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Report for Sequence Feature Glyma.04g254000

Feature Type:gene_model
Chromosome:Gm04
Start:50892065
stop:50896644
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.04g254000
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G19770.1AT ATVPS9A,VPS9,VPS9A JGI N/AIEA
KOG2319 KOG Vacuolar assembly/sorting protein VPS9 JGI N/AIEA
PTHR23101PantherFam RAB GDP/GTP EXCHANGE FACTOR JGI N/AIEA
PTHR23101:SF25PantherFam RAB5 GDP/GTP EXCHANGE FACTOR JGI N/AIEA
PF02204Pfam Vacuolar sorting protein 9 (VPS9) domain JGI N/AIEA

Gene model name correspondences to Glyma.04g254000 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma04g43330 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.04g254000
>Glyma.04g254000.1 sequence-type=CDS polypeptide=Glyma.04g254000.1.p locus=Glyma.04g254000 id=Glyma.04g254000.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGAAAACGCCGACGTTTTCTTGGGCTTACACGACTTCCTCGAGCGCATGCGGCAACCCTCCGCCGCTGAATTCGTCAAAGCAATCAAAAGTTTTATCGTTTCGTTTTCGAACAATGCTCCTGATCCCGATAGGGACAGTGCCACGGTTCAAGCTTTCCTCGCGAAAATGGAAGCGGATTTCAGTGCTCATCCACTTTGGGCTGGTTGCTCCGAAGAGGAACTCGCAAGTGCCGGTGAAGGACTTGAGAAGTATGTTATGACAAAGTTATTTGCTCGTGTATTTGCTTCACTTCCAGATGATGTAAAATTTGATGACCAACTTTCTGAGAAGATGGCTTTGATTCAACAATTTATTCGACCTGAAAATTTGGATATCAAGCCAGCATTTCAGAATGAATCATCATGGTTGCTTGCACAGAAAGAATTGCAGAAGATCAACATGTACAAGGCACCCAGGGATAAACTTGTCTGTATTCTGAATTGTTGCAGGGTTATTAGCAACTTGCTGCTTAATGCTTCGGTTGCTTCCAGAGAGAATCCTCCAGGAGCTGATGAATTTCTTCCTGTGCTTATTTATGTAACCATAAAGGCAAACCCTCCACAACTGCACTCAAATCTACTGTACATACAAAGGTTTAGACATCAATCTCGATTGGTTGCAGAAGCAGCATATTATTTTACAAACATGCTCTCTGCTGAGTCATTCATCTCTAACATCGATGCAAAAGCCATTTCAATGGATGAAGCTGAGTTTGAGGGAAACATGGAATTTGCTCGTGCTATGCTTTCAGGTATTTCGGCTGATACACAAGATCCTGGTTCACCTTATCAAAATAATGGACATCATACAAGAGCAGAACCCACTAAGCACAAAGCTTTGATTGATCATAACGACCCTGCACTACGAACTCCATCATCTGTTGTGAAATCAGAAAGCAAGAAAGTGACTTTTGCAGATGAATCATTGATCACAAAAGTTCCATCCCTCTCAGATTTGGAGAATAAAGGGGCAAGTATGATTTTAAAGGAGGACAAGTTGAATGCAGTTTTCGGGGAGTTTCCATATTTGTTTGCTAGTGTAGGTGACCTAACAGTAGGTGATGTTGAAGACCTGCTAAATAATTACAAACAACTTGTTTTCAAGTATGTCTCTCTTTCCAAAGGGTTAGGAATCTCTCCTACATCTCTTCCACCATCCAATTCCCAAGATAATTCTGAAGGCCATGCTGAAGTAGATTCTTCAGACGGTGGACCTCTAGATGACAATAATAAATCAGAAGAATCTATTGATACAACAGAGGATAGTTCAGATAAAGTTTCACTTGAGGAGAGGAAAATTGAATCTGGTCTGCCCAAGGATGAGCCAGTTGCTCCTGAGGGTGATGCCCCCCCTTAA
Predicted protein sequences of Glyma.04g254000
>Glyma.04g254000.1.p sequence-type=predicted peptide transcript=Glyma.04g254000.1 locus=Glyma.04g254000 id=Glyma.04g254000.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MENADVFLGLHDFLERMRQPSAAEFVKAIKSFIVSFSNNAPDPDRDSATVQAFLAKMEADFSAHPLWAGCSEEELASAGEGLEKYVMTKLFARVFASLPDDVKFDDQLSEKMALIQQFIRPENLDIKPAFQNESSWLLAQKELQKINMYKAPRDKLVCILNCCRVISNLLLNASVASRENPPGADEFLPVLIYVTIKANPPQLHSNLLYIQRFRHQSRLVAEAAYYFTNMLSAESFISNIDAKAISMDEAEFEGNMEFARAMLSGISADTQDPGSPYQNNGHHTRAEPTKHKALIDHNDPALRTPSSVVKSESKKVTFADESLITKVPSLSDLENKGASMILKEDKLNAVFGEFPYLFASVGDLTVGDVEDLLNNYKQLVFKYVSLSKGLGISPTSLPPSNSQDNSEGHAEVDSSDGGPLDDNNKSEESIDTTEDSSDKVSLEERKIESGLPKDEPVAPEGDAPP*






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