SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.04g212100

Feature Type:gene_model
Chromosome:Gm04
Start:47212560
stop:47217611
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.04g212100
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G09300.1AT JGI N/AIEA
1.2.1.25EC branched-chain alpha-keto acid dehydrogenase system JGI N/AIEA
1.2.4.4EC 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) JGI N/AIEA
GO:0008152GO-bp metabolic process JGI N/AIEA
GO:0016624GO-mf oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor JGI N/AIEA
K00166KEGG Valine, leucine and isoleucine degradation JGI N/AIEA
PTHR11516PantherFam PYRUVATE DEHYDROGENASE E1 COMPONENT, ALPHA SUBUNIT BACTERIAL AND ORGANELLAR JGI N/AIEA
PF00676Pfam Dehydrogenase E1 component JGI N/AIEA

Gene model name correspondences to Glyma.04g212100 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma04g39001 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.04g212100
>Glyma.04g212100.1 sequence-type=CDS polypeptide=Glyma.04g212100.1.p locus=Glyma.04g212100 id=Glyma.04g212100.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGAGGAAATTCACCACCATATTCTCCCACATCAAATCAACAAAGATGAACTTCTCCGTTTCGCTTCTTCATCGGAGCTCTCCATTTTGCCCCAATCAACCACCACACCCTAATTTCAAGAACCTCACATGGCAGAATCGCGATTCACTACTATTATTTCCCCTTCTCTGTTCGCGCCACTTTGCCTCCACTACCGCGCAGAATCCTTCCACATTGAATGCTCTTCAGGATCATTATCAGGCCATTGATTTTCCTGGAGGAGCAGTACAATTCATCCCTGAAATGAGGTTTATATCCGAATCACCTAAAGAGAGAATACCTTGCTACCGTGTCCTTGATGATAATGGGCAACCAATTTTGGGCCATAATTTTGTGCAGGTCAGCAAGGAAGTTGCTGTTAAGATGTATACTGACATGGTCACTCTCCGATCTATGGACACTATCTTCTATGAAGCACAAAGGCAAGGTAGAATATCATTTTATGTGACAGCAATTGGGGAGGAGGCTATCAATGTTGCTTCAGCTGCAGCTCTTGCCATGGACGATGTTGTTTTCCCTCAGTATAGGGAAGCGGGAGTCTTGTTATGGCGTGGTTTCACTTTGCAAGAATTTGCAAACCAGTTATTTTCCAATATATATGATTATGGGAAAGGAAGGCAGATGCCAGCTCATTATGGGTCCAAAAAGCACAATTACTTTACAGTAGCATCAACTATTGCTACACAAATTTCCCATGCTGTTGGAGCCGCTTATTCCTTAAAGATGGATAAAAAGGATGCATGTGCCGTCACTTACTTCGGTGATGGTGGCTCAAGTGAGGGTGATTTCCACGCTGCCTTAAATTTTGCAGCAGTTTTGGAGGCCCCAGTTATTTTTATATGCCGGAACAATGGATGGGCTATCAGCACACCCATTTCAGATCAGTTTCGAAGTGATGGTGTTGTTGTGAAAGGGCAGGCATATGGAGTTCGTAGCATTCGTGTAGATGGCAATGATGCCCTGGCTATCTATAGTGCTATTCAAGCTGCTCGTCAAATGGCAATTACTGAAGAGAGACCAATTCTAATAGAAGCTCTTACATATAGAGTTGGACACCACACCACATCAGATGACTCTACCAAGTATCGTCCAGCGAATGAGATTGAATGGTGGAGAGTGGCACGTGATCCTGTGGTTAGATTTAGAAAGTGGATAGAAAAGCATGGCTGGTGGAATGATATGGCTGAGTCAGAGCTTATAAACAATTTGAGACAGCAGCTTCTACATACAATTCAAGAAGCAGAGGGTGTAGAAAAACCTCCACTTGCAGATAGTTTTAGTGATGTTTATGATGTCGCTCCTTCTAATCTCCGTGAACAGGAGCAATGGCTGAAGGAGATTGTAAGAAAACAACCACAAGAGTATCCAACAAATATTTCTGTGTAG
Predicted protein sequences of Glyma.04g212100
>Glyma.04g212100.1.p sequence-type=predicted peptide transcript=Glyma.04g212100.1 locus=Glyma.04g212100 id=Glyma.04g212100.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MRKFTTIFSHIKSTKMNFSVSLLHRSSPFCPNQPPHPNFKNLTWQNRDSLLLFPLLCSRHFASTTAQNPSTLNALQDHYQAIDFPGGAVQFIPEMRFISESPKERIPCYRVLDDNGQPILGHNFVQVSKEVAVKMYTDMVTLRSMDTIFYEAQRQGRISFYVTAIGEEAINVASAAALAMDDVVFPQYREAGVLLWRGFTLQEFANQLFSNIYDYGKGRQMPAHYGSKKHNYFTVASTIATQISHAVGAAYSLKMDKKDACAVTYFGDGGSSEGDFHAALNFAAVLEAPVIFICRNNGWAISTPISDQFRSDGVVVKGQAYGVRSIRVDGNDALAIYSAIQAARQMAITEERPILIEALTYRVGHHTTSDDSTKYRPANEIEWWRVARDPVVRFRKWIEKHGWWNDMAESELINNLRQQLLHTIQEAEGVEKPPLADSFSDVYDVAPSNLREQEQWLKEIVRKQPQEYPTNISV*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo