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A previous version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT1G21750.1 | AT | PDI-like 1-1 | JGI | N/A | IEA |
AT1G77510.1 | AT | PDI-like 1-2 | JGI | N/A | IEA |
GO:0006457 | GO-bp | protein folding | EnsemblGenomes | N/A | IEA |
GO:0034976 | GO-bp | response to endoplasmic reticulum stress | EnsemblGenomes | N/A | IEA |
GO:0045454 | GO-bp | cell redox homeostasis | EnsemblGenomes | N/A | IEA |
GO:0045454 | GO-bp | cell redox homeostasis | JGI | N/A | IEA |
GO:0005623 | GO-cc | cell | EnsemblGenomes | N/A | IEA |
GO:0005783 | GO-cc | endoplasmic reticulum | EnsemblGenomes | N/A | IEA |
GO:0016020 | GO-cc | membrane | EnsemblGenomes | N/A | IEA |
GO:0016021 | GO-cc | integral component of membrane | EnsemblGenomes | N/A | IEA |
GO:0003756 | GO-mf | protein disulfide isomerase activity | EnsemblGenomes | N/A | IEA |
GO:0016853 | GO-mf | isomerase activity | EnsemblGenomes | N/A | IEA |
KOG0190 | KOG | Protein disulfide isomerase (prolyl 4-hydroxylase beta subunit) | JGI | N/A | IEA |
PTHR18929 | Panther | PROTEIN DISULFIDE ISOMERASE | JGI | N/A | IEA |
PTHR18929:SF32 | Panther | JGI | N/A | IEA | |
PF00085 | PFAM | Thioredoxin | JGI | N/A | IEA |
Glyma.04g247900 not represented in the dataset |
Glyma.04g247900 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.
Gene information in GlycineMine developed by LIS.
Gene families from PhyloGenes.
Paralog | Evidence | Comments |
---|---|---|
Glyma.06g114800 | IGC | Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35. |
Corresponding Name | Annotation Version | Evidence | Comments |
---|---|---|---|
Glyma04g42690 | Wm82.a1.v1.1 | IGC | As supplied by JGI |
>Glyma.04g247900.2 sequence-type=transcript locus=Glyma.04g247900 ID=Glyma.04g247900.2.Wm82.a2.v1 annot-version=Wm82.a2.v1 GCACGTGTCATACGTTATGCATTTCGGGTTCTGTTTCTCCTCCTTCAAAACCCCCTCCTCGTGACTGTCTACGATGCCCAAATTTTTTCATAGCATTTTCAGAGGAACAATGGCGGGTAGGGTTTCGACGTGCTTCTTCTTCGTGTTTGCTCTTTCTCTCCTTCTTCCTTTTCAGATCTCCGCTGAGGAATCATCGGAGAAAGAGTTCGTACTCACATTGGATCACTCTAACTTTCACGACACTGTCAGCAAGCACGATTTCATCGTCGTCGAGTTCTACGCTCCATGGTGTGGCCACTGTAAGAAGCTTGCTCCCGAGTATGAGAAAGCTGCTTCTATCTTGAGTAGTCATGATCCTCCGGTTGTTTTGGCTAAAATTGATGCCAATGAGGAGAAGAACAAAGACCTTGCATCTCAATATGATGTTAGGGGATACCCAACAATTAAGATTCTGAGAAATGGGGGAAAGAATGTTCAGGAATACAAAGGTCCCCGTGAAGCAGATGGCATCGTTGACTATTTGAAGAAACAAAGTGGTCCTGCTTCAACTGAAATTAAATCTGCTGATGAAGCTACTGCTTTCATTGGTGAAAATAAAGTTGCTATTGTTGGAGTTTTCCCGAAATTTTCTGGAGAGGAGTTTGACAACTTTTCTGCCTTAGCAGAGAAGTTGCGTTCTGACTATGACTTCGGTCACACTCTGAATGCCAAACACCTTCCAAGAGGAGAGTCATCAGTTTCTGGTCCCGTAGTTAGGTTGTTCAAGCCATTCGATGAACTTTTTGTTGACTTCCAGGATTTCAATGTGGAAGCTCTAGAGAAATTTGTTGAGGAATCTAGTACCCCTGTTGTTACTGTCTTTAACAATGATCCGAGCAATCACCCTTTCGTTGCCAAATTCTTCAACAGTCCCAATGCAAAGGCAATGTTGTTCATCAACTTCACTGCCGAAGGTGCTGAATCTTTCAAATCAAAATACCGTGAAGCTGCTGAGCAACATAAACAACAGGGTGTAAGCTTTTTGGTGGGAGATGTTGAGTCTAGTCAAGGTGCTTTCCAGTATTTTGGACTGAAAGAAGAACAAGTACCTCTAATTATCATTCAACACAATGACGGGAAAAAGTTTTTTAAACCCAATTTGGAAGCTGATCACATTCCAACTTGGTTGAAGGCGTACAAGGATGGTAATGTTGCACCATTTGTGAAGTCTGAACCCATTCCTGAAGCTAACGATGAACCTGTTAAAGTGGTAGTTGGGAACAGTCTTGAGGACATTGTTTTCAAATCTGGGAAGAATGGTATGTACTTTACTTCTTTTTTTATTTGGTTTTATTCCATGGATATCAGATAGATTTTGGCATTCACTGTGCTCTAACAAAAAATATCACATTATTGGTTGCAAACTATATGAAGGAACAAACGTGTTTTTAATGAAAAGTTATGTGATATCCTTCTGATACTCTGTTATGTATCTGTGATTATATCCTTCAGACATCATTTGTGTTAATTAGTGATTTGCCTTTATCATTCCACTATTATAACTGCTAACCCAAACACCTTACAGTTCTGCTGGAGTTTTATGCTCCCTGGTGTGGTCATTGCAAACAGTTGGCTCCAATATTGGACGAAGTTGCTATCTCATATCAAAGTGATGCTGATGTTGTTATTGCAAAACTGGATGCAACTGCCAACGATATCCCAAGTGAAACCTTTGATGTCCAAGGTTATCCAACCGTGTACTTCAGGTCAGCAAGTGGAAAGTTATCACAATACGAAGGGGGTAGGACCAAGGAAGACATCATAGAATTCATCGAAAAGAACCGGGACAAACCTGCTCAGcaagaacaaggacaagataaacctgctcagcaagaacaaggacaagatgagcaagaaaaaggaaaagaTGAGCTTTGAAAGGGAGCTGTTCCTCACATGGGATATAGACACAAAGTTACATGTGGGCTGCACACCCTTTTGTATCTCGTTATCAGAATTTAGTGAACCTTAGGTGCTACCTATCttcctttgatcttcttttcttttcggttttcttttATGTATGGTTTACTTAATAAAAACGGGAGCTTTTGCTTGGTGTAGTAGAGTTTAGTGCAGGGAAAGGTGTAGCTGGGATCCGAGTTAAATTAATGGATGTTTTTAGATCACCCAGTATCTCTAGTCTCTAGATATCTTAATAGTAATTTTAAGTTTCATATCGTGACGTATGTTATGATATAAAATTTTCAGTTAAGCGTGTTTTGCAAACCCTGTTAGTAGTTGCTCTGTATTTCTCCGTGTTTGGCCTTATACAGTTATACACATGCTCTACCT >Glyma.04g247900.3 sequence-type=transcript locus=Glyma.04g247900 ID=Glyma.04g247900.3.Wm82.a2.v1 annot-version=Wm82.a2.v1 GCACGTGTCATACGTTATGCATTTCGGGTTCTGTTTCTCCTCCTTCAAAACCCCCTCCTCGTGACTGTCTACGATGCCCAAATTTTTTCATAGCATTTTCAGAGGAACAATGGCGGGTAGGGTTTCGACGTGCTTCTTCTTCGTGTTTGCTCTTTCTCTCCTTCTTCCTTTTCAGATCTCCGCTGAGGAATCATCGGAGAAAGAGTTCGTACTCACATTGGATCACTCTAACTTTCACGACACTGTCAGCAAGCACGATTTCATCGTCGTCGAGTTCTACGCTCCATGGTGTGGCCACTGTAAGAAGCTTGCTCCCGAGTATGAGAAAGCTGCTTCTATCTTGAGTAGTCATGATCCTCCGGTTGTTTTGGCTAAAATTGATGCCAATGAGGAGAAGAACAAAGACCTTGCATCTCAATATGATGTTAGGGGATACCCAACAATTAAGATTCTGAGAAATGGGGGAAAGAATGTTCAGGAATACAAAGGTCCCCGTGAAGCAGATGGCATCGTTGACTATTTGAAGAAACAAAGTGGTCCTGCTTCAACTGAAATTAAATCTGCTGATGAAGCTACTGCTTTCATTGGTGAAAATAAAGTTGCTATTGTTGGAGTTTTCCCGAAATTTTCTGGAGAGGAGTTTGACAACTTTTCTGCCTTAGCAGAGAAGTTGCGTTCTGACTATGACTTCGGTCACACTCTGAATGCCAAACACCTTCCAAGAGGAGAGTCATCAGTTTCTGGTCCCGTAGTTAGGTTGTTCAAGCCATTCGATGAACTTTTTGTTGACTTCCAGGATTTCAATGTGGAAGCTCTAGAGAAATTTGTTGAGGAATCTAGTACCCCTGTTGTTACTGTCTTTAACAATGATCCGAGCAATCACCCTTTCGTTGCCAAATTCTTCAACAGTCCCAATGCAAAGGCAATGTTGTTCATCAACTTCACTGCCGAAGGTGCTGAATCTTTCAAATCAAAATACCGTGAAGCTGCTGAGCAACATAAACAACAGGGTGTAAGCTTTTTGGTGGGAGATGTTGAGTCTAGTCAAGGTGCTTTCCAGTATTTTGGACTGAAAGAAGAACAAGTACCTCTAATTATCATTCAACACAATGACGGGAAAAAGTTTTTTAAACCCAATTTGGAAGCTGATCACATTCCAACTTGGTTGAAGGCGTACAAGGTTATTCTTATTTCTTTTAGTAGCATATTGCTTTCGCCTAATTTAATCTGGCATCTTATTTTAGTGATTGGGATATATCAGTTTAGTGAACTCTTTAATTTTGTGTTGTCTAATTGTGACTATTATTTGTCTTGAAAATTATAAATTTTAACATTTTCTTTCTGAATATTTCAGGATGGTAATGTTGCACCATTTGTGAAGTCTGAACCCATTCCTGAAGCTAACGATGAACCTGTTAAAGTGGTAGTTGGGAACAGTCTTGAGGACATTGTTTTCAAATCTGGGAAGAATGGTATGTACTTTACTTCTTTTTTTATTTGGTTTTATTCC
>Glyma.04g247900.1 sequence-type=CDS polypeptide=Glyma.04g247900.1.p locus=Glyma.04g247900 ID=Glyma.04g247900.1.Wm82.a2.v1 annot-version=Wm82.a2.v1 ATGCCCAAATTTTTTCATAGCATTTTCAGAGGAACAATGGCGGGTAGGGTTTCGACGTGCTTCTTCTTCGTGTTTGCTCTTTCTCTCCTTCTTCCTTTTCAGATCTCCGCTGAGGAATCATCGGAGAAAGAGTTCGTACTCACATTGGATCACTCTAACTTTCACGACACTGTCAGCAAGCACGATTTCATCGTCGTCGAGTTCTACGCTCCATGGTGTGGCCACTGTAAGAAGCTTGCTCCCGAGTATGAGAAAGCTGCTTCTATCTTGAGTAGTCATGATCCTCCGGTTGTTTTGGCTAAAATTGATGCCAATGAGGAGAAGAACAAAGACCTTGCATCTCAATATGATGTTAGGGGATACCCAACAATTAAGATTCTGAGAAATGGGGGAAAGAATGTTCAGGAATACAAAGGTCCCCGTGAAGCAGATGGCATCGTTGACTATTTGAAGAAACAAAGTGGTCCTGCTTCAACTGAAATTAAATCTGCTGATGAAGCTACTGCTTTCATTGGTGAAAATAAAGTTGCTATTGTTGGAGTTTTCCCGAAATTTTCTGGAGAGGAGTTTGACAACTTTTCTGCCTTAGCAGAGAAGTTGCGTTCTGACTATGACTTCGGTCACACTCTGAATGCCAAACACCTTCCAAGAGGAGAGTCATCAGTTTCTGGTCCCGTAGTTAGGTTGTTCAAGCCATTCGATGAACTTTTTGTTGACTTCCAGGATTTCAATGTGGAAGCTCTAGAGAAATTTGTTGAGGAATCTAGTACCCCTGTTGTTACTGTCTTTAACAATGATCCGAGCAATCACCCTTTCGTTGCCAAATTCTTCAACAGTCCCAATGCAAAGGCAATGTTGTTCATCAACTTCACTGCCGAAGGTGCTGAATCTTTCAAATCAAAATACCGTGAAGCTGCTGAGCAACATAAACAACAGGGTGTAAGCTTTTTGGTGGGAGATGTTGAGTCTAGTCAAGGTGCTTTCCAGTATTTTGGACTGAAAGAAGAACAAGTACCTCTAATTATCATTCAACACAATGACGGGAAAAAGTTTTTTAAACCCAATTTGGAAGCTGATCACATTCCAACTTGGTTGAAGGCGTACAAGGATGGTAATGTTGCACCATTTGTGAAGTCTGAACCCATTCCTGAAGCTAACGATGAACCTGTTAAAGTGGTAGTTGGGAACAGTCTTGAGGACATTGTTTTCAAATCTGGGAAGAATGTTCTGCTGGAGTTTTATGCTCCCTGGTGTGGTCATTGCAAACAGTTGGCTCCAATATTGGACGAAGTTGCTATCTCATATCAAAGTGATGCTGATGTTGTTATTGCAAAACTGGATGCAACTGCCAACGATATCCCAAGTGAAACCTTTGATGTCCAAGGTTATCCAACCGTGTACTTCAGGTCAGCAAGTGGAAAGTTATCACAATACGAAGGGGGTAGGACCAAGGAAGACATCATAGAATTCATCGAAAAGAACCGGGACAAACCTGCTCAGCAAGAACAAGGACAAGATAAACCTGCTCAGCAAGAACAAGGACAAGATGAGCAAGAAAAAGGAAAAGATGAGCTTTGA >Glyma.04g247900.2 sequence-type=CDS polypeptide=Glyma.04g247900.2.p locus=Glyma.04g247900 ID=Glyma.04g247900.2.Wm82.a2.v1 annot-version=Wm82.a2.v1 ATGCCCAAATTTTTTCATAGCATTTTCAGAGGAACAATGGCGGGTAGGGTTTCGACGTGCTTCTTCTTCGTGTTTGCTCTTTCTCTCCTTCTTCCTTTTCAGATCTCCGCTGAGGAATCATCGGAGAAAGAGTTCGTACTCACATTGGATCACTCTAACTTTCACGACACTGTCAGCAAGCACGATTTCATCGTCGTCGAGTTCTACGCTCCATGGTGTGGCCACTGTAAGAAGCTTGCTCCCGAGTATGAGAAAGCTGCTTCTATCTTGAGTAGTCATGATCCTCCGGTTGTTTTGGCTAAAATTGATGCCAATGAGGAGAAGAACAAAGACCTTGCATCTCAATATGATGTTAGGGGATACCCAACAATTAAGATTCTGAGAAATGGGGGAAAGAATGTTCAGGAATACAAAGGTCCCCGTGAAGCAGATGGCATCGTTGACTATTTGAAGAAACAAAGTGGTCCTGCTTCAACTGAAATTAAATCTGCTGATGAAGCTACTGCTTTCATTGGTGAAAATAAAGTTGCTATTGTTGGAGTTTTCCCGAAATTTTCTGGAGAGGAGTTTGACAACTTTTCTGCCTTAGCAGAGAAGTTGCGTTCTGACTATGACTTCGGTCACACTCTGAATGCCAAACACCTTCCAAGAGGAGAGTCATCAGTTTCTGGTCCCGTAGTTAGGTTGTTCAAGCCATTCGATGAACTTTTTGTTGACTTCCAGGATTTCAATGTGGAAGCTCTAGAGAAATTTGTTGAGGAATCTAGTACCCCTGTTGTTACTGTCTTTAACAATGATCCGAGCAATCACCCTTTCGTTGCCAAATTCTTCAACAGTCCCAATGCAAAGGCAATGTTGTTCATCAACTTCACTGCCGAAGGTGCTGAATCTTTCAAATCAAAATACCGTGAAGCTGCTGAGCAACATAAACAACAGGGTGTAAGCTTTTTGGTGGGAGATGTTGAGTCTAGTCAAGGTGCTTTCCAGTATTTTGGACTGAAAGAAGAACAAGTACCTCTAATTATCATTCAACACAATGACGGGAAAAAGTTTTTTAAACCCAATTTGGAAGCTGATCACATTCCAACTTGGTTGAAGGCGTACAAGGATGGTAATGTTGCACCATTTGTGAAGTCTGAACCCATTCCTGAAGCTAACGATGAACCTGTTAAAGTGGTAGTTGGGAACAGTCTTGAGGACATTGTTTTCAAATCTGGGAAGAATGGTATGTACTTTACTTCTTTTTTTATTTGGTTTTATTCCATGGATATCAGATAG >Glyma.04g247900.3 sequence-type=CDS polypeptide=Glyma.04g247900.3.p locus=Glyma.04g247900 ID=Glyma.04g247900.3.Wm82.a2.v1 annot-version=Wm82.a2.v1 ATGCCCAAATTTTTTCATAGCATTTTCAGAGGAACAATGGCGGGTAGGGTTTCGACGTGCTTCTTCTTCGTGTTTGCTCTTTCTCTCCTTCTTCCTTTTCAGATCTCCGCTGAGGAATCATCGGAGAAAGAGTTCGTACTCACATTGGATCACTCTAACTTTCACGACACTGTCAGCAAGCACGATTTCATCGTCGTCGAGTTCTACGCTCCATGGTGTGGCCACTGTAAGAAGCTTGCTCCCGAGTATGAGAAAGCTGCTTCTATCTTGAGTAGTCATGATCCTCCGGTTGTTTTGGCTAAAATTGATGCCAATGAGGAGAAGAACAAAGACCTTGCATCTCAATATGATGTTAGGGGATACCCAACAATTAAGATTCTGAGAAATGGGGGAAAGAATGTTCAGGAATACAAAGGTCCCCGTGAAGCAGATGGCATCGTTGACTATTTGAAGAAACAAAGTGGTCCTGCTTCAACTGAAATTAAATCTGCTGATGAAGCTACTGCTTTCATTGGTGAAAATAAAGTTGCTATTGTTGGAGTTTTCCCGAAATTTTCTGGAGAGGAGTTTGACAACTTTTCTGCCTTAGCAGAGAAGTTGCGTTCTGACTATGACTTCGGTCACACTCTGAATGCCAAACACCTTCCAAGAGGAGAGTCATCAGTTTCTGGTCCCGTAGTTAGGTTGTTCAAGCCATTCGATGAACTTTTTGTTGACTTCCAGGATTTCAATGTGGAAGCTCTAGAGAAATTTGTTGAGGAATCTAGTACCCCTGTTGTTACTGTCTTTAACAATGATCCGAGCAATCACCCTTTCGTTGCCAAATTCTTCAACAGTCCCAATGCAAAGGCAATGTTGTTCATCAACTTCACTGCCGAAGGTGCTGAATCTTTCAAATCAAAATACCGTGAAGCTGCTGAGCAACATAAACAACAGGGTGTAAGCTTTTTGGTGGGAGATGTTGAGTCTAGTCAAGGTGCTTTCCAGTATTTTGGACTGAAAGAAGAACAAGTACCTCTAATTATCATTCAACACAATGACGGGAAAAAGTTTTTTAAACCCAATTTGGAAGCTGATCACATTCCAACTTGGTTGAAGGCGTACAAGGTTATTCTTATTTCTTTTAGTAGCATATTGCTTTCGCCTAATTTAATCTGGCATCTTATTTTAGTGATTGGGATATATCAGTTTAGTGAACTCTTTAATTTTGTGTTGTCTAATTGTGACTATTATTTGTCTTGA
>Glyma.04g247900.1.p sequence-type=predicted peptide transcript=Glyma.04g247900.1 locus=Glyma.04g247900 ID=Glyma.04g247900.1.Wm82.a2.v1 annot-version=Wm82.a2.v1 MPKFFHSIFRGTMAGRVSTCFFFVFALSLLLPFQISAEESSEKEFVLTLDHSNFHDTVSKHDFIVVEFYAPWCGHCKKLAPEYEKAASILSSHDPPVVLAKIDANEEKNKDLASQYDVRGYPTIKILRNGGKNVQEYKGPREADGIVDYLKKQSGPASTEIKSADEATAFIGENKVAIVGVFPKFSGEEFDNFSALAEKLRSDYDFGHTLNAKHLPRGESSVSGPVVRLFKPFDELFVDFQDFNVEALEKFVEESSTPVVTVFNNDPSNHPFVAKFFNSPNAKAMLFINFTAEGAESFKSKYREAAEQHKQQGVSFLVGDVESSQGAFQYFGLKEEQVPLIIIQHNDGKKFFKPNLEADHIPTWLKAYKDGNVAPFVKSEPIPEANDEPVKVVVGNSLEDIVFKSGKNVLLEFYAPWCGHCKQLAPILDEVAISYQSDADVVIAKLDATANDIPSETFDVQGYPTVYFRSASGKLSQYEGGRTKEDIIEFIEKNRDKPAQQEQGQDKPAQQEQGQDEQEKGKDEL* >Glyma.04g247900.2.p sequence-type=predicted peptide transcript=Glyma.04g247900.2 locus=Glyma.04g247900 ID=Glyma.04g247900.2.Wm82.a2.v1 annot-version=Wm82.a2.v1 MPKFFHSIFRGTMAGRVSTCFFFVFALSLLLPFQISAEESSEKEFVLTLDHSNFHDTVSKHDFIVVEFYAPWCGHCKKLAPEYEKAASILSSHDPPVVLAKIDANEEKNKDLASQYDVRGYPTIKILRNGGKNVQEYKGPREADGIVDYLKKQSGPASTEIKSADEATAFIGENKVAIVGVFPKFSGEEFDNFSALAEKLRSDYDFGHTLNAKHLPRGESSVSGPVVRLFKPFDELFVDFQDFNVEALEKFVEESSTPVVTVFNNDPSNHPFVAKFFNSPNAKAMLFINFTAEGAESFKSKYREAAEQHKQQGVSFLVGDVESSQGAFQYFGLKEEQVPLIIIQHNDGKKFFKPNLEADHIPTWLKAYKDGNVAPFVKSEPIPEANDEPVKVVVGNSLEDIVFKSGKNGMYFTSFFIWFYSMDIR* >Glyma.04g247900.3.p sequence-type=predicted peptide transcript=Glyma.04g247900.3 locus=Glyma.04g247900 ID=Glyma.04g247900.3.Wm82.a2.v1 annot-version=Wm82.a2.v1 MPKFFHSIFRGTMAGRVSTCFFFVFALSLLLPFQISAEESSEKEFVLTLDHSNFHDTVSKHDFIVVEFYAPWCGHCKKLAPEYEKAASILSSHDPPVVLAKIDANEEKNKDLASQYDVRGYPTIKILRNGGKNVQEYKGPREADGIVDYLKKQSGPASTEIKSADEATAFIGENKVAIVGVFPKFSGEEFDNFSALAEKLRSDYDFGHTLNAKHLPRGESSVSGPVVRLFKPFDELFVDFQDFNVEALEKFVEESSTPVVTVFNNDPSNHPFVAKFFNSPNAKAMLFINFTAEGAESFKSKYREAAEQHKQQGVSFLVGDVESSQGAFQYFGLKEEQVPLIIIQHNDGKKFFKPNLEADHIPTWLKAYKVILISFSSILLSPNLIWHLILVIGIYQFSELFNFVLSNCDYYLS*
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