCGTTATGGTGGAAACTTTAGCAGAGGGTATGATCTTGGTGGGTATGGCGGTCCTAGTGAGAATTATGGAGCATATGGTGCAGGTGGGGGTTCTTCTGGCGGTGGTGGTGCCTACCAAAGTGGCTATGATGGAAACCTAGGAGGTGGATATGGAGGGGCTAGTGGTGGCCCCTTCTATGGGAGCAGTAGAGCAGGATACAGTGCTGGTCGATATCATCCTTATGGAAGATAA

>Glyma.05g003400.2 sequence-type=CDS polypeptide=Glyma.05g003400.2.p locus=Glyma.05g003400 id=Glyma.05g003400.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGTGGTGGGTGGCGCAGAACATAACGACGTCGTTACGCCCTTTTCCCACAGAGAAGAACCCCACAATTCCCAACCCCTCACCGGCGACGGTGCCAGTCCCGGCCCAATTTATCAAGCACTTTGGTAAGTATGGTGAGATCACGGATTCGGTCATCATGAAGGACAGGAAAACTGGGCAGCCTCGTGGATTTGGGTTTATAACGTATGCGGATCCCTCTGTGGTCGATAAAGTCATTGAGGATCCTCATATCATCAATGGCAAACAAGTTGAGATTAAGCGGACGATACCGAGGGGAGCTGTTGGCTCTAAGGATTTTAGGACAAAGAAAATTTTTGTAGGTGGAATTCCTTCAAATGTGACTGAAGATGAATTTAGAGACTTCTTTACACGCTATGGCGAAGTTAAAGATCACCAAATAATGCGGGACCACTCTACCAACCGATCTCGTGGCTTTGGGTTTATCACATTTGACTCTGAAGAAGCAGTTGATGATCTGCTGTCCATGGGAAACAAAATTGACTTTGCTGGATCTCAGGTGGAAATCAAGAAAGCTGAACCAAAGAAGCCAAGCTCAGCGCCTCCATCATCCAAGCGCCATAACGACTCTAGGTCTTCATATAGCAGTGGTGGATATGGAGATACTTACGATGGATTTGGTGGCAGCTTTGGAATGGGGGGTGGGTATAGGTCAGGTGGTGCTTATGGTGGTGGTAGGGGTGGTGCTTATGGTGGCTTTGGAAGTGAATTTGGTGGGTATGGAGGATATGCTGGTGAGATGGGGCCGTATAGAGGAGATCTCTCCCTCGGGTATGCTGGTCGTTATGGTGGAAACTTTAGCAGAGGGTATGATCTTGGTGGGTATGGCGGTCCTAGTGAGAATTATGGAGCATATGGTGCAGGTGGGGGTTCTTCTGGCGGTGGTGGTGCCTACCAAAGTGGCTATGATGGAAACCTAGGAGGTGGATATGGAGGGGCTAGTGGTGGCCCCTTCTATGGGAGCAGTAGAGCAGGATACAGTGCTGGTCGATATCATCCTTATGGAAGATAA
Predicted protein sequences of Glyma.05g003400
>Glyma.05g003400.1.p sequence-type=predicted peptide transcript=Glyma.05g003400.1 locus=Glyma.05g003400 id=Glyma.05g003400.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MESPGNEHVVGGAEHNDVVTPFSHREEPHNSQPLTGDGASPGKIFIGGLARETTIAQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFITYADPSVVDKVIEDPHIINGKQVEIKRTIPRGAVGSKDFRTKKIFVGGIPSNVTEDEFRDFFTRYGEVKDHQIMRDHSTNRSRGFGFITFDSEEAVDDLLSMGNKIDFAGSQVEIKKAEPKKPSSAPPSSKRHNDSRSSYSSGGYGDTYDGFGGSFGMGGGYRSGGAYGGGRGGAYGGFGSEFGGYGGYAGEMGPYRGDLSLGYAGRYGGNFSRGYDLGGYGGPSENYGAYGAGGGSSGGGGAYQSGYDGNLGGGYGGASGGPFYGSSRAGYSAGRYHPYGR*

>Glyma.05g003400.2.p sequence-type=predicted peptide transcript=Glyma.05g003400.2 locus=Glyma.05g003400 id=Glyma.05g003400.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MWWVAQNITTSLRPFPTEKNPTIPNPSPATVPVPAQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFITYADPSVVDKVIEDPHIINGKQVEIKRTIPRGAVGSKDFRTKKIFVGGIPSNVTEDEFRDFFTRYGEVKDHQIMRDHSTNRSRGFGFITFDSEEAVDDLLSMGNKIDFAGSQVEIKKAEPKKPSSAPPSSKRHNDSRSSYSSGGYGDTYDGFGGSFGMGGGYRSGGAYGGGRGGAYGGFGSEFGGYGGYAGEMGPYRGDLSLGYAGRYGGNFSRGYDLGGYGGPSENYGAYGAGGGSSGGGGAYQSGYDGNLGGGYGGASGGPFYGSSRAGYSAGRYHPYGR*






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