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Report for Sequence Feature Glyma.04g223500

Feature Type:gene_model
Chromosome:Gm04
Start:48232870
stop:48236109
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.04g223500
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT2G38560.1AT TFIIS JGI N/AIEA
GO:0006351GO-bp transcription, DNA-templated JGI N/AIEA
GO:0005634GO-cc nucleus JGI N/AIEA
GO:0003676GO-mf nucleic acid binding JGI N/AIEA
GO:0003677GO-mf DNA binding JGI N/AIEA
GO:0008270GO-mf zinc ion binding JGI N/AIEA
K03145KEGG Transcription machinery JGI N/AIEA
KOG1105 KOG Transcription elongation factor TFIIS/Cofactor of enhancer-binding protein Sp1 JGI N/AIEA
PTHR11477PantherFam TRANSCRIPTION FACTOR S-II ZINC FINGER DOMAIN-CONTAINING PROTEIN JGI N/AIEA
PF01096Pfam Transcription factor S-II (TFIIS) JGI N/AIEA
PF07500Pfam Transcription factor S-II (TFIIS), central domain JGI N/AIEA
PF08711Pfam TFIIS helical bundle-like domain JGI N/AIEA

Gene model name correspondences to Glyma.04g223500 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma04g40150 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.04g223500
>Glyma.04g223500.1 sequence-type=CDS polypeptide=Glyma.04g223500.1.p locus=Glyma.04g223500 id=Glyma.04g223500.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGTTCTCTTCCTCTCACTTGCCACACCACCGCCGCCGCAGGAGACAACAACAACAACAACACGTTCCATTCTCGAGGAGAGAGTGGTTGGGTTCGATGGAGAAGGAGTTGGTGGAATTGTACGAAGCGGCGAAGAAGGCGGCGGATGCTGCCATCTCCGGCGACGGCAAACATGAGGAAAGCCGATGCATCGATGCGCTCGAGCAGCTCAAGAAGTTTCCCGTTAATTACAAGATTCTCGTCAACACCCAGGTGGGTAAACATCTTAAAGTTTTGACAAAGCACCCGAGGCTGAAAATTAAGGCCTTTGCTATTGACCTAATTGAGATATGGAAAGGCATAATTATCAAGGAAACAAGCAAAAATAAAAATGGGGGCTCTGATAGTAAGGTTGAGTCGGCTAATGGGGAGAAATCTAAAGCTGGGAAAATGCAAAAGAGTCCTTCGGTAAAGGTTGAAAAAGGTGAAACTGTTAAGGTTGAGAAAATTGATAGGAATGGTACAACAAAGTCAAGCTCAGAAAATATGAAAAAGGTACAAAACGATGTCAAGAATGAGAAAACTGATCGTTCTGCAAGTGTCAAGGTGGAAAAGATAGCCAAGGAGGAAAAGCCAGTTTCTGGAGCAAAGAAAATGTCATCCAGTTCTGCCGCTCCCCCAAAACTAAAAACTATGATTAAATCTAATGATGCAACACGAGACAAAATAAGGGAAATTCTCCACGAGGCTTTATCCAAGGTTACTGGAGAAGCTGATGAAGATCTTGTAGATGTAGTCAATAATTCTGATCCTATCCGTGTTGCTGTGACAGTGGAGTCTGTATTATTTGAAAAATGGGGCCCTTCTAATGGGGCACAAAAGGTCAAGTATAGGTCCTTAATGTTTAACCTTAAGGATTCAAACAACCCTGATTTCCGGAGAAAAGTTCTGCTTGGTGTTATTGAGCCAGAGCAACTGATCAACATGAGCACAGCAGAAATGGCTAGTGAGCAAAGGAAGCAGGAATATCAGAAAATCACAGAGAAAGCTTTGTTTGAATGTGAGCGTGGAGGTCCGCCAAAAGCTACAACCGATCAATTTAAGTGTGGCCGATGTGGTCAAAGAAAGACCACCTATTACCAAATGCAGACTCGCAGTGCTGATGAACCTATGACAACCTATGTCACTTGTGTTGTCTGCAATAACCGTTGGAAGTTCTGTTAG
Predicted protein sequences of Glyma.04g223500
>Glyma.04g223500.1.p sequence-type=predicted peptide transcript=Glyma.04g223500.1 locus=Glyma.04g223500 id=Glyma.04g223500.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MFSSSHLPHHRRRRRQQQQQHVPFSRREWLGSMEKELVELYEAAKKAADAAISGDGKHEESRCIDALEQLKKFPVNYKILVNTQVGKHLKVLTKHPRLKIKAFAIDLIEIWKGIIIKETSKNKNGGSDSKVESANGEKSKAGKMQKSPSVKVEKGETVKVEKIDRNGTTKSSSENMKKVQNDVKNEKTDRSASVKVEKIAKEEKPVSGAKKMSSSSAAPPKLKTMIKSNDATRDKIREILHEALSKVTGEADEDLVDVVNNSDPIRVAVTVESVLFEKWGPSNGAQKVKYRSLMFNLKDSNNPDFRRKVLLGVIEPEQLINMSTAEMASEQRKQEYQKITEKALFECERGGPPKATTDQFKCGRCGQRKTTYYQMQTRSADEPMTTYVTCVVCNNRWKFC*






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