SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.04g218400

Feature Type:gene_model
Chromosome:Gm04
Start:47763854
stop:47767615
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.04g218400
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G39410.1AT ATWRKY13,WRKY13 JGI N/AIEA
GO:0006355GO-bp regulation of transcription, DNA-templated JGI N/AIEA
GO:0003700GO-mf DNA-binding transcription factor activity JGI N/AIEA
GO:0043565GO-mf sequence-specific DNA binding JGI N/AIEA
PTHR31221PantherFam WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED JGI N/AIEA
PTHR31221:SF17PantherFam WRKY TRANSCRIPTION FACTOR 13-RELATED JGI N/AIEA
PF03106Pfam WRKY DNA -binding domain JGI N/AIEA

Proteins Associated with Glyma.04g218400
LocusGene SymbolProtein Name
WRKY45 WRKY transcription factor 45
WRKY35 WRKY Transcripiton Factor

Gene model name correspondences to Glyma.04g218400 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma04g39621 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.04g218400
>Glyma.04g218400.1 sequence-type=CDS polypeptide=Glyma.04g218400.1.p locus=Glyma.04g218400 id=Glyma.04g218400.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGATGTCAACAACATCCCAAACTAATGTTAACCATAGCTTGTTTGAAGAGCAAGATCAGATCCCTACGCAGATGGGGTTGTTCAATATTCCTTTCCCACCAAACCAAACATACCCTCCTTTGGGTTGCCAAACAGGCACTTTGAAATCCATCAGTGCAATAGCTCCTTCACTTTCATCTGCTACAAGTTTTTCTGAAACCCTACTTTCAACCGCAGTTCAAAGACCACGAGAAGATCTCACTTCAAATTTGCTAGCTGGAGGAGGAGGCCAACTCCTTTCCTTGAACAGATCCAGAGTGAATTCATGGGCATGGGAAGAAGTAAGCGATTGTTTGATGGGTAAAAGAATTGGAGGAGATGATAATCATCATCTAGGGGTTTCTGCCATGAAGATGAAGAAAATGAAAGCAAGGAGAAAGGTGAGGGAGCCAAGGTTTTGCTTCAAGACTATGAGCGATGTAGATGTGTTGGATGATGGCTACAAGTGGAGGAAGTACGGACAGAAAGTGGTAAAGAACACACAACACCCGAGAAGCTACTACCGTTGCACACAAGATAACTGTCGAGTAAAGAAACGCGTGGAGCGCTTGGCAGAGGATCCAAGGATGGTGATAACCACATATGAAGGGAGACACGTGCACTCGCCATCAAATGAACTTGAAGACTCGCAAACCCCTTCTGAACTTAGTAATTTCTTGTGGTAG

>Glyma.04g218400.2 sequence-type=CDS polypeptide=Glyma.04g218400.2.p locus=Glyma.04g218400 id=Glyma.04g218400.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGATGTCAACAACATCCCAAACTAATGTTAACCATAGCTTGTTTGAAGAGCAAGATCAGATCCCTACGCAGATGGGGTTGTTCAATATTCCTTTCCCACCAAACCAAACATACCCTCCTTTGGGTTGCCAAACAGGCACTTTGAAATCCATCAGTGCAATAGCTCCTTCACTTTCATCTGCTACAAGTTTTTCTGAAACCCTACTTTCAACCGCAGTTCAAAGACCACGAGAAGATCTCACTTCAAATTTGCTAGCTGGAGGAGGAGGCCAACTCCTTTCCTTGAACAGATCCAGAGTGAATTCATGGGCATGGGAAGAAGTAAGCGATTGTTTGATGGGTAAAAGAATTGGAGGAGATGATAATCATCATCTAGGGGTTTCTGCCATGAAGATGAAGAAAATGAAAGCAAGGAGAAAGGTGAGGGAGCCAAGGTTTTGCTTCAAGACTATGAGCGATGTAGATGTGTTGGATGATGGCTACAAGTGGAGGAAGTACGGACAGAAAGTGGTAAAGAACACACAACACCCGAGCTACTACCGTTGCACACAAGATAACTGTCGAGTAAAGAAACGCGTGGAGCGCTTGGCAGAGGATCCAAGGATGGTGATAACCACATATGAAGGGAGACACGTGCACTCGCCATCAAATGAACTTGAAGACTCGCAAACCCCTTCTGAACTTAGTAATTTCTTGTGGTAG

>Glyma.04g218400.4 sequence-type=CDS polypeptide=Glyma.04g218400.4.p locus=Glyma.04g218400 id=Glyma.04g218400.4.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGATGTCAACAACATCCCAAACTAATGTTAACCATAGCTTGTTTGAAGAGCAAGATCAGATCCCTACGCAGATGGGGTTGTTCAATATTCCTTTCCCACCAAACCAAACATACCCTCCTTTGGGTTGCCAAACAGGCACTTTGAAATCCATCAGTGCAATAGCTCCTTCACTTTCATCTGCTACAAGTTTTTCTGAAACCCTACTTTCAACCGCAGTTCAAAGACCACGAGAAGATCTCACTTCAAATTTGCTAGCTGGAGGAGGAGGCCAACTCCTTTCCTTGAACAGATCCAGAGTGAATTCATGGGCATGGGAAGAAGTAAGCGATTGTTTGATGGGTAAAAGAATTGGAGGAGATGATAATCATCATCTAGGGGTTTCTGCCATGAAGATGAAGAAAATGAAAGCAAGGAGAAAGGTGAGGGAGCCAAGGTTTTGCTTCAAGACTATGAGCGATGTAGATGTGTTGGATGATGGCTACAAGTGGAGGAAGTACGGACAGAAAGTGGTAAAGAACACACAACACCCGAGTGCAACATGTTGCAGAAATTATAAACTTCTTTTTCGCTGGAAGGACTGA

>Glyma.04g218400.7 sequence-type=CDS polypeptide=Glyma.04g218400.7.p locus=Glyma.04g218400 id=Glyma.04g218400.7.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGATGTCAACAACATCCCAAACTAATGTTAACCATAGCTTGTTTGAAGAGCAAGATCAGATCCCTACGCAGATGGGGTTGTTCAATATTCCTTTCCCACCAAACCAAACATACCCTCCTTTGGGTTGCCAAACAGGCACTTTGAAATCCATCAGTGCAATAGCTCCTTCACTTTCATCTGCTACAAGTTTTTCTGAAACCCTACTTTCAACCGCAGTTCAAAGACCACGAGAAGATCTCACTTCAAATTTGCTAGCTGGAGGAGGAGGCCAACTCCTTTCCTTGAACAGATCCAGAGTGAATTCATGGGCATGGGAAGAAGTAAGCGATTGTTTGATGGGTAAAAGAATTGGAGGAGATGATAATCATCATCTAGGGGTTTCTGCCATGAAGATGAAGAAAATGAAAGCAAGGAGAAAGGTGAGGGAGCCAAGGTTTTGCTTCAAGACTATGAGCGATGTAGATGTGTTGGATGATGGCTACAAGTGGAGGAAGTACGGACAGAAAGTGGTAAAGAACACACAACACCCGAGAAATTATAAACTTCTTTTTCGCTGGAAGGACTGA

>Glyma.04g218400.8 sequence-type=CDS polypeptide=Glyma.04g218400.8.p locus=Glyma.04g218400 id=Glyma.04g218400.8.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGATGTCAACAACATCCCAAACTAATGTTAACCATAGCTTGTTTGAAGAGCAAGATCAGATCCCTACGCAGATGGGGTTGTTCAATATTCCTTTCCCACCAAACCAAACATACCCTCCTTTGGGTTGCCAAACAGGCACTTTGAAATCCATCAGTGCAATAGCTCCTTCACTTTCATCTGCTACAAGTTTTTCTGAAACCCTACTTTCAACCGCAGTTCAAAGACCACGAGAAGATCTCACTTCAAATTTGCTAGCTGGAGGAGGAGGCCAACTCCTTTCCTTGAACAGATCCAGAGTGAATTCATGGGCATGGGAAGAAGTAAGCGATTGTTTGATGGGTAAAAGAATTGGAGGAGATGATAATCATCATCTAGGGGTTTCTGCCATGAAGATGAAGAAAATGAAAGCAAGGAGAAAGGTGAGGGAGCCAAGGTTTTGCTTCAAGACTATGAGCGATGTAGATGTGTTGGATGATGGCTACAAGTGGAGGAAGTACGGACAGAAAGTGGTAAAGAACACACAACACCCGAGAAATTATAAACTTCTTTTTCGCTGGAAGGACTGA
Predicted protein sequences of Glyma.04g218400
>Glyma.04g218400.1.p sequence-type=predicted peptide transcript=Glyma.04g218400.1 locus=Glyma.04g218400 id=Glyma.04g218400.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MMSTTSQTNVNHSLFEEQDQIPTQMGLFNIPFPPNQTYPPLGCQTGTLKSISAIAPSLSSATSFSETLLSTAVQRPREDLTSNLLAGGGGQLLSLNRSRVNSWAWEEVSDCLMGKRIGGDDNHHLGVSAMKMKKMKARRKVREPRFCFKTMSDVDVLDDGYKWRKYGQKVVKNTQHPRSYYRCTQDNCRVKKRVERLAEDPRMVITTYEGRHVHSPSNELEDSQTPSELSNFLW*

>Glyma.04g218400.2.p sequence-type=predicted peptide transcript=Glyma.04g218400.2 locus=Glyma.04g218400 id=Glyma.04g218400.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MMSTTSQTNVNHSLFEEQDQIPTQMGLFNIPFPPNQTYPPLGCQTGTLKSISAIAPSLSSATSFSETLLSTAVQRPREDLTSNLLAGGGGQLLSLNRSRVNSWAWEEVSDCLMGKRIGGDDNHHLGVSAMKMKKMKARRKVREPRFCFKTMSDVDVLDDGYKWRKYGQKVVKNTQHPSYYRCTQDNCRVKKRVERLAEDPRMVITTYEGRHVHSPSNELEDSQTPSELSNFLW*

>Glyma.04g218400.4.p sequence-type=predicted peptide transcript=Glyma.04g218400.4 locus=Glyma.04g218400 id=Glyma.04g218400.4.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MMSTTSQTNVNHSLFEEQDQIPTQMGLFNIPFPPNQTYPPLGCQTGTLKSISAIAPSLSSATSFSETLLSTAVQRPREDLTSNLLAGGGGQLLSLNRSRVNSWAWEEVSDCLMGKRIGGDDNHHLGVSAMKMKKMKARRKVREPRFCFKTMSDVDVLDDGYKWRKYGQKVVKNTQHPSATCCRNYKLLFRWKD*

>Glyma.04g218400.7.p sequence-type=predicted peptide transcript=Glyma.04g218400.7 locus=Glyma.04g218400 id=Glyma.04g218400.7.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MMSTTSQTNVNHSLFEEQDQIPTQMGLFNIPFPPNQTYPPLGCQTGTLKSISAIAPSLSSATSFSETLLSTAVQRPREDLTSNLLAGGGGQLLSLNRSRVNSWAWEEVSDCLMGKRIGGDDNHHLGVSAMKMKKMKARRKVREPRFCFKTMSDVDVLDDGYKWRKYGQKVVKNTQHPRNYKLLFRWKD*

>Glyma.04g218400.8.p sequence-type=predicted peptide transcript=Glyma.04g218400.8 locus=Glyma.04g218400 id=Glyma.04g218400.8.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MMSTTSQTNVNHSLFEEQDQIPTQMGLFNIPFPPNQTYPPLGCQTGTLKSISAIAPSLSSATSFSETLLSTAVQRPREDLTSNLLAGGGGQLLSLNRSRVNSWAWEEVSDCLMGKRIGGDDNHHLGVSAMKMKKMKARRKVREPRFCFKTMSDVDVLDDGYKWRKYGQKVVKNTQHPRNYKLLFRWKD*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo