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Report for Sequence Feature Glyma.04g250400

Feature Type:gene_model
Chromosome:Gm04
Start:50509712
stop:50515720
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.04g250400
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G18340.1AT JGI N/AIEA
GO:0006289GO-bp nucleotide-excision repair JGI N/AIEA
GO:0006355GO-bp regulation of transcription, DNA-templated JGI N/AIEA
GO:0000439GO-cc transcription factor TFIIH core complex JGI N/AIEA
K03143KEGG DNA repair and recombination proteins JGI N/AIEA
KOG2487 KOG RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH, subunit TFB4 JGI N/AIEA
PTHR12831PantherFam TRANSCRIPTION INITIATION FACTOR IIH TFIIH , POLYPEPTIDE 3-RELATED JGI N/AIEA
PTHR12831:SF0PantherFam GENERAL TRANSCRIPTION FACTOR IIH SUBUNIT 3 JGI N/AIEA
PF03850Pfam Transcription factor Tfb4 JGI N/AIEA

Gene model name correspondences to Glyma.04g250400 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma04g42941 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.04g250400
>Glyma.04g250400.1 sequence-type=CDS polypeptide=Glyma.04g250400.1.p locus=Glyma.04g250400 id=Glyma.04g250400.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGCCTTCTGCTCCTTCCAAACTCTACGCAGATGACGTGAGCCTCCTCGTTGTGACGCTAGACACCAACCCTTTCTTCTGGAGCACTTTTCCCTTCCCCTTCGCCGAGTTCCTCTCTCAAGTACTCGCTTTTCTCAACACGATCTTGCTCCTAGGCCAGCTCAACCAGGTCATCGTCATCGCCACCGGATGCAACTCTTGCGGCTACGTTTACGATTCCACTTCCGACAAGAACCATGGCTCCACCACTGGTACAATGCCCGCGCTTTATTCCAATTTACTTCACAATCTCGACGAGTTTCTCGCTAGGGACCGGCAATTAGACGCCGACGCCTCTCACGCACCGGGAATCGTTCCTTCTTCGCTGTTATCGGGCTCCTTGTCCATGGCGCTTTGTTATATACAGAGAGCTTTTCGTTCGGGACCAATGCCTCCTCAGCCTCGGATTTTATGTTTGCAAGGGGCTGCTGATGGACCAGAACAGTATGTGGCAATCATGAATGCAATATTCTCTGCACAGCACTCTACAGTTCCTATAGATTCTTGTTATATTGGTTCAAACAATTCTGCATTCCTCCAGCAGGCTTCATACATAACTGGTGGAATATATTACAAGCCTCCCCAATTGGACGGGCTTTATCAATATCTTTCAACAGTGTTTGCAACTGATTTGCATTCTCGTGCATTTTTACGGCTTCCTAAATCTGTGGGTGTGGATTTTCGTGCCTCGTGTTTCTGCCATAAACAAACAATTGACATGGGCTATGTGTGTTCTGTATGCTTATCCATATTCTGTGAGCACCATGATAAGTGTTCAACCTGTGGGTCTGTATTTGGCCAGGCTCAACTAGATGCCTCAGCAGCCGACCGGCAAAGAAAGGCTTGA

>Glyma.04g250400.2 sequence-type=CDS polypeptide=Glyma.04g250400.2.p locus=Glyma.04g250400 id=Glyma.04g250400.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGCCTTCTGCTCCTTCCAAACTCTACGCAGATGACGTGAGCCTCCTCGTTGTGACGCTAGACACCAACCCTTTCTTCTGGAGCACTTTTCCCTTCCCCTTCGCCGAGTTCCTCTCTCAAGTACTCGCTTTTCTCAACACGATCTTGCTCCTAGGCCAGCTCAACCAGGTCATCGTCATCGCCACCGGATGCAACTCTTGCGGCTACGTTTACGATTCCACTTCCGACAAGAACCATGGCTCCACCACTGGTACAATGCCCGCGCTTTATTCCAATTTACTTCACAATCTCGACGAGTTTCTCGCTAGGGACCGGCAATTAGACGCCGACGCCTCTCACGCACCGGGAATCGTTCCTTCTTCGCTGTTATCGGGCTCCTTGTCCATGGCGCTTTGTTATATACAGAGAGCTTTTCGTTCGGGACCAATGCCTCCTCAGCCTCGGATTTTATGTTTGCAAGGGGCTGCTGATGGACCAGAACAGTATGTGGCAATCATGAATGCAATATTCTCTGCACAGCACTCTACAGTTCCTATAGATTCTTGTTATATTGGTTCAAACAATTCTGCATTCCTCCAGCAGGCTTCATACATAACTGGTGGAATATATTACAAGCCTCCCCAATTGGACGGGCTTTATCAATATCTTTCAACAGTGTTTGCAACTGATTTGCATTCTCGTGCATTTTTACGGCTTCCTAAATCTGTGGGTGTGGATTTTCGTGCCTCGTGTTTCTGCCATAAACAAACAATTGACATGGGCTATGTGTGTTCTGTATGCTTATCCATATTCTGTGAGCACCATGATAAGTGTTCAACCTGTGGGGGTTAG

>Glyma.04g250400.5 sequence-type=CDS polypeptide=Glyma.04g250400.5.p locus=Glyma.04g250400 id=Glyma.04g250400.5.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGCCTTCTGCTCCTTCCAAACTCTACGCAGATGACGTGAGCCTCCTCGTTGTGACGCTAGACACCAACCCTTTCTTCTGGAGCACTTTTCCCTTCCCCTTCGCCGAGTTCCTCTCTCAAGTACTCGCTTTTCTCAACACGATCTTGCTCCTAGGCCAGCTCAACCAGGTCATCGTCATCGCCACCGGATGCAACTCTTGCGGCTACGTTTACGATTCCACTTCCGACAAGAACCATGGCTCCACCACTGGTACAATGCCCGCGCTTTATTCCAATTTACTTCACAATCTCGACGAGTTTCTCGCTAGGGACCGGCAATTAGACGCCGACGCCTCTCACGCACCGGGAATCGTTCCTTCTTCGCTGTTATCGGGCTCCTTGTCCATGGCGCTTTGTTATATACAGAGAGCTTTTCGTTCGGGACCAATGCCTCCTCAGCCTCGGATTTTATGTTTGCAAGGGGCTGCTGATGGACCAGAACAGTATGTGGCAATCATGAATGCAATATTCTCTGCACAGCACTCTACAGTTCCTATAGATTCTTGTTATATTGGTTCAAACAATTCTGCATTCCTCCAGCAGGCTTCATACATAACTGGTGGAATATATTACAAGCCTCCCCAATTGGACGGGCTTTATCAATATCTTTCAACAGTGTTTGCAACTGATTTGCATTCTCGTGCATTTTTACGGCTTCCTAAATCTGTGGGTGTGGATTTTCGTGCCTCGTGTTTCTGCCATAAACAAACAATTGACATGGGCTATGTGTGTTCTGTATGCTTATCCATATTCTGTGAGCACCATGATAAGTGTTCAACCTGTGGGGGTTAG

>Glyma.04g250400.6 sequence-type=CDS polypeptide=Glyma.04g250400.6.p locus=Glyma.04g250400 id=Glyma.04g250400.6.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGCCCGCGCTTTATTCCAATTTACTTCACAATCTCGACGAGTTTCTCGCTAGGGACCGGCAATTAGACGCCGACGCCTCTCACGCACCGGGAATCGTTCCTTCTTCGCTGTTATCGGGCTCCTTGTCCATGGCGCTTTGTTATATACAGAGAGCTTTTCGTTCGGGACCAATGCCTCCTCAGCCTCGGATTTTATGTTTGCAAGGGGCTGCTGATGGACCAGAACAGTATGTGGCAATCATGAATGCAATATTCTCTGCACAGCACTCTACAGTTCCTATAGATTCTTGTTATATTGGTTCAAACAATTCTGCATTCCTCCAGCAGGCTTCATACATAACTGGTGGAATATATTACAAGCCTCCCCAATTGGACGGGCTTTATCAATATCTTTCAACAGTGTTTGCAACTGATTTGCATTCTCGTGCATTTTTACGGCTTCCTAAATCTGTGGGTGTGGATTTTCGTGCCTCGTGTTTCTGCCATAAACAAACAATTGACATGGGCTATGTGTGTTCTGTATGCTTATCCATATTCTGTGAGCACCATGATAAGTGTTCAACCTGTGGGTCTGTATTTGGCCAGGCTCAACTAGATGCCTCAGCAGCCGACCGGCAAAGAAAGGCTTGA

>Glyma.04g250400.7 sequence-type=CDS polypeptide=Glyma.04g250400.7.p locus=Glyma.04g250400 id=Glyma.04g250400.7.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGCCCGCGCTTTATTCCAATTTACTTCACAATCTCGACGAGTTTCTCGCTAGGGACCGGCAATTAGACGCCGACGCCTCTCACGCACCGGGAATCGTTCCTTCTTCGCTGTTATCGGGCTCCTTGTCCATGGCGCTTTGTTATATACAGAGAGCTTTTCGTTCGGGACCAATGCCTCCTCAGCCTCGGATTTTATGTTTGCAAGGGGCTGCTGATGGACCAGAACAGTATGTGGCAATCATGAATGCAATATTCTCTGCACAGCACTCTACAGTTCCTATAGATTCTTGTTATATTGGTTCAAACAATTCTGCATTCCTCCAGCAGGCTTCATACATAACTGGTGGAATATATTACAAGCCTCCCCAATTGGACGGGCTTTATCAATATCTTTCAACAGTGTTTGCAACTGATTTGCATTCTCGTGCATTTTTACGGCTTCCTAAATCTGTGGGTGTGGATTTTCGTGCCTCGTGTTTCTGCCATAAACAAACAATTGACATGGGCTATGTGTGTTCTGTATGCTTATCCATATTCTGTGAGCACCATGATAAGTGTTCAACCTGTGGGGGTTAG
Predicted protein sequences of Glyma.04g250400
>Glyma.04g250400.1.p sequence-type=predicted peptide transcript=Glyma.04g250400.1 locus=Glyma.04g250400 id=Glyma.04g250400.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MPSAPSKLYADDVSLLVVTLDTNPFFWSTFPFPFAEFLSQVLAFLNTILLLGQLNQVIVIATGCNSCGYVYDSTSDKNHGSTTGTMPALYSNLLHNLDEFLARDRQLDADASHAPGIVPSSLLSGSLSMALCYIQRAFRSGPMPPQPRILCLQGAADGPEQYVAIMNAIFSAQHSTVPIDSCYIGSNNSAFLQQASYITGGIYYKPPQLDGLYQYLSTVFATDLHSRAFLRLPKSVGVDFRASCFCHKQTIDMGYVCSVCLSIFCEHHDKCSTCGSVFGQAQLDASAADRQRKA*

>Glyma.04g250400.2.p sequence-type=predicted peptide transcript=Glyma.04g250400.2 locus=Glyma.04g250400 id=Glyma.04g250400.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MPSAPSKLYADDVSLLVVTLDTNPFFWSTFPFPFAEFLSQVLAFLNTILLLGQLNQVIVIATGCNSCGYVYDSTSDKNHGSTTGTMPALYSNLLHNLDEFLARDRQLDADASHAPGIVPSSLLSGSLSMALCYIQRAFRSGPMPPQPRILCLQGAADGPEQYVAIMNAIFSAQHSTVPIDSCYIGSNNSAFLQQASYITGGIYYKPPQLDGLYQYLSTVFATDLHSRAFLRLPKSVGVDFRASCFCHKQTIDMGYVCSVCLSIFCEHHDKCSTCGG*

>Glyma.04g250400.5.p sequence-type=predicted peptide transcript=Glyma.04g250400.5 locus=Glyma.04g250400 id=Glyma.04g250400.5.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MPSAPSKLYADDVSLLVVTLDTNPFFWSTFPFPFAEFLSQVLAFLNTILLLGQLNQVIVIATGCNSCGYVYDSTSDKNHGSTTGTMPALYSNLLHNLDEFLARDRQLDADASHAPGIVPSSLLSGSLSMALCYIQRAFRSGPMPPQPRILCLQGAADGPEQYVAIMNAIFSAQHSTVPIDSCYIGSNNSAFLQQASYITGGIYYKPPQLDGLYQYLSTVFATDLHSRAFLRLPKSVGVDFRASCFCHKQTIDMGYVCSVCLSIFCEHHDKCSTCGG*

>Glyma.04g250400.6.p sequence-type=predicted peptide transcript=Glyma.04g250400.6 locus=Glyma.04g250400 id=Glyma.04g250400.6.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MPALYSNLLHNLDEFLARDRQLDADASHAPGIVPSSLLSGSLSMALCYIQRAFRSGPMPPQPRILCLQGAADGPEQYVAIMNAIFSAQHSTVPIDSCYIGSNNSAFLQQASYITGGIYYKPPQLDGLYQYLSTVFATDLHSRAFLRLPKSVGVDFRASCFCHKQTIDMGYVCSVCLSIFCEHHDKCSTCGSVFGQAQLDASAADRQRKA*

>Glyma.04g250400.7.p sequence-type=predicted peptide transcript=Glyma.04g250400.7 locus=Glyma.04g250400 id=Glyma.04g250400.7.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MPALYSNLLHNLDEFLARDRQLDADASHAPGIVPSSLLSGSLSMALCYIQRAFRSGPMPPQPRILCLQGAADGPEQYVAIMNAIFSAQHSTVPIDSCYIGSNNSAFLQQASYITGGIYYKPPQLDGLYQYLSTVFATDLHSRAFLRLPKSVGVDFRASCFCHKQTIDMGYVCSVCLSIFCEHHDKCSTCGG*






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