SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.04g229300

Feature Type:gene_model
Chromosome:Gm04
Start:48639812
stop:48645126
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.04g229300
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G49430.2AT SRp34a JGI N/AIEA
GO:0003676GO-mf nucleic acid binding JGI N/AIEA
K12890KEGG Spliceosome JGI N/AIEA
KOG0105 KOG Alternative splicing factor ASF/SF2 (RRM superfamily) JGI N/AIEA
PTHR24012PantherFam RNA BINDING PROTEIN JGI N/AIEA
PF00076Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) JGI N/AIEA

Gene model name correspondences to Glyma.04g229300 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma04g40740 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.04g229300
>Glyma.04g229300.1 sequence-type=CDS polypeptide=Glyma.04g229300.1.p locus=Glyma.04g229300 id=Glyma.04g229300.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGAGCGGTCGCTTTTCTCGCACAATTTATGTCGGCAACCTGCCCTCTGATATAAGAGAGTCAGAAATTGAAGATCTATTCTACAAGTATGGCCGTATAATGGATATTGAATTGAAGGTTCCTCCCCGCCCTCCATGTTATTGCTTTGTTGAGTTTGATAATGCTCGAGATGCCGAAGATGCAATTCGGGGTCGAGATGGATACAACTTTGATGGTTGTCGGTTAAGAGTGGAGCTTGCTCATGGTGGTAGAGGGCCATCATCAAGTGATCGACGTGGATATGGAGGAGGAGGTGGTAATGGTGGAGCAGGCGGGGGTCGTTTTGGCATCTCACGCCATTCTGAATTTCGAGTTATTGTTCGTGGACTCCCATCTTCTGCATCTTGGCAAGATTTGAAGGATCATATGCGAAAAGCTGGGGACGTGTGTTTTGCTGAGGTTTCCCGTGATAGTGAAGGGACTTTTGGCATTGTTGATTACACTAATTATGATGACATGAAGTATGCCATTCGGAAATTGGATGACACTGAGTTTAGAAATCCCTGGGCGAGAGCTTATATTCGGGTGAGGAAGTATGAGAGTAGTCGTTCTAGGAGCCGCAGCAGGAGCCCCAGCAGGAGCCCCAGCAGGAGCAGAAGTCCAAAAAGAGTTAGAAGTAGATCTCTGGAGCGTTCTGTGTCTAGGTCACGATCTAGATCTCAATCAGCATCACCAATCAAATCTTCTAGGCCAAGATCACGATCCCGATCACGATCACGATCTGGATCTGGATCTCCTCATCAGGTCCTGTCAGGTAGTGGTTGA

>Glyma.04g229300.7 sequence-type=CDS polypeptide=Glyma.04g229300.7.p locus=Glyma.04g229300 id=Glyma.04g229300.7.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGAGCGGTCGCTTTTCTCGCACAATTTATGTCGGCAACCTGCCCTCTGATATAAGAGAGTCAGAAATTGAAGATCTATTCTACAAGTATGGCCGTATAATGGATATTGAATTGAAGGTTCCTCCCCGCCCTCCATGTTATTGCTTTGTTGAGTTTGATAATGCTCGAGATGCCGAAGATGCAATTCGGGGTCGAGATGGATACAACTTTGATGGTTGTCGGTTAAGAGTGGAGCTTGCTCATGGTGGTAGAGGGCCATCATCAAGTGATCGACGTGGATATGGAGGAGGAGGTGGTAATGGTGGAGCAGGCGGGGGTCGTTTTGGCATCTCACGCCATTCTGAATTTCGAGTTATTGTTCGTGGACTCCCATCTTCTGCATCTTGGCAAGATTTGAAGGATCATATGCGAAAAGCTGGGGACGTGTGTTTTGCTGAGGTTTCCCGTGATAGTGAAGGGACTTTTGGCATTGTTGATTACACTAATTATGATGACATGAAGTATGCCATTCGGAAATTGGATGACACTGAGTTTAGAAATCCCTGGGCGAGAGCTTATATTCGGGTGAGGAAGTATGAGAGTAGTCGTTCTAGGAGCCGCAGCAGGAGCCCCAGCAGGAGCCCCAGCAGGAGCAGAAGTCCAAAAAGAGTTAGAAGTAGATCTCTGGAGCGTTCTGTGTCTAGGTCACGATCTAGATCTCAATCAGCATCACCAATCAAATCTTCTAGGCCAAGATCACGATCCCGATCACGATCACGATCTGGATCTGGATCTCCTCATCAGGTCCTGTCAGGTAGTGGTTGA

>Glyma.04g229300.8 sequence-type=CDS polypeptide=Glyma.04g229300.8.p locus=Glyma.04g229300 id=Glyma.04g229300.8.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGAGCGGTCGCTTTTCTCGCACAATTTATGTCGGCAACCTGCCCTCTGATATAAGAGAGTCAGAAATTGAAGATCTATTCTACAAGTATGGCCGTATAATGGATATTGAATTGAAGGTTCCTCCCCGCCCTCCATGTTATTGCTTTGTTGAGTTTGATAATGCTCGAGATGCCGAAGATGCAATTCGGGGTCGAGATGGATACAACTTTGATGGTTGTCGGTTAAGAGTGGAGCTTGCTCATGGTGGTAGAGGGCCATCATCAAGTGATCGACGTGGATATGGAGGAGGAGGTGGTAATGGTGGAGCAGGCGGGGGTCGTTTTGGCATCTCACGCCATTCTGAATTTCGAGTTATTGTTCGTGGACTCCCATCTTCTGCATCTTGGCAAGATTTGAAGGATCATATGCGAAAAGCTGGGGACGTGTGTTTTGCTGAGGTTTCCCGTGATAGTGAAGGGACTTTTGGCATTGTTGATTACACTAATTATGATGACATGAAGTATGCCATTCGGAAATTGGATGACACTGAGTTTAGAAATCCCTGGGCGAGAGCTTATATTCGGGTGAGGAAGTATGAGAGTAGTCGTTCTAGGAGCCGCAGCAGGAGCCCCAGCAGGAGCCCCAGCAGGAGCAGAAGTCCAAAAAGAGTTAGAAGTAGATCTCTGGAGCGTTCTGTGTCTAGGTCACGATCTAGATCTCAATCAGCATCACCAATCAAATCTTCTAGGCCAAGATCACGATCCCGATCACGATCACGATCTGGATCTGGATCTCCTCATCAGGTCCTGTCAGGTAGTGGTTGA

>Glyma.04g229300.9 sequence-type=CDS polypeptide=Glyma.04g229300.9.p locus=Glyma.04g229300 id=Glyma.04g229300.9.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGAGCGGTCGCTTTTCTCGCACAATTTATGTCGGCAACCTGCCCTCTGATATAAGAGAGTCAGAAATTGAAGATCTATTCTACAAGTATGGCCGTATAATGGATATTGAATTGAAGGTTCCTCCCCGCCCTCCATGTTATTGCTTTGTTGAGTTTGATAATGCTCGAGATGCCGAAGATGCAATTCGGGGTCGAGATGGATACAACTTTGATGGTTGTCGGTTAAGAGTGGAGCTTGCTCATGGTGGTAGAGGGCCATCATCAAGTGATCGACGTGGATATGGAGGAGGAGGTGGTAATGGTGGAGCAGGCGGGGGTCGTTTTGGCATCTCACGCCATTCTGAATTTCGAGTTATTGTTCGTGGACTCCCATCTTCTGCATCTTGGCAAGATTTGAAGGATCATATGCGAAAAGCTGGGGACGTGTGTTTTGCTGAGGTTTCCCGTGATAGTGAAGGGACTTTTGGCATTGTTGATTACACTAATTATGATGACATGAAGTATGCCATTCGGAAATTGGATGACACTGAGTTTAGAAATCCCTGGGCGAGAGCTTATATTCGGGTGAGGAAGTATGAGAGTAGTCGTTCTAGGAGCCGCAGCAGGAGCCCCAGCAGGAGCCCCAGCAGGAGCAGAAGTCCAAAAAGAGTTAGAAGATCTCTGGAGCGTTCTGTGTCTAGGTCACGATCTAGATCTCAATCAGCATCACCAATCAAATCTTCTAGGCCAAGATCACGATCCCGATCACGATCACGATCTGGATCTGGATCTCCTCATCAGGTCCTGTCAGGTAGTGGTTGA
Predicted protein sequences of Glyma.04g229300
>Glyma.04g229300.1.p sequence-type=predicted peptide transcript=Glyma.04g229300.1 locus=Glyma.04g229300 id=Glyma.04g229300.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MSGRFSRTIYVGNLPSDIRESEIEDLFYKYGRIMDIELKVPPRPPCYCFVEFDNARDAEDAIRGRDGYNFDGCRLRVELAHGGRGPSSSDRRGYGGGGGNGGAGGGRFGISRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVRKYESSRSRSRSRSPSRSPSRSRSPKRVRSRSLERSVSRSRSRSQSASPIKSSRPRSRSRSRSRSGSGSPHQVLSGSG*

>Glyma.04g229300.7.p sequence-type=predicted peptide transcript=Glyma.04g229300.7 locus=Glyma.04g229300 id=Glyma.04g229300.7.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MSGRFSRTIYVGNLPSDIRESEIEDLFYKYGRIMDIELKVPPRPPCYCFVEFDNARDAEDAIRGRDGYNFDGCRLRVELAHGGRGPSSSDRRGYGGGGGNGGAGGGRFGISRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVRKYESSRSRSRSRSPSRSPSRSRSPKRVRSRSLERSVSRSRSRSQSASPIKSSRPRSRSRSRSRSGSGSPHQVLSGSG*

>Glyma.04g229300.8.p sequence-type=predicted peptide transcript=Glyma.04g229300.8 locus=Glyma.04g229300 id=Glyma.04g229300.8.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MSGRFSRTIYVGNLPSDIRESEIEDLFYKYGRIMDIELKVPPRPPCYCFVEFDNARDAEDAIRGRDGYNFDGCRLRVELAHGGRGPSSSDRRGYGGGGGNGGAGGGRFGISRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVRKYESSRSRSRSRSPSRSPSRSRSPKRVRSRSLERSVSRSRSRSQSASPIKSSRPRSRSRSRSRSGSGSPHQVLSGSG*

>Glyma.04g229300.9.p sequence-type=predicted peptide transcript=Glyma.04g229300.9 locus=Glyma.04g229300 id=Glyma.04g229300.9.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MSGRFSRTIYVGNLPSDIRESEIEDLFYKYGRIMDIELKVPPRPPCYCFVEFDNARDAEDAIRGRDGYNFDGCRLRVELAHGGRGPSSSDRRGYGGGGGNGGAGGGRFGISRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVRKYESSRSRSRSRSPSRSPSRSRSPKRVRRSLERSVSRSRSRSQSASPIKSSRPRSRSRSRSRSGSGSPHQVLSGSG*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo