Report for Sequence Feature Glyma.04g193500
| Feature Type: | gene_model |
| Chromosome: | Gm04 |
| Start: | 45330782 |
| stop: | 45333828 |
| Source: | JGI |
| Version: | Wm82.a4.v1 |
| High confidence: | yes |
| 
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Annotations for Glyma.04g193500
| Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
|---|
| AT3G04120.1 | AT |
GAPC,GAPC-1,GAPC1 |
JGI | N/A | IEA |
| 1.2.1.12 | EC |
glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) |
JGI | N/A | IEA |
| GO:0055114 | GO-bp |
obsolete oxidation-reduction process |
JGI | N/A | IEA |
| GO:0016620 | GO-mf |
oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor |
JGI | N/A | IEA |
| K00134 | KEGG |
Exosome |
JGI | N/A | IEA |
| KOG0657 |
KOG |
Glyceraldehyde 3-phosphate dehydrogenase |
JGI | N/A | IEA |
| PTHR10836 | PantherFam |
GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE |
JGI | N/A | IEA |
| PF00044 | Pfam |
Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain |
JGI | N/A | IEA |
| PF02800 | Pfam |
Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain |
JGI | N/A | IEA |
Proteins Associated with Glyma.04g193500
| Locus | Gene Symbol | Protein Name |
|---|
| | GAPDH | glyceraldehyde 3-phosphate dehydrogenase |
Gene model name correspondences to Glyma.04g193500 Gene Call Version Wm82.a4.v1
| Corresponding Name | Annotation Version | Evidence | Comments |
|---|
| Glyma04g36870 | Wm82.a1.v1.1 | IGC | As supplied by JGI |
Coding sequences of Glyma.04g193500
>Glyma.04g193500.1 sequence-type=CDS polypeptide=Glyma.04g193500.1.p locus=Glyma.04g193500 id=Glyma.04g193500.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGGCAAGGTCAAGATCGGAATCAACGGATTTGGAAGAATTGGCCGTTTGGTGGCCAGGGTGGCTCTGCAGAGAGACGATGTTGAACTCGTTGCCGTTAACGATCCTTTCATTACCACCGATTACATGACATACATGTTTAAATACGACAGTGTTCACGGGCACTGGAAGCATCACGATGTCACCGTTAAGGATGAGAAGACCCTTCTCTTCGGTGACAAGCCAGTCACTGTTTTTGGACACAGGAACCCTGAAGAGATCCCATGGAAGTCGACTGGAGCTGACATCATTGTTGAGTCCACCGGAGTTTTCACCGATAAGGATAAGGCTGCCGCACATTTGAAGGGTGGTGCAAAGAAGGTTATTATTTCTGCCCCCAGTAAGGATGCCCCCATGTTTGTTGTTGGTGTTAACGAGCACGAGTACAAGCCAGAGCTTGACATTATTTCCAATGCTAGCTGCACAACCAACTGCCTTGCCCCGCTCGCCAAGGTTATCAATGACAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACTGCTACCCAGAAGACTGTTGATGGGCCATCAGCCAAAGACTGGAGAGGTGGAAGAGCTGCTTCATTTAACATCATTCCTAGCAGCACTGGAGCTGCCAAGGCTGTTGGAAAAGTCCTCCCTGCTTTGAATGGAAAATTGACTGGTATGGCATTCCGTGTTCCCACTGTGGATGTCTCTGTTGTTGACCTCACAGTGAGGCTGGAGAAGGAAGCCTCCTACGATGAAATTAAAAATGCTATCAAGGAGGAATCAGAGGGCAAGTTGAAGGGAATTCTTGGTTACACTGAAGATGATGTGGTCTCCACCGACTTTGTGGGCGATAGCAGATCAAGTATTTTTGATGCAAAGGCTGGAATTGCATTGAATAAGAACTTTGTGAAGCTTGTTTCTTGGTACGACAACGAGTGGGGATACAGCTCACGTGTCATTGACCTGCTTGTATTCGTTGCCAAGAAGTCTTTTTAA
>Glyma.04g193500.2 sequence-type=CDS polypeptide=Glyma.04g193500.2.p locus=Glyma.04g193500 id=Glyma.04g193500.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGACATACATGTTTAAATACGACAGTGTTCACGGGCACTGGAAGCATCACGATGTCACCGTTAAGGATGAGAAGACCCTTCTCTTCGGTGACAAGCCAGTCACTGTTTTTGGACACAGGAACCCTGAAGAGATCCCATGGAAGTCGACTGGAGCTGACATCATTGTTGAGTCCACCGGAGTTTTCACCGATAAGGATAAGGCTGCCGCACATTTGAAGGGTGGTGCAAAGAAGGTTATTATTTCTGCCCCCAGTAAGGATGCCCCCATGTTTGTTGTTGGTGTTAACGAGCACGAGTACAAGCCAGAGCTTGACATTATTTCCAATGCTAGCTGCACAACCAACTGCCTTGCCCCGCTCGCCAAGGTTATCAATGACAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACTGCTACCCAGAAGACTGTTGATGGGCCATCAGCCAAAGACTGGAGAGGTGGAAGAGCTGCTTCATTTAACATCATTCCTAGCAGCACTGGAGCTGCCAAGGCTGTTGGAAAAGTCCTCCCTGCTTTGAATGGAAAATTGACTGGTATGGCATTCCGTGTTCCCACTGTGGATGTCTCTGTTGTTGACCTCACAGTGAGGCTGGAGAAGGAAGCCTCCTACGATGAAATTAAAAATGCTATCAAGGAGGAATCAGAGGGCAAGTTGAAGGGAATTCTTGGTTACACTGAAGATGATGTGGTCTCCACCGACTTTGTGGGCGATAGCAGATCAAGTATTTTTGATGCAAAGGCTGGAATTGCATTGAATAAGAACTTTGTGAAGCTTGTTTCTTGGTACGACAACGAGTGGGGATACAGCTCACGTGTCATTGACCTGCTTGTATTCGTTGCCAAGAAGTCTTTTTAA
Predicted protein sequences of Glyma.04g193500
>Glyma.04g193500.1.p sequence-type=predicted peptide transcript=Glyma.04g193500.1 locus=Glyma.04g193500 id=Glyma.04g193500.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MGKVKIGINGFGRIGRLVARVALQRDDVELVAVNDPFITTDYMTYMFKYDSVHGHWKHHDVTVKDEKTLLFGDKPVTVFGHRNPEEIPWKSTGADIIVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNEHEYKPELDIISNASCTTNCLAPLAKVINDRFGIVEGLMTTVHSITATQKTVDGPSAKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVDVSVVDLTVRLEKEASYDEIKNAIKEESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALNKNFVKLVSWYDNEWGYSSRVIDLLVFVAKKSF*
>Glyma.04g193500.2.p sequence-type=predicted peptide transcript=Glyma.04g193500.2 locus=Glyma.04g193500 id=Glyma.04g193500.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MTYMFKYDSVHGHWKHHDVTVKDEKTLLFGDKPVTVFGHRNPEEIPWKSTGADIIVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNEHEYKPELDIISNASCTTNCLAPLAKVINDRFGIVEGLMTTVHSITATQKTVDGPSAKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVDVSVVDLTVRLEKEASYDEIKNAIKEESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALNKNFVKLVSWYDNEWGYSSRVIDLLVFVAKKSF*
SoyBase
SoyBase transitions to NEW site on 10/1/2024
