SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.04g246800

Feature Type:gene_model
Chromosome:Gm04
Start:50233640
stop:50240098
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.04g246800
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G21690.1AT EMB1968,RFC4 JGI N/AIEA
GO:0005524GO-mf ATP binding JGI N/AIEA
K10755KEGG DNA repair and recombination proteins JGI N/AIEA
KOG0989 KOG Replication factor C, subunit RFC4 JGI N/AIEA
PTHR11669PantherFam REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT JGI N/AIEA
PF00004Pfam ATPase family associated with various cellular activities (AAA) JGI N/AIEA
PF08542Pfam Replication factor C C-terminal domain JGI N/AIEA

Gene model name correspondences to Glyma.04g246800 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma04g42550 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.04g246800
>Glyma.04g246800.4 sequence-type=CDS polypeptide=Glyma.04g246800.4.p locus=Glyma.04g246800 id=Glyma.04g246800.4.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGATCTAGCATTAGCATGCTCGATCTTCTTATATTATGATATGCATCCTCCTAGTAGCTATTTATGTTGCTATTTTTATGCATCATTGCTGATATGTTACTGCCTTGATATATGCTGTTTTAAACTTTTATTTCTTTTTTTAGTAGTGTGTGAGAATAGATGGCGCCAATCCTGCAGAGCACTCAGCCATGGCCGGCCAAAGCAAGTGAAAGATGTTGCCCACCAAGATGAAGTTGTTCGAGTACTGACAAACACCCTTGAAACTGGAAGTTGTCCCCACATGCTCTTCTATGGTCCTCCCGGCACAGGAAAAACAACGACTGCCCTTGCAATTGCCCATCAGCTTTTTGGACCTGAGCTCTATAAGTCTAGGGTGCTGGAGCTGAATGCAAGTGATGATAGAGGGATTAATGTTGTTCGAACAAAGATAAAAGATTTTGCTGCTGTTGCTGTTGGTACTAATCAGCGTAAAAGTGGTTATCCTTGTCCACCATTTAAGATTATTGTTCTAGACGAGGCAGATTCAATGACTGAAGATGCTCAGAATGCCCTGAGGCGTACAATGGAAACTTACTCTAAAGTTACAAGGTTCTTTTTTATATGCAACTATGTTAGCAGGATTATAGAACCACTTGCTTCAAGGTGTGCAAAATTCAGGTTCAAACCATTATCAGAAGAAATCATGAGCAGCCGGATATTATACATCTCCCAAGAAGAGGGACTCTGTCTTGATGCTGAGGCTCTTTCAACCCTGAGTTCTATTTCTCATGGAGATCTTCGTCGGGCAATCACATACTTGCAGTCTGCAGCTCGCTTATTTGGATCTTCAATTTCTTCAGAGAATCTGATTTCTGTGTCTGGGGTTGTTCCGGCAAAGGTTGTGGAGGAACTTCTTAAAGCTTGCAAAAGTGGTAATTTTGATTTGGCAAACAAGGAAGTCAACAATTTCATTGCAGAGGGATATCCAGCTTCTCAGATGCTTACTCAGTTATTTGAGTCCATTGTTGAAGACAATGACTTATCTGATGAGCAAAAAGCAAGAATATCCAAGAAGCTGGGTGAAGCTGATAAGTGCTTAGTTGACGGTGCTGATGAATACTTACAACTTCTTGATGTGGTCAGCAATACAATGAAAGCTTTTAGCAACATGCCAGAAACATTTGCTTACAAATGTTAG
Predicted protein sequences of Glyma.04g246800
>Glyma.04g246800.4.p sequence-type=predicted peptide transcript=Glyma.04g246800.4 locus=Glyma.04g246800 id=Glyma.04g246800.4.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MDLALACSIFLYYDMHPPSSYLCCYFYASLLICYCLDICCFKLLFLFLVVCENRWRQSCRALSHGRPKQVKDVAHQDEVVRVLTNTLETGSCPHMLFYGPPGTGKTTTALAIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGTNQRKSGYPCPPFKIIVLDEADSMTEDAQNALRRTMETYSKVTRFFFICNYVSRIIEPLASRCAKFRFKPLSEEIMSSRILYISQEEGLCLDAEALSTLSSISHGDLRRAITYLQSAARLFGSSISSENLISVSGVVPAKVVEELLKACKSGNFDLANKEVNNFIAEGYPASQMLTQLFESIVEDNDLSDEQKARISKKLGEADKCLVDGADEYLQLLDVVSNTMKAFSNMPETFAYKC*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo