SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.04g225100

Feature Type:gene_model
Chromosome:Gm04
Start:48355270
stop:48366743
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.04g225100
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G33400.1AT JGI N/AIEA
GO:0005515GO-mf protein binding JGI N/AIEA
KOG2084 KOG Predicted histone tail methylase containing SET domain JGI N/AIEA
PTHR12197PantherFam HISTONE-LYSINE N-METHYLTRANSFERASE SMYD JGI N/AIEA
PF00856Pfam SET domain JGI N/AIEA
PF13414Pfam TPR repeat JGI N/AIEA

Gene model name correspondences to Glyma.04g225100 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma04g40310 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.04g225100
>Glyma.04g225100.1 sequence-type=CDS polypeptide=Glyma.04g225100.1.p locus=Glyma.04g225100 id=Glyma.04g225100.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGAGACTCTGAAAGCTGCAATTCCAGAAAACCTGAAGCGAGCGATAGGGGATAGCGATGTCGATGACCTTCGCAGCACATGCTCTTCTCTTCACCGCTTCTTTCTCCACTTCCACCCATTTCACCAGATGATCACTGAACTCGCAGATCCAAAGTATGCTCTGTGCGCCAAGAACAAGGACGCTGCGTTGAAATCCAGGCTGCTTGGTAATCAGTGCTTCTCCAACGCAGATTATGCTAAGGCCTTGGACTGCTACACTCAGGCATTGCGCGAGGCTCCATTAGACACCGCCAGTGATATGGAGAGTAATCTTGTTGTTGCAACATTATATATCAATCGTGCTACTGTATTGCATAAAATGAGTCTTATAGTAGAATGCTTACGAGATTGCACTCGAGCTCTTCAAATTTGTCCAAGCTATGCTAAGGCATGGTACAGGAGAGGTAAGGCAAATGCTTCATTGGGAAATTATAAAAATGCAATTTGTGATCTAAATGTGGCTAAGAGTGTGGAACCTTCAATGGGTGGGAAGAGACAAATAGAAGGTGAACTGAAAATTCTTTTAGACCAATGCAAAAGCACGACTGCAGTAGAACAAATACAACATACAGAGAACAACTGCAATACTGTGGGTGAGATGCCTCACATAAAGCTACAGCGGGTCTCCACACCTGATAAAGGAAGAGGCATCGTGTCATCATGTGTCATTTCACCAGGTTTTTTGGTTCATGCTGAAGAACCTTATGCTATGATAATATTAAAGCAATGTCGGGAAACCCATTGCCATTATTGCTTGAACGACCTACCTGCTGATAGAGTTCCTTGTATATTGTGTTCAATACCATTGTATTGCTCCCACCAATGCCGGATACGGGCAACTGGGCAAATGTTCAAAATTTACCCAGAGTATAATGGCTTTTTCAAAAACTTACCCAGTGATCTTGGAGAATATGCTGCTGAAGTTATTCAATGCAATGATTCTGAACTGGAAATTGGGGATATTACTGAACATAAACATGAATGTCAAGGTGTACATTGGCCTATGGTACTTCCGTCTGAGATAGTTTTGGCTGGTCGAATCCTAGCTAGGTTTTTGCTAAATATCCCACCTGAAGATATTATAAACTTTGTGGAAAGGCTGGAGCTTTCTCATTGTTACAAACAAATGTCATCTGAAAGAAAGTTGGATTCACATATATATGCCATTGTATTATTATATTGTCTTCAACACTCTTGTGGAATTATGTTTTCCATAGACGAAGTCTTCATATCACAGGTTGTTATAATTATTTCTCAAATTAAAGTAAATTGTATGACTGTCGTTCGTTTAAAATCAATAGACGCCCATGGACTATCAGGTCGCTTTGGAGAATTTCCATTTCAATCTGGTGCTCATTCAACTAGTAATGTGGAACAGGTCAGAGTGGGTAAAGCTATTTATAAAGCTGGCAGTTTATTCAACCATTCTTGCCAGCCAAATATTCATGCATATTTTCTTTCACGCACTCTTTATTTACGAACCACAAATGTTGTAGCAGCCGAGAGTCAACTAGAATTATCTTATGGTCCACAGGTTGGGTTGTGGGATTGTAAAGATCGCCTTAATTTTCTCAAAGACGAGTATGCATTTCTTTGTCAGTGTACTGGTTGTTCAGAAGTTAATCTATCTGACATTGTCCTCAATGCCTTCCATTGTGTCAATACAAATTGTTCTGGCACAGTGTTGGAAAGCAGAGTACATGACAGTGAGAAGCAGAAAATCAAGCACTTCCCTATTTCTGACCATGTTGACAAAAATGCTGACATTTATGAAGTATGTCTTCGTGTCTTCAAACAAAATGGTGCCTCTATTGATATTCAACCTGGATACTGTTTGAAATGTGGTTCTTACTGTGATTTGGAGTCTTCACGTGCTGCAGTCAGTAAAGCTTTAACATGCATAAAAAGGTTGCAGGATGCAATATTGTCACAACAAATTTCAAGTATTACTATTTCTGATGCTTTGAAATCTCTTCGATTGCTAAGATTAAATTTGCATGCATACAACAAGCTTATTGCAGAGGCAGAAGACAGCATTGCCCAGGCATTTTGTTTAGTGGGAGAATTACAATTATCTTTGGATTATTGTAAAGCATCTATCCAGATTCTGGAAAAGCTATATGATACTGATGATATTGTTATTGCATATGAACTTGTGAAGCTTTCTTCCATCCAACTTTCCTTGGGTGATGGTACTGCTGTGGAAAGTATAAGTCGAATAGATGATATCTTCTCACGTTATTATGGACTTCATGCAGACTTGGTCTTCCCTTATCTTCAATACCTTAGGAGAGAAATTAAGAAATTTTCAGTGAAGGCTCTCCAATAA
Predicted protein sequences of Glyma.04g225100
>Glyma.04g225100.1.p sequence-type=predicted peptide transcript=Glyma.04g225100.1 locus=Glyma.04g225100 id=Glyma.04g225100.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
METLKAAIPENLKRAIGDSDVDDLRSTCSSLHRFFLHFHPFHQMITELADPKYALCAKNKDAALKSRLLGNQCFSNADYAKALDCYTQALREAPLDTASDMESNLVVATLYINRATVLHKMSLIVECLRDCTRALQICPSYAKAWYRRGKANASLGNYKNAICDLNVAKSVEPSMGGKRQIEGELKILLDQCKSTTAVEQIQHTENNCNTVGEMPHIKLQRVSTPDKGRGIVSSCVISPGFLVHAEEPYAMIILKQCRETHCHYCLNDLPADRVPCILCSIPLYCSHQCRIRATGQMFKIYPEYNGFFKNLPSDLGEYAAEVIQCNDSELEIGDITEHKHECQGVHWPMVLPSEIVLAGRILARFLLNIPPEDIINFVERLELSHCYKQMSSERKLDSHIYAIVLLYCLQHSCGIMFSIDEVFISQVVIIISQIKVNCMTVVRLKSIDAHGLSGRFGEFPFQSGAHSTSNVEQVRVGKAIYKAGSLFNHSCQPNIHAYFLSRTLYLRTTNVVAAESQLELSYGPQVGLWDCKDRLNFLKDEYAFLCQCTGCSEVNLSDIVLNAFHCVNTNCSGTVLESRVHDSEKQKIKHFPISDHVDKNADIYEVCLRVFKQNGASIDIQPGYCLKCGSYCDLESSRAAVSKALTCIKRLQDAILSQQISSITISDALKSLRLLRLNLHAYNKLIAEAEDSIAQAFCLVGELQLSLDYCKASIQILEKLYDTDDIVIAYELVKLSSIQLSLGDGTAVESISRIDDIFSRYYGLHADLVFPYLQYLRREIKKFSVKALQ*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo