SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research



Report for Sequence Feature Glyma.05g001100

Feature Type:gene_model
Chromosome:Gm05
Start:95865
stop:98064
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
ATCG00810.1AT JGI N/AIEA
GO:0006412GO-bp translation JGI N/AIEA
GO:0005840GO-cc ribosome JGI N/AIEA
GO:0015934GO-cc large ribosomal subunit JGI N/AIEA
GO:0003735GO-mf structural constituent of ribosome JGI N/AIEA
K02890KEGG Ribosome JGI N/AIEA
PTHR13501PantherFam CHLOROPLAST 50S RIBOSOMAL PROTEIN L22-RELATED JGI N/AIEA
PF00237Pfam Ribosomal protein L22p/L17e JGI N/AIEA

Corresponding NameAnnotation VersionEvidenceComments
Glyma05g09270 Wm82.a1.v1.1IGC As supplied by JGI


>Glyma.05g001100.1 sequence-type=CDS polypeptide=Glyma.05g001100.1.p locus=Glyma.05g001100 id=Glyma.05g001100.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCCGTTTCTTTGGCAGTGAACCGTCCTCTGCTTGGTCTTCACGAGAATGTACCATTAGCTGTTGCTCATCCCCAATTCCTCCCGTTCAAATGGCCACCCAAGTCCAAACTCCCCTCCGTCGTCGGAATTCGATGCTCCTCCTCCCCTTTCAACGACAAAACCCTCATTTCCATCACACCTAACACTTCCCACCTCAATCCCAACCCTCTCGCTTGTCGCTTTCACGCTTCCCAGTTTGGAGAACAGGAGAGCAACAAATACGTGGAAGCCTATGCTGTAGGACGAAATATTCGTATGTCTGCTAATAAAGCTCGGAGAGTGATCGATCAGATTCGTGGACGTAAATATGACGAAACACTTATGGTATTAGAACTCATGCCTTATCGAGCCTGTGAAGCCATTCTCAAAATAGTGTTTTCGGCTGGAGCTAATGCTAGCAATAATCTGGGTTTAAGCAAAGGAAGTTTAGTTATCAGTAAAGCAGAGGTTAATGAAGGGAAAACAATGAAAAGGGTAAAACCTGTAGCTCGAGGGCGTGCCCATCCAATTAAAAAGCGCACTTGTCATATAACCATCACGGTAAAAGGCTTACCTAGTGAGTCCGTCGTGGAAGCAAAGCCTGCTTAA

>Glyma.05g001100.1.p sequence-type=predicted peptide transcript=Glyma.05g001100.1 locus=Glyma.05g001100 id=Glyma.05g001100.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MAVSLAVNRPLLGLHENVPLAVAHPQFLPFKWPPKSKLPSVVGIRCSSSPFNDKTLISITPNTSHLNPNPLACRFHASQFGEQESNKYVEAYAVGRNIRMSANKARRVIDQIRGRKYDETLMVLELMPYRACEAILKIVFSAGANASNNLGLSKGSLVISKAEVNEGKTMKRVKPVARGRAHPIKKRTCHITITVKGLPSESVVEAKPA*







Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo