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Report for Sequence Feature Glyma.04g200700

Feature Type:gene_model
Chromosome:Gm04
Start:46171765
stop:46174532
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.04g200700
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G25630.1AT ATFIB2,FIB2 JGI N/AIEA
3.6.4.13EC RNA helicase JGI N/AIEA
GO:0006364GO-bp rRNA processing JGI N/AIEA
GO:0008033GO-bp tRNA processing JGI N/AIEA
GO:0003723GO-mf RNA binding JGI N/AIEA
GO:0008168GO-mf methyltransferase activity JGI N/AIEA
K14563KEGG Ribosome biogenesis JGI N/AIEA
KOG1596 KOG Fibrillarin and related nucleolar RNA-binding proteins JGI N/AIEA
PTHR10335PantherFam RRNA 2-O-METHYLTRANSFERASE FIBRILLARIN JGI N/AIEA
PF01269Pfam Fibrillarin JGI N/AIEA

Proteins Associated with Glyma.04g200700
LocusGene SymbolProtein Name
MED36-1 Mediator Complex 36 gene 1

Gene model name correspondences to Glyma.04g200700 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma04g37770 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.04g200700
>Glyma.04g200700.1 sequence-type=CDS polypeptide=Glyma.04g200700.1.p locus=Glyma.04g200700 id=Glyma.04g200700.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCTCCTCCCAGAGGTGGTGGGTTCAGGGGTGGTAGGGGTGACAGAGGTAGAGGAAGGGGCGGTGGTGGAGGAAGAGGAGGAGACAGGGGCACGCCGTTCAAAGCTAGAGGCGGTGGCCGTGGAGGAGGCAGAGGCGGCGGTGGCCGTGGAGGAGGCAGGGGCGGCGGCCGAGGTGGAATGAAGGGAGGTAGCAAGGTTGTGGTGCAGCCTCATAGACATGATGGTATTTTCATTGCCAAGGGTAAAGAAGACGCTCTTGTTACCAAGAATCTTGTTCCTGGTGAAGCTGTTTACAATGAGAAAAGGATTACCGTTCAGAACGAAGACGGTTCCAAAGATGAGTACAGAGTTTGGAATCCTTTCCGCTCGAAGTTGGCTGCTGCCATCCTTGGTGGAGTTGACAACATTTGGATTAAACCTGGAGCCAGAGTCCTTTACCTAGGAGCTGCTTCTGGGACCACTGTTTCTCATGTGTCGGATGTGGTTGGGCCTACTGGAGTTGTCTATGCAGTAGAGTTTTCCCATAGAAGCGGACGTGACTTGGTCAATATGGCAAAGAAGCGAACTAATGTTATACCCATTATTGAAGATGCTAGACATCCAGCTAAGTACAGGATGTTGGTTGGAATGGTTGATGTCATATTTTCTGATGTTGCTCAGCCTGATCAGGCAAGGATTTTGGGGCTGAATGCTTCATATTATCTAAAAGCAGGGGGTCATTTTGTTATTTCAATCAAGGCTAACTGCATAGACTCCACAGTCCCGGCTGAGGCAGTGTTTGAAAGCGAAGTGAACAAGTTAAAGGCTGATCAATTCAAACCATTCGAGCAAGTCACCCTTGAACCATTTGAGAGGGACCATGCGTGCGTTGTTGGCGGATACAGAATGCCCAAGAAGAAAAAAGATGCTGCTGAGTAG
Predicted protein sequences of Glyma.04g200700
>Glyma.04g200700.1.p sequence-type=predicted peptide transcript=Glyma.04g200700.1 locus=Glyma.04g200700 id=Glyma.04g200700.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MAPPRGGGFRGGRGDRGRGRGGGGGRGGDRGTPFKARGGGRGGGRGGGGRGGGRGGGRGGMKGGSKVVVQPHRHDGIFIAKGKEDALVTKNLVPGEAVYNEKRITVQNEDGSKDEYRVWNPFRSKLAAAILGGVDNIWIKPGARVLYLGAASGTTVSHVSDVVGPTGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILGLNASYYLKAGGHFVISIKANCIDSTVPAEAVFESEVNKLKADQFKPFEQVTLEPFERDHACVVGGYRMPKKKKDAAE*






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