SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.04g220500

Feature Type:gene_model
Chromosome:Gm04
Start:47935163
stop:47948617
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.04g220500
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT2G40470.1AT ASL11,LBD15 JGI N/AIEA
PTHR31301PantherFam LOB DOMAIN-CONTAINING PROTEIN 4-RELATED JGI N/AIEA
PF03195Pfam Lateral organ boundaries (LOB) domain JGI N/AIEA

Proteins Associated with Glyma.04g220500
LocusGene SymbolProtein Name
LBD19 LBD domain-containing transcription factor

Gene model name correspondences to Glyma.04g220500 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma04g39830 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.04g220500
>Glyma.04g220500.2 sequence-type=CDS polypeptide=Glyma.04g220500.2.p locus=Glyma.04g220500 id=Glyma.04g220500.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGTCCAGAGAAAGGGAGAGATTTGATGAGATAGGGAAGAAGATCAAGAGGGAAGGAGATGTTTCATCTCAAATGGGAAGAAGACACATGTTAGGCCCTCCAGGAACCCTAAATACTATCACCCCTTGTGCGGCATGTAAGTTGTTGAGAAGAAGATGTGCCCAAGAATGTCCCTTTTCTCCATATTTCTCTCCCCATGAGCCCCAAAAATTTGCTTCTGTCCACAAAGTTTTTGGTGCCAGCAACGTCTCAAAGATGCTCATGGAAGTACCAGAGTGTCAAAGAGCTGATGCAGCAAATAGTCTAGTATATGAGGCTAATGTGAGGCTAAGAGATCCTGTGTATGGATGCATGGGTGCAATTTCTGCTTTGCAACAGCAAGTTCAATCTTTACAAGCTGAACTTAATGCAGTGAGAGGTGAAATACTTAAATACAAACTCAGGGAAGCTAACATGATACCCTCCTCTCATGTTGCAATGCTCCCTTCATCTGGGGCTGTTTCAATTGCTGCTCCACCGCCGCCACCACCACCACCACCACCTCTTCCTCCTCCTTCTCTTCCTCTTCCTCTTCCTCTAACTTCTTCCCCTCCTTCCATGTACATCCAACAAAGGGATCCCACCACTTATACCACAATTTCAAGTGATAATATCTCCTATTTTGTCTAA

>Glyma.04g220500.3 sequence-type=CDS polypeptide=Glyma.04g220500.3.p locus=Glyma.04g220500 id=Glyma.04g220500.3.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGTCCAGAGAAAGGGAGAGATTTGATGAGATAGGGAAGAAGATCAAGAGGGAAGGAGATGTTTCATCTCAAATGGGAAGAAGACACATGTTAGGCCCTCCAGGAACCCTAAATACTATCACCCCTTGTGCGGCATGTAAGTTGTTGAGAAGAAGATGTGCCCAAGAATGTCCCTTTTCTCCATATTTCTCTCCCCATGAGCCCCAAAAATTTGCTTCTGTCCACAAAGTTTTTGGTGCCAGCAACGTCTCAAAGATGCTCATGGAAGTACCAGAGTGTCAAAGAGCTGATGCAGCAAATAGTCTAGTATATGAGGCTAATGTGAGGCTAAGAGATCCTGTGTATGGATGCATGGGTGCAATTTCTGCTTTGCAACAGCAAGTTCAATCTTTACAAGCTGAACTTAATGCAGTGAGAGGTGAAATACTTAAATACAAACTCAGGGAAGCTAACATGATACCCTCCTCTCATGTTGCAATGCTCCCTTCATCTGGGGCTGTTTCAATTGCTGCTCCACCGCCGCCACCACCACCACCACCACCTCTTCCTCCTCCTTCTCTTCCTCTTCCTCTTCCTCTAACTTCTTCCCCTCCTTCCATGTACATCCAACAAAGGGATCCCACCACTTATACCACAATTTCAAGTGATAATATCTCCTATTTTGTCTAA

>Glyma.04g220500.4 sequence-type=CDS polypeptide=Glyma.04g220500.4.p locus=Glyma.04g220500 id=Glyma.04g220500.4.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGTCCAGAGAAAGGGAGAGATTTGATGAGATAGGGAAGAAGATCAAGAGGGAAGGAGATGTTTCATCTCAAATGGGAAGAAGACACATGTTAGGCCCTCCAGGAACCCTAAATACTATCACCCCTTGTGCGGCATGTAAGTTGTTGAGAAGAAGATGTGCCCAAGAATGTCCCTTTTCTCCATATTTCTCTCCCCATGAGCCCCAAAAATTTGCTTCTGTCCACAAAGTTTTTGGTGCCAGCAACGTCTCAAAGATGCTCATGGAAGTACCAGAGTGTCAAAGAGCTGATGCAGCAAATAGTCTAGTATATGAGGCTAATGTGAGGCTAAGAGATCCTGTGTATGGATGCATGGGTGCAATTTCTGCTTTGCAACAGCAAGTTCAATCTTTACAAGCTGAACTTAATGCAGTGAGAGGTGAAATACTTAAATACAAACTCAGGGAAGCTAACATGATACCCTCCTCTCATGTTGCAATGCTCCCTTCATCTGGGGCTGTTTCAATTGCTGCTCCACCGCCGCCACCACCACCACCACCACCTCTTCCTCCTCCTTCTCTTCCTCTTCCTCTTCCTCTAACTTCTTCCCCTCCTTCCATGTACATCCAACAAAGGGATCCCACCACTTATACCACAATTTCAAGTGATAATATCTCCTATTTTGTCTAA
Predicted protein sequences of Glyma.04g220500
>Glyma.04g220500.2.p sequence-type=predicted peptide transcript=Glyma.04g220500.2 locus=Glyma.04g220500 id=Glyma.04g220500.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MSRERERFDEIGKKIKREGDVSSQMGRRHMLGPPGTLNTITPCAACKLLRRRCAQECPFSPYFSPHEPQKFASVHKVFGASNVSKMLMEVPECQRADAANSLVYEANVRLRDPVYGCMGAISALQQQVQSLQAELNAVRGEILKYKLREANMIPSSHVAMLPSSGAVSIAAPPPPPPPPPPLPPPSLPLPLPLTSSPPSMYIQQRDPTTYTTISSDNISYFV*

>Glyma.04g220500.3.p sequence-type=predicted peptide transcript=Glyma.04g220500.3 locus=Glyma.04g220500 id=Glyma.04g220500.3.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MSRERERFDEIGKKIKREGDVSSQMGRRHMLGPPGTLNTITPCAACKLLRRRCAQECPFSPYFSPHEPQKFASVHKVFGASNVSKMLMEVPECQRADAANSLVYEANVRLRDPVYGCMGAISALQQQVQSLQAELNAVRGEILKYKLREANMIPSSHVAMLPSSGAVSIAAPPPPPPPPPPLPPPSLPLPLPLTSSPPSMYIQQRDPTTYTTISSDNISYFV*

>Glyma.04g220500.4.p sequence-type=predicted peptide transcript=Glyma.04g220500.4 locus=Glyma.04g220500 id=Glyma.04g220500.4.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MSRERERFDEIGKKIKREGDVSSQMGRRHMLGPPGTLNTITPCAACKLLRRRCAQECPFSPYFSPHEPQKFASVHKVFGASNVSKMLMEVPECQRADAANSLVYEANVRLRDPVYGCMGAISALQQQVQSLQAELNAVRGEILKYKLREANMIPSSHVAMLPSSGAVSIAAPPPPPPPPPPLPPPSLPLPLPLTSSPPSMYIQQRDPTTYTTISSDNISYFV*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo