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Report for Sequence Feature Glyma.05G079200

Feature Type:gene_model
Chromosome:Gm05
Start:10866069
stop:10868709
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.05G079200
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G04760.1AT vesicle-associated membrane protein 726 JGI N/AIEA
GO:0006810GO-bp transport EnsemblGenomesN/AIEA
GO:0016192GO-bp vesicle-mediated transport EnsemblGenomesN/AIEA
PTHR21136Panther SNARE PROTEINS JGI N/AIEA
PTHR21136:SF46Panther JGI N/AIEA

Expression Patterns of Glyma.05G079200
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.05G079200 not represented in the dataset
Glyma.05G079200 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.



Coding sequences of Glyma.05G079200
>Glyma.05g079200.1 sequence-type=CDS polypeptide=Glyma.05g079200.1.p locus=Glyma.05g079200 ID=Glyma.05g079200.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGTTGTGTAGAGTATGTCTCTCTCCTCAGATCTTTCTCTCACTCTCCAACAATCGAAATCCAAAACCCTACCAACACCACACTCAATCGAAATTCTTCATTCTCTTCTCATCGATGGGGCAGAAGTCTCTGATCTACACGTTCGTGTCGCGGGGAACAGTGATTCTCGCGGAGTACACCGAATTCAGCGGAAACTTCAACTCCAACGCCTTCCAGTGCCTTCAGAAGCTCCCTGCCACCAACAACAAGTTCACCTACAATTGCGCACACACCTTCAATTACCTCGTCGACAATGGCTACAGTTGGGAGTGTGATAAAGAGTCCAGAAATATCTGGTCTTGTCCCTACTCTACTTAA
Predicted protein sequences of Glyma.05G079200
>Glyma.05g079200.1.p sequence-type=predicted peptide transcript=Glyma.05g079200.1 locus=Glyma.05g079200 ID=Glyma.05g079200.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MLCRVCLSPQIFLSLSNNRNPKPYQHHTQSKFFILFSSMGQKSLIYTFVSRGTVILAEYTEFSGNFNSNAFQCLQKLPATNNKFTYNCAHTFNYLVDNGYSWECDKESRNIWSCPYST*






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