SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.05g002700

Feature Type:gene_model
Chromosome:Gm05
Start:193498
stop:198523
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.05g002700
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G25580.1AT ANAC008,SOG1 JGI N/AIEA
GO:0006355GO-bp regulation of transcription, DNA-templated JGI N/AIEA
GO:0003677GO-mf DNA binding JGI N/AIEA
PTHR31079PantherFam NAC DOMAIN-CONTAINING PROTEIN 73 JGI N/AIEA
PTHR31079:SF2PantherFam NAC DOMAIN CONTAINING PROTEIN 85-RELATED JGI N/AIEA
PF02365Pfam No apical meristem (NAM) protein JGI N/AIEA

Proteins Associated with Glyma.05g002700
LocusGene SymbolProtein Name
NAC025 NAC Transcription Factor gene 25

Gene model name correspondences to Glyma.05g002700 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma05g09110 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.05g002700
>Glyma.05g002700.1 sequence-type=CDS polypeptide=Glyma.05g002700.1.p locus=Glyma.05g002700 id=Glyma.05g002700.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCTAGGAGCTGGCTTATTGACATTGGAGGATTTGCAAGGAAAGTGAAAAATACTAATCTGTCAACAGATGATCAAATAAAGGACTGTGGAACATATCTTGAATGCCAGAAATGTCATTATCATATTGATAACAATGATGTTTCTCATGAGTGGCCTGGCTTTCCTGTGGGTGTGAAGTTTGATCCTTCTGATGTTGAGCTTTTAGAGCATTTAGCAGCAAAGTGTTGTATTGGAGACAGAGAGCCACACATGTTTATTCACGAGTTCATCCCAACTCTAGAAGGAGAGCTAGGTATTTGCTACACTCATCCACAAAATCTTCCAGGTGCTAAGACGGATGGGAGTAGTGTCCATTTCTTTCACAAAACAGTTAATGCATATGCTACTGGACCAAGGAAGCGTCGAAAGATTCATCATCAAGATGGTATGACTGAGGAGCATGTACGCTGGCACAAGACTGGTAGGACCAAAGCTGTGATAGAAGATGGAGTGCATAAGGGTTTTAAGAAGATCATGGTTCTCTATATAAGATCTAAGAAAGGCTCCAAACCATATAAAACCAATTGGGTGATGCATCAGTACCATCTAGGGAGTGAAGAAGATGAGAAGGATGATGAATATGTGGTTTCAAAAATATTTTATCAACGGCAGAAGCAGAGTGAGAAGAATGAGGAGAATACAGTGGTTGAAGATTCTAACATAGCAGCACAAGCAGGTCCAAGAACCCCAAAACCAAATCCCCCTACTCGACCTTGTACGGGAAAATGTGATGACAATTTTGATGAAAATGAACTTCTGTCATTCATCCAGGATGCCAAGCCTATACCTGGAGAATCACATGCACCACCATACGATGTTCAAGATGAGGACAATAAGGACGACCCTGCATGGTTGGCTGGTGAATCACAAGCTGACTTTGATGGCTTGGAAGACATATTATTATGTAAGGATATGTTAGATTCATCTTCTCTCTTAAACCATTCTGGATTGAGCTCCACTTATAATGCCAATGCAAACAAGTTGGTTGCACCTGGAACCGATAATGATTATGCATCTTATGGAGTTTCTGTCCTGGACACCCTTGAATTTGATACTCCTCCTGATTTTGATCTTTCTAATTTGCAATTTGGTTCTCAAGACAGCACCCTTCAGTGGATTGACACACCATAA

>Glyma.05g002700.2 sequence-type=CDS polypeptide=Glyma.05g002700.2.p locus=Glyma.05g002700 id=Glyma.05g002700.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCTAGGAGCTGGCTTATTGACATTGGAGGATTTGCAAGGAAAGTGAAAAATACTAATCTGTCAACAGATGATCAAATAAAGGACTGTGGAACATATCTTGAATGCCAGAAATGTCATTATCATATTGATAACAATGATGTTTCTCATGAGTGGCCTGGCTTTCCTGTGGGTGTGAAGTTTGATCCTTCTGATGTTGAGCTTTTAGAGCATTTAGCAGCAAAGTGTTGTATTGGAGACAGAGAGCCACACATGTTTATTCACGAGTTCATCCCAACTCTAGAAGGAGAGCTAGGTATTTGCTACACTCATCCACAAAATCTTCCAGGTGCTAAGACGGATGGGAGTAGTGTCCATTTCTTTCACAAAACAGTTAATGCATATGCTACTGGACCAAGGAAGCGTCGAAAGATTCATCATCAAGATGGTATGACTGAGGAGCATGTACGCTGGCACAAGACTGGTAGGACCAAAGCTGTGATAGAAGATGGAGTGCATAAGGGTTTTAAGAAGATCATGGTTCTCTATATAAGATCTAAGAAAGGCTCCAAACCATATAAAACCAATTGGGTGATGCATCAGTACCATCTAGGGAGTGAAGAAGATGAGAAGGATGATGAATATGTGGTTTCAAAAATATTTTATCAACGGCAGAAGCAGAGTGAGAAGAATGAGGAGAATACAGTGGTTGAAGATTCTAACATAGCAGCACAAGCAGGTCCAAGAACCCCAAAACCAAATCCCCCTACTCGACCTTGTACGGGAAAATGTGATGACAATTTTGATGAAAATGAACTTCTGTCATTCATCCAGGATGCCAAGCCTATACCTGGAGAATCACATGCACCACCATACGATGTTCAAGATGAGGACAATAAGGACGACCCTGCATGGTTGGCTGGTGAATCACAAGCTGACTTTGATGGCTTGGAAGACATATTATTATGTAAGGATATGTTAGATTCATCTTCTCTCTTAAACCATTCTGGATTGAGCTCCACTTATAATGCCAATGCAAACAAGTTGGTTGCACCTGGAACCGATAATGATTATGCATCTTATGGAGTTTCTGTCCTGGACACCCTTGAATTTGATACTCCTCCTGATTTTGATCTTTCTGTAAGCATCAACTTACTCTTCTAG

>Glyma.05g002700.3 sequence-type=CDS polypeptide=Glyma.05g002700.3.p locus=Glyma.05g002700 id=Glyma.05g002700.3.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCTAGGAGCTGGCTTATTGACATTGGAGGATTTGCAAGGAAAGTGAAAAATACTAATCTGTCAACAGATGATCAAATAAAGGACTGTGGAACATATCTTGAATGCCAGAAATGTCATTATCATATTGATAACAATGATGTTTCTCATGAGTGGCCTGGCTTTCCTGTGGGTGTGAAGTTTGATCCTTCTGATGTTGAGCTTTTAGAGCATTTAGCAGCAAAGTGTTGTATTGGAGACAGAGAGCCACACATGTTTATTCACGAGTTCATCCCAACTCTAGAAGGAGAGCTAGGTATTTGCTACACTCATCCACAAAATCTTCCAGGTGCTAAGACGGATGGGAGTAGTGTCCATTTCTTTCACAAAACAGTTAATGCATATGCTACTGGACCAAGGAAGCGTCGAAAGATTCATCATCAAGATGGTATGACTGAGGAGCATGTACGCTGGCACAAGACTGGTAGGACCAAAGCTGTGATAGAAGATGGAGTGCATAAGGGTTTTAAGAAGATCATGGTTCTCTATATAAGATCTAAGAAAGGCTCCAAACCATATAAAACCAATTGGGTGATGCATCAGTACCATCTAGGGAGTGAAGAAGATGAGAAGGATGATGAATATGTGGTTTCAAAAATATTTTATCAACGGCAGAAGCAGAGTGAGAAGAATGAGGAGAATACAGTGGTTGAAGATTCTAACATAGCAGCACAAGCAGGTCCAAGAACCCCAAAACCAAATCCCCCTACTCGACCTTGTACGGGAAAATGTGATGACAATTTTGATGAAAATGAACTTCTGTCATTCATCCAGGATGCCAAGCCTATACCTGGAGAATCACATGCACCACCATACGATGTTCAAGATGAGGACAATAAGGACGACCCTGCATGGTTGGCTGGTGAATCACAAGCTGACTTTGATGGCTTGGAAGACATATTATTATAA
Predicted protein sequences of Glyma.05g002700
>Glyma.05g002700.1.p sequence-type=predicted peptide transcript=Glyma.05g002700.1 locus=Glyma.05g002700 id=Glyma.05g002700.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MARSWLIDIGGFARKVKNTNLSTDDQIKDCGTYLECQKCHYHIDNNDVSHEWPGFPVGVKFDPSDVELLEHLAAKCCIGDREPHMFIHEFIPTLEGELGICYTHPQNLPGAKTDGSSVHFFHKTVNAYATGPRKRRKIHHQDGMTEEHVRWHKTGRTKAVIEDGVHKGFKKIMVLYIRSKKGSKPYKTNWVMHQYHLGSEEDEKDDEYVVSKIFYQRQKQSEKNEENTVVEDSNIAAQAGPRTPKPNPPTRPCTGKCDDNFDENELLSFIQDAKPIPGESHAPPYDVQDEDNKDDPAWLAGESQADFDGLEDILLCKDMLDSSSLLNHSGLSSTYNANANKLVAPGTDNDYASYGVSVLDTLEFDTPPDFDLSNLQFGSQDSTLQWIDTP*

>Glyma.05g002700.2.p sequence-type=predicted peptide transcript=Glyma.05g002700.2 locus=Glyma.05g002700 id=Glyma.05g002700.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MARSWLIDIGGFARKVKNTNLSTDDQIKDCGTYLECQKCHYHIDNNDVSHEWPGFPVGVKFDPSDVELLEHLAAKCCIGDREPHMFIHEFIPTLEGELGICYTHPQNLPGAKTDGSSVHFFHKTVNAYATGPRKRRKIHHQDGMTEEHVRWHKTGRTKAVIEDGVHKGFKKIMVLYIRSKKGSKPYKTNWVMHQYHLGSEEDEKDDEYVVSKIFYQRQKQSEKNEENTVVEDSNIAAQAGPRTPKPNPPTRPCTGKCDDNFDENELLSFIQDAKPIPGESHAPPYDVQDEDNKDDPAWLAGESQADFDGLEDILLCKDMLDSSSLLNHSGLSSTYNANANKLVAPGTDNDYASYGVSVLDTLEFDTPPDFDLSVSINLLF*

>Glyma.05g002700.3.p sequence-type=predicted peptide transcript=Glyma.05g002700.3 locus=Glyma.05g002700 id=Glyma.05g002700.3.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MARSWLIDIGGFARKVKNTNLSTDDQIKDCGTYLECQKCHYHIDNNDVSHEWPGFPVGVKFDPSDVELLEHLAAKCCIGDREPHMFIHEFIPTLEGELGICYTHPQNLPGAKTDGSSVHFFHKTVNAYATGPRKRRKIHHQDGMTEEHVRWHKTGRTKAVIEDGVHKGFKKIMVLYIRSKKGSKPYKTNWVMHQYHLGSEEDEKDDEYVVSKIFYQRQKQSEKNEENTVVEDSNIAAQAGPRTPKPNPPTRPCTGKCDDNFDENELLSFIQDAKPIPGESHAPPYDVQDEDNKDDPAWLAGESQADFDGLEDILL*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo