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Report for Sequence Feature Glyma.04g254600

Feature Type:gene_model
Chromosome:Gm04
Start:50937973
stop:50942336
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G12350.1AT ATCOAB,COAB JGI N/AIEA
6.3.2.5EC phosphopantothenate-cysteine ligase (CTP) JGI N/AIEA
K01922KEGG Pantothenate and CoA biosynthesis JGI N/AIEA
KOG2728 KOG Uncharacterized conserved protein with similarity to phosphopantothenoylcysteine synthetase/decarboxylase JGI N/AIEA
PTHR12290PantherFam CORNICHON-RELATED JGI N/AIEA
PTHR12290:SF2PantherFam PHOSPHOPANTOTHENATE--CYSTEINE LIGASE JGI N/AIEA
PF04127Pfam DNA / pantothenate metabolism flavoprotein JGI N/AIEA

Corresponding NameAnnotation VersionEvidenceComments
Glyma04g43390 Wm82.a1.v1.1IGC As supplied by JGI


>Glyma.04g254600.1 sequence-type=CDS polypeptide=Glyma.04g254600.1.p locus=Glyma.04g254600 id=Glyma.04g254600.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGATGCAGCAAAGGGATTGGAAGCTTCTGGGGAGACCCTTCGTGCAGAAGTGAAAACCTTTTTCGATTCTGCTCCTCCTTTGCAGAACAGTGATGAGATAACTCAGAAGTTGAATCAGTTCATTCAACGCAATTCTTCAGCTAGGAGAATTGTTTGTGTGACTTCTGGTGGCACCACCGCGCCATTGGAACAACGATGCGTTCGCTATGTTGACAATTTCAGTTCAGGTCACAGAGGGGCCACATCCACCGAGTATTTTCTGAAGGCTGGATATGCTGTTATCTTTCTGTACCGGAAGAGAAGTTTCCAGCCATTTTGTAGATCCCTTCCTGATGATCCCTTACTTGAATGCTTCAAGCCCAACCATGAGTCCAACATTCAAGTTTGCGAGGCTTATTCTGAAACAGTGAAGAGGGCTATCGTTGATCATCATACTGCAGTGGCAGGTGGTCTCTTGTTGAAACTTCCATTCAACACCATATTTGAGTATCTCCAGATGTTACAAACAATTGCAATGTCAATGAGGTGTATTGGTCCCCGTGCAATGTTCTATCTTGCTGCTGCAGTGTCTGACTATTATGTTCCTTGGAAGGAAATGGTAGAGCACAAAATTCAGTCAGGATCATCTCACCTTTTGGATGTGAAACTAGTTCAAGTGCCAAAAATGTTGTCAGTGCTTAGGAAAGATTGGGCTCCTCTGGCTTTCTGCATATCTTTCAAGTTAGAGACAGATTCAAACATTCTTCTAAATAAAGCTGGTGCAGCTCTTGAAAAGTACAAGATGCATGCAGTTGTTGCAAATGAACTCTCAACTCGCAAGGAGCAAGTGGTGGTTGTCACTAGTGCTGAGAAGGTTACTGTTCAGCGTGATAAGAGTCTGTCTGATAATGATGTAGAGAATCCCCTGATTAAACTTCTTTCGGAGAAACATGCCACTTACATTGAGGATTCTGGTAGATGA

>Glyma.04g254600.2 sequence-type=CDS polypeptide=Glyma.04g254600.2.p locus=Glyma.04g254600 id=Glyma.04g254600.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGATGCAGCAAAGGGATTGGAAGCTTCTGGGGAGACCCTTCGTGCAGAAGTGAAAACCTTTTTCGATTCTGCTCCTCCTTTGCAGAACAGTGATGAGATAACTCAGAAGTTGAATCAGTTCATTCAACGCAATTCTTCAGCTAGGAGAATTGTTTGTGTGACTTCTGGTGGCACCACCGCGCCATTGGAACAACGATGCGTTCGCTATGTTGACAATTTCAGTTCAGGTCACAGAGGGGCCACATCCACCGAGTATTTTCTGAAGGCTGGATATGCTGTTATCTTTCTGTACCGGAAGAGAAGTTTCCAGCCATTTTGTAGATCCCTTCCTGATGATCCCTTACTTGAATGCTTCAAGCCCAACCATGAGTCCAACATTCAAGTTTGCGAGGCTTATTCTGAAACAGTGAAGAGGGCTATCGTTGATCATCATACTGCAGTGGCAGGTGGTCTCTTGTTGAAACTTCCATTCAACACCATATTTGAGTATCTCCAGATGTTACAAACAATTGCAATGTCAATGAGGTGTATTGGTCCCCGTGCAATGTTCTATCTTGCTGCTGCAGTGTCTGACTATTATGTTCCTTGGAAGGAAATGGTAGAGCACAAAATTCAGTCAGGATCATCTCACCTTTTGGATGTGAAACTAGTTCAAGTGCCAAAAATGTTGTCAGTGCTTAGGAAAGATTGGGCTCCTCTGGCTTTCTGCATATCTTTCAAGTTAGAGACAGATTCAAACATTCTTCTAAATAAAGCTGGTGCAGCTCTTGAAAAGTACAAGATGCATGCAGTTGTTGCAAATGAACTCTCAACTCGCAAGGAGCAAGTGGTGGTTGTCACTAGTGCTGAGAAGGTTACTGTTCAGCGTGATAAGAGTCTGTCTGATAATGATGTAGAGAATCCCCTGATTAAACTTCTTTCGGAGAAACATGCCACTTACATTGAGGATTCTGGTAGATGA

>Glyma.04g254600.1.p sequence-type=predicted peptide transcript=Glyma.04g254600.1 locus=Glyma.04g254600 id=Glyma.04g254600.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MDAAKGLEASGETLRAEVKTFFDSAPPLQNSDEITQKLNQFIQRNSSARRIVCVTSGGTTAPLEQRCVRYVDNFSSGHRGATSTEYFLKAGYAVIFLYRKRSFQPFCRSLPDDPLLECFKPNHESNIQVCEAYSETVKRAIVDHHTAVAGGLLLKLPFNTIFEYLQMLQTIAMSMRCIGPRAMFYLAAAVSDYYVPWKEMVEHKIQSGSSHLLDVKLVQVPKMLSVLRKDWAPLAFCISFKLETDSNILLNKAGAALEKYKMHAVVANELSTRKEQVVVVTSAEKVTVQRDKSLSDNDVENPLIKLLSEKHATYIEDSGR*

>Glyma.04g254600.2.p sequence-type=predicted peptide transcript=Glyma.04g254600.2 locus=Glyma.04g254600 id=Glyma.04g254600.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MDAAKGLEASGETLRAEVKTFFDSAPPLQNSDEITQKLNQFIQRNSSARRIVCVTSGGTTAPLEQRCVRYVDNFSSGHRGATSTEYFLKAGYAVIFLYRKRSFQPFCRSLPDDPLLECFKPNHESNIQVCEAYSETVKRAIVDHHTAVAGGLLLKLPFNTIFEYLQMLQTIAMSMRCIGPRAMFYLAAAVSDYYVPWKEMVEHKIQSGSSHLLDVKLVQVPKMLSVLRKDWAPLAFCISFKLETDSNILLNKAGAALEKYKMHAVVANELSTRKEQVVVVTSAEKVTVQRDKSLSDNDVENPLIKLLSEKHATYIEDSGR*







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