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Report for Sequence Feature Glyma.05G091300

Feature Type:gene_model
Chromosome:Gm05
Start:22016429
stop:22019698
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.05G091300
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G66140.1AT proteasome alpha subunit D2 JGI N/AIEA
GO:0005975GO-bp carbohydrate metabolic process JGI N/AIEA
GO:0006511GO-bp ubiquitin-dependent protein catabolic process EnsemblGenomesN/AIEA
GO:0006511GO-bp ubiquitin-dependent protein catabolic process JGI N/AIEA
GO:0005634GO-cc nucleus EnsemblGenomesN/AIEA
GO:0019773GO-cc proteasome core complex, alpha-subunit complex EnsemblGenomesN/AIEA
GO:0019773GO-cc proteasome core complex, alpha-subunit complex JGI N/AIEA
GO:0004175GO-mf endopeptidase activity EnsemblGenomesN/AIEA
GO:0004175GO-mf endopeptidase activity JGI N/AIEA
GO:0004553GO-mf hydrolase activity, hydrolyzing O-glycosyl compounds JGI N/AIEA
PTHR11599Panther PROTEASOME SUBUNIT ALPHA/BETA JGI N/AIEA
PTHR11599:SF15Panther PROTEASOME SUBUNIT ALPHA TYPE JGI N/AIEA
PF00232PFAM Glycosyl hydrolase family 1 JGI N/AIEA
PF10584PFAM Proteasome subunit A N-terminal signature JGI N/AIEA

Expression Patterns of Glyma.05G091300
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.05G091300 not represented in the dataset
Glyma.05G091300 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.



Coding sequences of Glyma.05G091300
>Glyma.05g091300.1 sequence-type=CDS polypeptide=Glyma.05g091300.1.p locus=Glyma.05g091300 ID=Glyma.05g091300.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCTAGGTACGACCGAGCAATCACTGTGTTCTCCCCCGACGGCCATCTCTTCCAGGTCCAGTATGCCCTCAAAGCCGTCCGCAAGGGCAACGCCATCATCGGCATCCGCGACATCGACAACGTCGTCCTTGGCATCGAGAAGAAATCCAACGCCAAACTCCAAGACTCCAGAGGAATTCGTGACTTTTTGTTATTTACCAAGGAAAAGTACAATAATCCATTGATTTACATCACTGAAAATGAAAGATATGAGGAATGGTCACTCCAATTGGCTTCAAAGGAACAAAAGATAGCCGATGAGAATGTCTTAAGGCTTGTTGAAGAGCAAAAGCGAGAGAAAGAGGAGGCCTATAACAAGATACTTCATTTGGAAAAACAACTAGATTTCTCTATCCATATAAAACTTGCAACTACCATTTCGTCTTTGGCCTTCGATAAATTGTTTGGGCTGCAAGATTGA
Predicted protein sequences of Glyma.05G091300
>Glyma.05g091300.1.p sequence-type=predicted peptide transcript=Glyma.05g091300.1 locus=Glyma.05g091300 ID=Glyma.05g091300.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MARYDRAITVFSPDGHLFQVQYALKAVRKGNAIIGIRDIDNVVLGIEKKSNAKLQDSRGIRDFLLFTKEKYNNPLIYITENERYEEWSLQLASKEQKIADENVLRLVEEQKREKEEAYNKILHLEKQLDFSIHIKLATTISSLAFDKLFGLQD*






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