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Report for Sequence Feature Glyma.05G064100

Feature Type:gene_model
Chromosome:Gm05
Start:6241818
stop:6247233
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.05G064100
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G76040.2AT calcium-dependent protein kinase 29 JGI N/AIEA
AT3G20410.1AT calmodulin-domain protein kinase 9 JGI N/AIEA
AT4G04710.1AT calcium-dependent protein kinase 22 JGI N/AIEA
GO:0005509GO-mf calcium ion binding EnsemblGenomesN/AIEA
GO:0005509GO-mf calcium ion binding JGI N/AIEA
PTHR24349Panther SERINE/THREONINE-PROTEIN KINASE JGI N/AIEA
PTHR24349:SF13Panther JGI N/AIEA
PF00036PFAM EF hand JGI N/AIEA

Expression Patterns of Glyma.05G064100
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.05G064100 not represented in the dataset
Glyma.05G064100 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.05G064100 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma.05g064100 Wm82.a4.v1ISS As supplied by JGI
Glyma05g05221 Wm82.a1.v1.1IGC As supplied by JGI


Transcripts of Glyma.05G064100
>Glyma.05g064100.2 sequence-type=transcript locus=Glyma.05g064100 ID=Glyma.05g064100.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
TTTCAACTCTTTTTTCTCTCTCTCTCTCTTTGGCGAATGAACCATTCTCTTCCTCTCCGATCCGAAACCCATCACTTCTAACACCTGCAGATCTCCCTCTCTCAACCTCACTCCACACCTTACACCAAAGTCTCCCAAACTTTCCATCGCTTATTATTCCCTTTTTACTCTTTCTCTCTTCTCACCTTTCTGCAATTGCTTCTCTAGGGTTTCTCCGAGGCGACGGATTTTCCAATTGTATCCGGCCTTTCAATTGGATTGAATGACTGTATGGCGGCACCTAGGCTATGACTTCAAGCATGTTGAGTGGGGAGTGAAGtgtttgcttcgttgaatggcgctagcttccaccaagccaccgcccaaccacagttgttcttggttgtagtcgtagatccgggcttaCCAGTGTGCTTTTTCTTGTTCTCTTCTCTTTCCATTTTTCTCTGGTATGGAGCATTTGAGCCACAACTTTCTTGGCAATTTGCCTATTTGAGTCAACCAGTCATAATAAAATGTtatatatatatatatatatatatataACTCCATATCATCCTTGGATGAGAGAAGATGGagcatctgataaacctcgatctagatgtttttgttttatccagaatgaaacaatttaggacaatgaacaagctaaagaaagctgctctgaagGAAATGTTTAAATCCATGGACATAGATAATAGTGGAACAATCACTTTTGAAGAGTTGAAAGCTGGTCTGCCAAAACTGGGTACTAAGGTTTCTGAGTCTGAAGTAAGGCAATTGATGGAAGCGGTTTATCTTTGGGAGTTCTCAATCTTGCAATTGTGGTACCACAGCCAGTATTATATAGTAGGAGGAAAGTTTATAGGACTGGCTTAATTGtttggcaaaggcagatacggagaggacacttgaggaaaagatgttgtggctgatagagagtcatgatcacgtagtcaggtgatgtggatggaaccgagcaccatgttgacaatgctcaagttgatcattgactcttggctattgttttagtttgattatgtcatgttagttatgaatttaaactatattaaactttcacattgcattttattaaactttgaattttcactttgtcaatatttaattagaattttgttattagatgtatttacagattatgaatgttcacttttatatataagtttgattatatagtttaattaaaaattatattt

>Glyma.05g064100.3 sequence-type=transcript locus=Glyma.05g064100 ID=Glyma.05g064100.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
AACCTTTCTGAAGAAGAAATCATTGGTTTGAAGGAAATGTTTAAATCCATGGACATAGATAATAGTGGAACAATCACTTTTGAAGAGTTGAAAGCTGGTCTGCCAAAACTGGGTACTAAGGTTTCTGAGTCTGAAGTAAGGCAATTGATGGAAGCGGTTTATCTTTGGGAGTTCTCAATCTTGCAATTGTGGTACCACAGGTTAGAACCCACTTACTCATATATTAAACAGCTTGGAGGTTGGGACTGACCTATTATGACGTTATCGTTCTCCAGAATACCTATTATGACGTTATCGTTCTCCAGAATATTAACAGCTTGAAAGTACAAAACCAAGAGTTTTAATTGTGAATTAAGAGGCATTTTTGCCTATTATTGTTGTTTGGTTGAGAAATAAAATTGATCATTTTTAAGATGTGCACTGCACAACTCATCATATAACTAT
Coding sequences of Glyma.05G064100
>Glyma.05g064100.1 sequence-type=CDS polypeptide=Glyma.05g064100.1.p locus=Glyma.05g064100 ID=Glyma.05g064100.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGACTGTATGGCGGCACCTAGGCTATGACTTCAAGCATGTTGAGTGGGGAGTGAAGGAAATGTTTAAATCCATGGACATAGATAATAGTGGAACAATCACTTTTGAAGAGTTGAAAGCTGGTCTGCCAAAACTGGGTACTAAGGTTTCTGAGTCTGAAGTAAGGCAATTGATGGAAGCGGTTTATCTTTGGGAGTTCTCAATCTTGCAATTGTGGTACCACAGCCAGTATTATATAGTAGGAGGAAAGTTTATAGGACTGGCTTAA

>Glyma.05g064100.2 sequence-type=CDS polypeptide=Glyma.05g064100.2.p locus=Glyma.05g064100 ID=Glyma.05g064100.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGAAACAATTTAGGACAATGAACAAGCTAAAGAAAGCTGCTCTGAAGGAAATGTTTAAATCCATGGACATAGATAATAGTGGAACAATCACTTTTGAAGAGTTGAAAGCTGGTCTGCCAAAACTGGGTACTAAGGTTTCTGAGTCTGAAGTAAGGCAATTGATGGAAGCGGTTTATCTTTGGGAGTTCTCAATCTTGCAATTGTGGTACCACAGCCAGTATTATATAGTAGGAGGAAAGTTTATAGGACTGGCTTAA

>Glyma.05g064100.3 sequence-type=CDS polypeptide=Glyma.05g064100.3.p locus=Glyma.05g064100 ID=Glyma.05g064100.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGTTTAAATCCATGGACATAGATAATAGTGGAACAATCACTTTTGAAGAGTTGAAAGCTGGTCTGCCAAAACTGGGTACTAAGGTTTCTGAGTCTGAAGTAAGGCAATTGATGGAAGCGGTTTATCTTTGGGAGTTCTCAATCTTGCAATTGTGGTACCACAGGTTAGAACCCACTTACTCATATATTAAACAGCTTGGAGGTTGGGACTGA
Predicted protein sequences of Glyma.05G064100
>Glyma.05g064100.1.p sequence-type=predicted peptide transcript=Glyma.05g064100.1 locus=Glyma.05g064100 ID=Glyma.05g064100.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MTVWRHLGYDFKHVEWGVKEMFKSMDIDNSGTITFEELKAGLPKLGTKVSESEVRQLMEAVYLWEFSILQLWYHSQYYIVGGKFIGLA*

>Glyma.05g064100.2.p sequence-type=predicted peptide transcript=Glyma.05g064100.2 locus=Glyma.05g064100 ID=Glyma.05g064100.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MKQFRTMNKLKKAALKEMFKSMDIDNSGTITFEELKAGLPKLGTKVSESEVRQLMEAVYLWEFSILQLWYHSQYYIVGGKFIGLA*

>Glyma.05g064100.3.p sequence-type=predicted peptide transcript=Glyma.05g064100.3 locus=Glyma.05g064100 ID=Glyma.05g064100.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
MFKSMDIDNSGTITFEELKAGLPKLGTKVSESEVRQLMEAVYLWEFSILQLWYHRLEPTYSYIKQLGGWD*






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