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Report for Sequence Feature Glyma.05g002300

Feature Type:gene_model
Chromosome:Gm05
Start:176439
stop:181292
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.05g002300
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G14460.1AT JGI N/AIEA
5.4.99.25EC tRNA pseudouridine55 synthase JGI N/AIEA
GO:0001522GO-bp pseudouridine synthesis JGI N/AIEA
GO:0006396GO-bp RNA processing JGI N/AIEA
GO:0009451GO-bp RNA modification JGI N/AIEA
GO:0003723GO-mf RNA binding JGI N/AIEA
GO:0009982GO-mf pseudouridine synthase activity JGI N/AIEA
K03177KEGG Transfer RNA biogenesis JGI N/AIEA
KOG2529 KOG Pseudouridine synthase JGI N/AIEA
PTHR13767PantherFam TRNA-PSEUDOURIDINE SYNTHASE JGI N/AIEA
PTHR13767:SF2PantherFam TRNA PSEUDOURIDINE SYNTHASE 1-RELATED JGI N/AIEA
PF01509Pfam TruB family pseudouridylate synthase (N terminal domain) JGI N/AIEA
PF16198Pfam tRNA pseudouridylate synthase B C-terminal domain JGI N/AIEA

Gene model name correspondences to Glyma.05g002300 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma05g09150 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.05g002300
>Glyma.05g002300.1 sequence-type=CDS polypeptide=Glyma.05g002300.1.p locus=Glyma.05g002300 id=Glyma.05g002300.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGCTGAAAGCAAGCTCTCTATCCTTTCTGGTAGCAATGCCCTCTGCAACTGCAAGCTTCGGATTCTTCTTCTGTCGACAACGCCTTTCTTCTTCTTTCCCCTTCCCTCCGCGTCCAAGACTCCTCTCCACCACTCCCACCCCATACCCTCTCCAATACGAACTCATCATCAACCGTCCTTCTTACCCCGACTCTCCCCGCCCACCACCTGCTCGACCTATTGACTCCCCTGAACCCGAACTCAACAAGGCCCAGAGGAAGTACTACAACAAACGCAGAAAGAGGATGTACGGCTCCGACGAAGATGAATCCCGACGCCCCGACGAGACCTTCGTGGAGTTGAAGCCCGAGGTGGTGGACTTTCCCACTCTGCACAAGAGGGAGGAAGAGCTTTACTTCTATGACGCCTTTACTTATCCCTGGGAGAAGGACAAGCATTACAAGATGGTTTACCAGCTGGAGAAGAAGTACTTTCCTGATCAATGCCTCGACAAGGCGTTTCTCCAACCGGGACAGTCAAATGCTAATGCTAATGGGAAGGGAAAGGGTAGGAAGAAAGTTGTTGGTGGTGGCGGTGGTGAGGAAAAGTTGGTGTTTTTTGAGGAGGGGAATGTGGAGGAGAAGGGCGAGGAGAGTGGAAGTGGAAGCAGACAACTTAAGGAGAAGAAGGTTGAGGACTTCTTCAAGGGTTTGAAGAAGGATCCTAGTCCTAGTCTTAACAAGGATGTTCAAGTTGGAGAGCCTTTTCTTTCCTCAAGGAGGACTGGTCTTCCTCCCGTCTGGGATACTCCTCATGGCACTGTGCTCTTGGTCAACAAACCAAAAGGTTGGACTTCATTCACGGTTTGTGGAAAGCTGCGTCGCCTTGTCAAAGTGAAAAAGGTAGGTCATGCTGGGACTCTTGACCCAATGGCTACGGGTTTATTGATTGTTTGTGTTGGTAAAGCAACGAAACTGGTAGACAGATATCAAGGGATGATTAAGGGTTATAGTGGGGTTTTCCGCTTGGGGGAGGCTACTTCAACATGGGATGCTGATTCACCAGTCATTCAACGTGAGCCATGGGAGCACATCAAAGATGAAGATATAAAGAGAAATGCTTTGTCCTTTTCTGGGGAGATTTGGCAAGTTCCTCCTATGTTCTCAGCTATTAAAGTTGGAGGCGAAAAGATGTATGAGAAAGCAAGGAGAGGAGAAAGCATTGAACTTTCACCCAGACGAATATCAATTTTCCAGTTTGACATAGAGCGTAGCTTGGATGACAGACAAAATTTGATTTTTAGAGTGACATGTTCCAAAGGGACATATATTCGGTCACTCTGCGCTGATTTTGGGAAGGCTCTTGGCAGCTGTGCCCATTTAACTGCTCTCCGAAGAGATTCAATTGGGCAATATTCAGCAGATGATGCATGGGAGTTTCAAGAGCTGGAAGAGGCTATCACCAAAAATTATCTCTAA
Predicted protein sequences of Glyma.05g002300
>Glyma.05g002300.1.p sequence-type=predicted peptide transcript=Glyma.05g002300.1 locus=Glyma.05g002300 id=Glyma.05g002300.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MLKASSLSFLVAMPSATASFGFFFCRQRLSSSFPFPPRPRLLSTTPTPYPLQYELIINRPSYPDSPRPPPARPIDSPEPELNKAQRKYYNKRRKRMYGSDEDESRRPDETFVELKPEVVDFPTLHKREEELYFYDAFTYPWEKDKHYKMVYQLEKKYFPDQCLDKAFLQPGQSNANANGKGKGRKKVVGGGGGEEKLVFFEEGNVEEKGEESGSGSRQLKEKKVEDFFKGLKKDPSPSLNKDVQVGEPFLSSRRTGLPPVWDTPHGTVLLVNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKGYSGVFRLGEATSTWDADSPVIQREPWEHIKDEDIKRNALSFSGEIWQVPPMFSAIKVGGEKMYEKARRGESIELSPRRISIFQFDIERSLDDRQNLIFRVTCSKGTYIRSLCADFGKALGSCAHLTALRRDSIGQYSADDAWEFQELEEAITKNYL*






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