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Report for Sequence Feature Glyma.04g238000

Feature Type:gene_model
Chromosome:Gm04
Start:49463460
stop:49468826
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.04g238000
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G53180.1AT ATPTB2,PTB2 JGI N/AIEA
GO:0003676GO-mf nucleic acid binding JGI N/AIEA
K14948KEGG Spliceosome JGI N/AIEA
KOG1190 KOG Polypyrimidine tract-binding protein JGI N/AIEA
PTHR24012PantherFam RNA BINDING PROTEIN JGI N/AIEA
PF00076Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) JGI N/AIEA
PF13893Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) JGI N/AIEA

Gene model name correspondences to Glyma.04g238000 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments


Coding sequences of Glyma.04g238000
>Glyma.04g238000.2 sequence-type=CDS polypeptide=Glyma.04g238000.2.p locus=Glyma.04g238000 id=Glyma.04g238000.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCATCGGTATCTAGTCAGCCACAGTTCCGTTACACTCAGCCGCCGTCAAAGGTGCTTCATTTGAGGAACTTGCCGTGGGAGTGCACAGAGGAGGAACTGATTGAGCTTGGGAAGCCGTTTGGCAAAGTTGTTAACACAAAATGCAATGTTGGGGCAAATAGAAATCAAGCTTTTATTGAATTTGCAGATTTGAATCAAGCCATTGCAATGATATCATACTATGCCTCATCATCAGAGCCTGCTCAAGTACGAGGGAAAACTGTATACCTACAATATTCAAATAGGCAAGAAATAGTGAATAACAAAACTGCTGCAGATGTTCCTGGGAATGTATTGTTGGTAACGATTGAGGGTGCAGATGCACGTCTTGTCAGCATTGATGTCTTGCACTTGGTTTTTTCAGCCTTTGGATTTGTGCATAAGATTACTACTTTCGAGAAGACAGCAGGATTTCAGGCACTGGTGCAATTCTCAGATGCAGAGACTGCCACCTCTGCGAAGGATGCTTTGGATGGAAGAAGCATACCTAGGTATCTGCTGCCTGAGCATATGGGACCATGTACCCTTAGGATCACTTATTCTGGACATTCAGATTTAAGTGTAAAGTTTCAAAGCCACAGGAGCAGAGACTATACTAATCCTTACCTTCCTGTTGCTCCATCAGCTGTGGAGGGAAGTGGACAGGCTATGGTTGGCTTGGATGGGAAAAGACTGGAGGCTGAGAGTAATGTTCTCCTTGCATCTATTGAAAACATGCAATATGCCGTAACACTGGATGTCTTACACATGGTTTTCTCTGCTTTTGGTCCTGTCCAAAAAATTGCAATGTTCGATAAGAATGGTGGTTTGCAGGCTCTGATTCAATTTCCAGATACTCAGACAGCTGTTGTGGCCAAGGAGGCCTTGGAAGGACATTGCATATATGATGGAGGTTTTTGCAAGCTTCACATTTCATATTCACGACATACTGATCTAAGTATAAAGGTCAATAATGATAGGAGCAGAGACTATACCATTCCTAATACCCCTGCTGTGAACGTCCAACCCTCAATTTTAGGGCAACAATCTGTTCCCATGATGGGCCCTCCACAACAACCATACAATGGGTCTCAGGCTGGATGGGGGACAGCTCCACCAGCAACAACGGTTCAGTCTATGCCAATGCAGATGCACAATAATGTTTACATGCCATCTGGAACTATGCCACAACAAATGGCCCCTGGAATGCAATTTCCAAGTTACAACACAGCACAACCTACAACAACATTGCCCTCATATCGATCTGATCGTACTCAATAG
Predicted protein sequences of Glyma.04g238000
>Glyma.04g238000.2.p sequence-type=predicted peptide transcript=Glyma.04g238000.2 locus=Glyma.04g238000 id=Glyma.04g238000.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFIEFADLNQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTAADVPGNVLLVTIEGADARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETATSAKDALDGRSIPRYLLPEHMGPCTLRITYSGHSDLSVKFQSHRSRDYTNPYLPVAPSAVEGSGQAMVGLDGKRLEAESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQFPDTQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNTPAVNVQPSILGQQSVPMMGPPQQPYNGSQAGWGTAPPATTVQSMPMQMHNNVYMPSGTMPQQMAPGMQFPSYNTAQPTTTLPSYRSDRTQ*






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