SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.04g197900

Feature Type:gene_model
Chromosome:Gm04
Start:45819212
stop:45826030
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.04g197900
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G48710.1AT JGI N/AIEA
K17046KEGG Chromosome and associated proteins JGI N/AIEA
KOG2266 KOG Chromatin-associated protein Dek and related proteins, contains SAP DNA binding domain JGI N/AIEA
PTHR13468PantherFam DEK PROTEIN JGI N/AIEA
PF08766Pfam DEK C terminal domain JGI N/AIEA

Gene model name correspondences to Glyma.04g197900 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma04g37460 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.04g197900
>Glyma.04g197900.1 sequence-type=CDS polypeptide=Glyma.04g197900.1.p locus=Glyma.04g197900 id=Glyma.04g197900.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCCACCGAAACCCTAGAAGACACCAAGCCTCCCCTCCAGGACGACGACCGTGCGAAATCGGAGATTCCCGAGAAAGACGCTTCCTCGGACGACGCCGCGGCAAAATCCCGGGACGCGAATGCCGGCGACAAAGACGGAGCATCTGACAATCAGGAAGTAGAAGAGAAAGACGCCGCTGAGGAGAAGAAAGAAGAGATCGACGAAGACGAAGAAGAAGAGGAAGACGAAGTGGAAGAGAAAGAGAAGGGTAAGGGTAAGAAGAGTAAGAAGGATCCAGTTACACCGGCGCCGAGTGAGAGGCCCACGAGGGAGAGGAAAACGGTGGAGCGCTTCTCTGTGCCCTCGCCGGCTAAGTCTGCAAGGTCCTCCGCTAGTAAAGGTTTGATAATTGAAAAGGGACGTGGCACGCAGCTCAAGGATATCCCAAACGTGGCTTTCAAGTTGTCAAAGAGAAAACCTGATGACAATCTGCATATGCTTCATACTTTACTGTTTGGAAAGAAAACAAAGGCACACAATTTAAAGAGAAATATAGGCCAGTTTTCTGGTTATGTGTGGACTGAAAATGAGGACAAACAGAGGGCCAAGGTAAAGGAAAGGATTGACAAATTTGTCAAAGAAAAGTTGTTGGACTTCTGTGATGTTCTTAATATTCAAATAAACAAGACCAATATGAAGAAGGAGGAGCTGTCAGCAAAGTTGTTGGAATTTTTGGAGTCCCCTCATGCTACAACTGATATTCTACTTGCTGATAAAGAACAGAAAGGTAAAAAGAGAACCAGAAAGTCAGTCCCTAGCAAATCTCCTGGGGAAGCATCTACAGAGACACCTGCCAAGAAGCAAAAACAAACTTCCCAATCTGGGAAAAAGCAAAAACCGTCTTCTGATGATGAGGAGGATGATAAAGCTGAACTTTCAGATGCAAAAGATGTTTCTCAGGAAGATGAAGATGTTGCAGTACCGAACAATGAAAGTGATGATGAAAGAAGTAAATCAGAGGAACAGAAAGAGAAATCAAAGTCTCACAAGCGTACTTCCAAAAAATCTGTTAAAGAGAATTCAGTTAGCAAAGCTGATAGAACCTCATCTGCCAAGAAGACCCCTGTTAAAGATGCCAAGAGCATTGAAAAAATTAAAAAAAAGACAACTTCAAAAAAGAGTGTTGCTGAGCATGACAGTGCTTCTGCCTCCGTTAAGTCAAAGCAACCTGCATCCAAGAAACAGAAAACTGTTAGTGAAAAGCAGGACACTAAGGGGAAAACTGCAAGCAAAAAACAAACTGACAAATCTTCAAAGGCTTTGGTTAAGGATCAAGGGAAAAGTAAAAGTAATAAGAAGGCCAAGGCAGAACCCACTAAGCAGGACATGCATGCTGTAGTTGTTGATATTCTGAAGGAAGTAGATTTCAATACTGCAACTTTATCCGATATCCTCAGGCAACTTGGTACCCACTTTGGTCTGGATTTAATGCATAGAAAAGCAGAGGTGAAGGATATAATTACAGATGTAATTAATAACATGTCTGATGAGGAAGATGAAGAAGCTGAGAATGATGGTGATGCAGATAAAGATGATGATGGTGATGATGATGATGATGATGCATGA

>Glyma.04g197900.2 sequence-type=CDS polypeptide=Glyma.04g197900.2.p locus=Glyma.04g197900 id=Glyma.04g197900.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCAAAAATTTCTGCCGTTGGTAAATTCACTCCATTGGCGTCGTATTACTTAGTGGCTTTCAAGTTGTCAAAGAGAAAACCTGATGACAATCTGCATATGCTTCATACTTTACTGTTTGGAAAGAAAACAAAGGCACACAATTTAAAGAGAAATATAGGCCAGTTTTCTGGTTATGTGTGGACTGAAAATGAGGACAAACAGAGGGCCAAGGTAAAGGAAAGGATTGACAAATTTGTCAAAGAAAAGTTGTTGGACTTCTGTGATGTTCTTAATATTCAAATAAACAAGACCAATATGAAGAAGGAGGAGCTGTCAGCAAAGTTGTTGGAATTTTTGGAGTCCCCTCATGCTACAACTGATATTCTACTTGCTGATAAAGAACAGAAAGGTAAAAAGAGAACCAGAAAGTCAGTCCCTAGCAAATCTCCTGGGGAAGCATCTACAGAGACACCTGCCAAGAAGCAAAAACAAACTTCCCAATCTGGGAAAAAGCAAAAACCGTCTTCTGATGATGAGGAGGATGATAAAGCTGAACTTTCAGATGCAAAAGATGTTTCTCAGGAAGATGAAGATGTTGCAGTACCGAACAATGAAAGTGATGATGAAAGAAGTAAATCAGAGGAACAGAAAGAGAAATCAAAGTCTCACAAGCGTACTTCCAAAAAATCTGTTAAAGAGAATTCAGTTAGCAAAGCTGATAGAACCTCATCTGCCAAGAAGACCCCTGTTAAAGATGCCAAGAGCATTGAAAAAATTAAAAAAAAGACAACTTCAAAAAAGAGTGTTGCTGAGCATGACAGTGCTTCTGCCTCCGTTAAGTCAAAGCAACCTGCATCCAAGAAACAGAAAACTGTTAGTGAAAAGCAGGACACTAAGGGGAAAACTGCAAGCAAAAAACAAACTGACAAATCTTCAAAGGCTTTGGTTAAGGATCAAGGGAAAAGTAAAAGTAATAAGAAGGCCAAGGCAGAACCCACTAAGCAGGACATGCATGCTGTAGTTGTTGATATTCTGAAGGAAGTAGATTTCAATACTGCAACTTTATCCGATATCCTCAGGCAACTTGGTACCCACTTTGGTCTGGATTTAATGCATAGAAAAGCAGAGGTGAAGGATATAATTACAGATGTAATTAATAACATGTCTGATGAGGAAGATGAAGAAGCTGAGAATGATGGTGATGCAGATAAAGATGATGATGGTGATGATGATGATGATGATGCATGA

>Glyma.04g197900.3 sequence-type=CDS polypeptide=Glyma.04g197900.3.p locus=Glyma.04g197900 id=Glyma.04g197900.3.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCCACCGAAACCCTAGAAGACACCAAGCCTCCCCTCCAGGACGACGACCGTGCGAAATCGGAGATTCCCGAGAAAGACGCTTCCTCGGACGACGCCGCGGCAAAATCCCGGGACGCGAATGCCGGCGACAAAGACGGAGCATCTGACAATCAGGAAGTAGAAGAGAAAGACGCCGCTGAGGAGAAGAAAGAAGAGATCGACGAAGACGAAGAAGAAGAGGAAGACGAAGTGGAAGAGAAAGAGAAGGGTAAGGGTAAGAAGAGTAAGAAGGATCCAGTTACACCGGCGCCGAGTGAGAGGCCCACGAGGGAGAGGAAAACGGTGGAGCGCTTCTCTGTGCCCTCGCCGGCTAAGTCTGCAAGGTCCTCCGCTAGTAAAGGTTTGATAATTGAAAAGGGACGTGGCACGCAGCTCAAGGATATCCCAAACGTGGCTTTCAAGTTGTCAAAGAGAAAACCTGATGACAATCTGCATATGCTTCATACTTTACTGTTTGGAAAGAAAACAAAGGCACACAATTTAAAGAGAAATATAGGCCAGTTTTCTGGTTATGTGTGGACTGAAAATGAGGACAAACAGAGGGCCAAGGTAAAGGAAAGGATTGACAAATTTGTCAAAGAAAAGTTGTTGGACTTCTGTGATGTTCTTAATATTCAAATAAACAAGACCAATATGAAGAAGGAGGAGCTGTCAGCAAAGTTGTTGGAATTTTTGGAGTCCCCTCATGCTACAACTGATATTCTACTTGCTGATAAAGAACAGAAAGGTAAAAAGAGAACCAGAAAGTCAGTCCCTAGCAAATCTCCTGGGGAAGCATCTACAGAGACACCTGCCAAGCAAAAACAAACTTCCCAATCTGGGAAAAAGCAAAAACCGTCTTCTGATGATGAGGAGGATGATAAAGCTGAACTTTCAGATGCAAAAGATGTTTCTCAGGAAGATGAAGATGTTGCAGTACCGAACAATGAAAGTGATGATGAAAGAAGTAAATCAGAGGAACAGAAAGAGAAATCAAAGTCTCACAAGCGTACTTCCAAAAAATCTGTTAAAGAGAATTCAGTTAGCAAAGCTGATAGAACCTCATCTGCCAAGAAGACCCCTGTTAAAGATGCCAAGAGCATTGAAAAAATTAAAAAAAAGACAACTTCAAAAAAGAGTGTTGCTGAGCATGACAGTGCTTCTGCCTCCGTTAAGTCAAAGCAACCTGCATCCAAGAAACAGAAAACTGTTAGTGAAAAGCAGGACACTAAGGGGAAAACTGCAAGCAAAAAACAAACTGACAAATCTTCAAAGGCTTTGGTTAAGGATCAAGGGAAAAGTAAAAGTAATAAGAAGGCCAAGGCAGAACCCACTAAGCAGGACATGCATGCTGTAGTTGTTGATATTCTGAAGGAAGTAGATTTCAATACTGCAACTTTATCCGATATCCTCAGGCAACTTGGTACCCACTTTGGTCTGGATTTAATGCATAGAAAAGCAGAGGTGAAGGATATAATTACAGATGTAATTAATAACATGTCTGATGAGGAAGATGAAGAAGCTGAGAATGATGGTGATGCAGATAAAGATGATGATGGTGATGATGATGATGATGATGCATGA

>Glyma.04g197900.4 sequence-type=CDS polypeptide=Glyma.04g197900.4.p locus=Glyma.04g197900 id=Glyma.04g197900.4.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCAAAAATTTCTGCCGTTGGTAAATTCACTCCATTGGCGTCGTATTACTTAGTGGCTTTCAAGTTGTCAAAGAGAAAACCTGATGACAATCTGCATATGCTTCATACTTTACTGTTTGGAAAGAAAACAAAGGCACACAATTTAAAGAGAAATATAGGCCAGTTTTCTGGTTATGTGTGGACTGAAAATGAGGACAAACAGAGGGCCAAGGTAAAGGAAAGGATTGACAAATTTGTCAAAGAAAAGTTGTTGGACTTCTGTGATGTTCTTAATATTCAAATAAACAAGACCAATATGAAGAAGGAGGAGCTGTCAGCAAAGTTGTTGGAATTTTTGGAGTCCCCTCATGCTACAACTGATATTCTACTTGCTGATAAAGAACAGAAAGGTAAAAAGAGAACCAGAAAGTCAGTCCCTAGCAAATCTCCTGGGGAAGCATCTACAGAGACACCTGCCAAGAAGCAAAAACAAACTTCCCAATCTGGGAAAAAGCAAAAACCGTCTTCTGATGATGAGGAGGATGATAAAGCTGAACTTTCAGATGCAAAAGATGTTTCTCAGGAAGATGAAGATGTTGCAGTACCGAACAATGAAAGTGATGATGAAAGAAGTAAATCAGAGGAACAGAAAGAGAAATCAAAGTCTCACAAGCGTACTTCCAAAAAATCTGTTAAAGAGAATTCAGTTAGCAAAGCTGATAGAACCTCATCTGCCAAGAAGACCCCTGTTAAAGATGCCAAGAGCATTGAAAAAATTAAAAAAAAGACAACTTCAAAAAAGAGTGTTGCTGAGCATGACAGTGCTTCTGCCTCCGTTAAGTCAAAGCAACCTGCATCCAAGAAACAGAAAACTGTTAGTGAAAAGCAGGACACTAAGGGGAAAACTGCAAGCAAAAAACAAACTGACAAATCTTCAAAGGCTTTGGTTAAGGATCAAGGGAAAAGTAAAAGTAATAAGAAGGCCAAGGCAGAACCCACTAAGCAGGACATGCATGCTGTAGTTGTTGATATTCTGAAGGAAGTAGATTTCAATACTGCAACTTTATCCGATATCCTCAGGCAACTTGGTACCCACTTTGGTCTGGATTTAATGCATAGAAAAGCAGAGGTGAAGGATATAATTACAGATGTAATTAATAACATGTCTGATGAGGAAGATGAAGAAGCTGAGAATGATGGTGATGCAGATAAAGATGATGATGGTGATGATGATGATGATGATGCATGA
Predicted protein sequences of Glyma.04g197900
>Glyma.04g197900.1.p sequence-type=predicted peptide transcript=Glyma.04g197900.1 locus=Glyma.04g197900 id=Glyma.04g197900.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MATETLEDTKPPLQDDDRAKSEIPEKDASSDDAAAKSRDANAGDKDGASDNQEVEEKDAAEEKKEEIDEDEEEEEDEVEEKEKGKGKKSKKDPVTPAPSERPTRERKTVERFSVPSPAKSARSSASKGLIIEKGRGTQLKDIPNVAFKLSKRKPDDNLHMLHTLLFGKKTKAHNLKRNIGQFSGYVWTENEDKQRAKVKERIDKFVKEKLLDFCDVLNIQINKTNMKKEELSAKLLEFLESPHATTDILLADKEQKGKKRTRKSVPSKSPGEASTETPAKKQKQTSQSGKKQKPSSDDEEDDKAELSDAKDVSQEDEDVAVPNNESDDERSKSEEQKEKSKSHKRTSKKSVKENSVSKADRTSSAKKTPVKDAKSIEKIKKKTTSKKSVAEHDSASASVKSKQPASKKQKTVSEKQDTKGKTASKKQTDKSSKALVKDQGKSKSNKKAKAEPTKQDMHAVVVDILKEVDFNTATLSDILRQLGTHFGLDLMHRKAEVKDIITDVINNMSDEEDEEAENDGDADKDDDGDDDDDDA*

>Glyma.04g197900.2.p sequence-type=predicted peptide transcript=Glyma.04g197900.2 locus=Glyma.04g197900 id=Glyma.04g197900.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MAKISAVGKFTPLASYYLVAFKLSKRKPDDNLHMLHTLLFGKKTKAHNLKRNIGQFSGYVWTENEDKQRAKVKERIDKFVKEKLLDFCDVLNIQINKTNMKKEELSAKLLEFLESPHATTDILLADKEQKGKKRTRKSVPSKSPGEASTETPAKKQKQTSQSGKKQKPSSDDEEDDKAELSDAKDVSQEDEDVAVPNNESDDERSKSEEQKEKSKSHKRTSKKSVKENSVSKADRTSSAKKTPVKDAKSIEKIKKKTTSKKSVAEHDSASASVKSKQPASKKQKTVSEKQDTKGKTASKKQTDKSSKALVKDQGKSKSNKKAKAEPTKQDMHAVVVDILKEVDFNTATLSDILRQLGTHFGLDLMHRKAEVKDIITDVINNMSDEEDEEAENDGDADKDDDGDDDDDDA*

>Glyma.04g197900.3.p sequence-type=predicted peptide transcript=Glyma.04g197900.3 locus=Glyma.04g197900 id=Glyma.04g197900.3.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MATETLEDTKPPLQDDDRAKSEIPEKDASSDDAAAKSRDANAGDKDGASDNQEVEEKDAAEEKKEEIDEDEEEEEDEVEEKEKGKGKKSKKDPVTPAPSERPTRERKTVERFSVPSPAKSARSSASKGLIIEKGRGTQLKDIPNVAFKLSKRKPDDNLHMLHTLLFGKKTKAHNLKRNIGQFSGYVWTENEDKQRAKVKERIDKFVKEKLLDFCDVLNIQINKTNMKKEELSAKLLEFLESPHATTDILLADKEQKGKKRTRKSVPSKSPGEASTETPAKQKQTSQSGKKQKPSSDDEEDDKAELSDAKDVSQEDEDVAVPNNESDDERSKSEEQKEKSKSHKRTSKKSVKENSVSKADRTSSAKKTPVKDAKSIEKIKKKTTSKKSVAEHDSASASVKSKQPASKKQKTVSEKQDTKGKTASKKQTDKSSKALVKDQGKSKSNKKAKAEPTKQDMHAVVVDILKEVDFNTATLSDILRQLGTHFGLDLMHRKAEVKDIITDVINNMSDEEDEEAENDGDADKDDDGDDDDDDA*

>Glyma.04g197900.4.p sequence-type=predicted peptide transcript=Glyma.04g197900.4 locus=Glyma.04g197900 id=Glyma.04g197900.4.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MAKISAVGKFTPLASYYLVAFKLSKRKPDDNLHMLHTLLFGKKTKAHNLKRNIGQFSGYVWTENEDKQRAKVKERIDKFVKEKLLDFCDVLNIQINKTNMKKEELSAKLLEFLESPHATTDILLADKEQKGKKRTRKSVPSKSPGEASTETPAKKQKQTSQSGKKQKPSSDDEEDDKAELSDAKDVSQEDEDVAVPNNESDDERSKSEEQKEKSKSHKRTSKKSVKENSVSKADRTSSAKKTPVKDAKSIEKIKKKTTSKKSVAEHDSASASVKSKQPASKKQKTVSEKQDTKGKTASKKQTDKSSKALVKDQGKSKSNKKAKAEPTKQDMHAVVVDILKEVDFNTATLSDILRQLGTHFGLDLMHRKAEVKDIITDVINNMSDEEDEEAENDGDADKDDDGDDDDDDA*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo