SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.04g215800

Feature Type:gene_model
Chromosome:Gm04
Start:47529601
stop:47532509
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.04g215800
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G64040.1AT PSAN JGI N/AIEA
GO:0015979GO-bp photosynthesis JGI N/AIEA
GO:0009522GO-cc photosystem I JGI N/AIEA
GO:0042651GO-cc thylakoid membrane JGI N/AIEA
GO:0005516GO-mf calmodulin binding JGI N/AIEA
K02701KEGG Photosynthesis proteins JGI N/AIEA
PTHR36814PantherFam PHOTOSYSTEM I REACTION CENTER SUBUNIT N, CHLOROPLASTIC JGI N/AIEA
PF05479Pfam Photosystem I reaction centre subunit N (PSAN or PSI-N) JGI N/AIEA

Gene model name correspondences to Glyma.04g215800 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma04g39370 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.04g215800
>Glyma.04g215800.5 sequence-type=CDS polypeptide=Glyma.04g215800.5.p locus=Glyma.04g215800 id=Glyma.04g215800.5.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCTGCCATGAACTCTAGCGTATTGGCCTGTAGCTATGCCATATCAGGTGCAGCGTGTTCGGAGCTCAATGGGAAGGTCACTTCCGTGGCCTATGTTGCATGCTCTGGCTACAAGTTGCCATTGATCAAAGCTGAGGCCAGAGTTCCTAAAGCCAAAGAATCTGAAGGAGGAAGGAGAGGTGCCCTTGTTCTCTTGGCAGCTACCCTTTTCACCTCTGCAGCTTCCAATTCTTCTGCCAATGCTGGGATCATTGAAGATTACCTTGAGAGGAGCAAGGCCAACAAGGAATTGAATGACAAGAAGAGGTTAGCTACTACTGGAGCAAACTTTGCAAGAGCATACACCGTGGAATTCGGTAGTTGCAAGTTCCCTGAGAACTTCACTGGTTGCCAAGATCTTGCCAAACAAAAGAAAGTGCCATTCCTTAGTGACGACTTGGAGCTTGAATGTGAAGGAAAGGACAAATACAAGTGCGGTTCTAATGTTTTCTGGAAATGGTGA
Predicted protein sequences of Glyma.04g215800
>Glyma.04g215800.5.p sequence-type=predicted peptide transcript=Glyma.04g215800.5 locus=Glyma.04g215800 id=Glyma.04g215800.5.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MAAMNSSVLACSYAISGAACSELNGKVTSVAYVACSGYKLPLIKAEARVPKAKESEGGRRGALVLLAATLFTSAASNSSANAGIIEDYLERSKANKELNDKKRLATTGANFARAYTVEFGSCKFPENFTGCQDLAKQKKVPFLSDDLELECEGKDKYKCGSNVFWKW*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo