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Report for Sequence Feature Glyma.04g191900

Feature Type:gene_model
Chromosome:Gm04
Start:46271697
stop:46281894
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.04g191900
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G48430.1AT relative of early flowering 6 JGI N/AIEA
GO:0005634GO-cc nucleus EnsemblGenomesN/AIEA
GO:0003676GO-mf nucleic acid binding EnsemblGenomesN/AIEA
GO:0005515GO-mf protein binding JGI N/AIEA
GO:0046872GO-mf metal ion binding EnsemblGenomesN/AIEA
GO:0046872GO-mf metal ion binding JGI N/AIEA
PTHR10694Panther JUMONJI DOMAIN CONTAINING PROTEIN JGI N/AIEA
PTHR10694:SF8Panther LYSINE-SPECIFIC DEMETHYLASE LID JGI N/AIEA
PF02373PFAM JmjC domain, hydroxylase JGI N/AIEA
PF02375PFAM jmjN domain JGI N/AIEA

Expression Patterns of Glyma.04g191900
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.04g191900 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma04g36620 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.04g191900
>Glyma.04g191900.1 sequence-type=CDS polypeptide=Glyma.04g191900.1.p locus=Glyma.04g191900 ID=Glyma.04g191900.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGTGGGAGTTTGTGAGGGAAACGGCGAGGTTTTGTCATGGCTGAAATCGATGCCGGTGGCGCCGGAGTACAGGCCGAGCGCGGCCGAGTTCCAGGATCCAATCGGGTACATATTCAAGATCGAGAAGGAAGCTTCAAAGTACGGAATCTGCAAAATCATCCCTCCCTTCCCACCTTCTTCCAGGAAAACCGCAATCGCCAACCTCAACCGCTCACTCGCGGAAGCCGGCTCCACATTCACCACGCGCCAGCAGCAGATCGGGTTCTGCCCCCGCAGGCCCAGGCCCGTCCAGCGTCCCGTCTGGCAGAGCGGCGATCGCTACACCTTCAGCGAGTTCGAGTCCAAAGCCAAGTCCTTCGAGAAGACATACCTCAAACGCCACTCCAAGAAGGGCTCCGGCTCCGGCTCGGGCCTGGGCCCGCTGGAGACGGAGACCCTGTTCTGGAAGGCCACGCTGGACAAACCCTTCTCCGTGGAATACGCTAATGACATGCCTGGCTCGGCGTTTTCCCCGAAATGCCGGCACGCAGGGGATCCCAGCTCACTGGCGGATACTCCGTGGAACATGAGAGCGGTTTCGAGGGCCAAAGGTTCGCTCTTACAGTTCATGAAAGAGGAGATTCCGGGCGTTACTTCCCCTATGGTCTATGTTGCCATGCTCTTCAGCTGGTTCGCGTGGCACGTCGAGGACCACGACTTGCACAGCTTGAATTACCTCCACATGGGCGCCGGCAAGACCTGGTACGGCGTCCCCCGCGACGCCGCCGTCGCTTTCGAGGAAGTCGTTAGGGTTCACGGCTACGGCGGGGAGATCAACCCGCTCGTTACTTTTGCTACTCTTGGTGAGAAAACCACAGTGATGTCGCCTGAAGTATTTATTAGTGCAGGTGTTCCATGCTGCAGGTTAGTACAAAATGCTGGGGAATTTGTGGTGACGTTTCCCAGAGCCTATCACTCAGGGTTTAGTCATGGTTTTAATTGCGGAGAGGCAGCAAACATTGCAACACCGGAGTGGTTGAGGTTTGCTAAAGATGCTGCTATTCGGAGGGCTTCATTAAATTATCCTCCCATGGTTTCACATTTCCAGTTACTTTATGACCTTGCCTTAGCTTTATGTTCTAGTATTCCTGCGAGCATCAGTGCTGAACCTCGTAGTTCTCGTCTTAAAGATAAGAAGAAGGGTGAAGGAGAAACTGTAATTAAAGAACTATTTGTCCAAGATGTGTTACAAAACAATGATCTGCTTCATATACTTGGGAAAGGATCAGATGTAGTACTTCTTCCTCATAGCTCAGTTGACATTTTTGTTTGCCCAAAATTACGTGTTGGATTCCAACAATCCATCAATGTAAGAAATTCTGAGGGAATGCATTCCTCTAAAGGTTTTGTTTCAGATGATGTGGTATTCAGCAGGAGTCAAGGAATCAAGCAAGAAAAAAGTTTCTATTCTGTGAAAGACAACTTTACTACATTGTTTGAAAGGAACAGGATTTCCTCTTTTGATGTAAATGGTAACATAAGGGCTTCAAGTTCTAATCCACTTCAAAGAGACAATGATAGAGAAACTGGTCAAGGAGATTCGTTATCAGATCAGAGACTGTTTTCATGTGTAACATGTGGAATACTATGCTTTTCCTGTGTTGCTATTGTACAGCCTAGAGAACCAGCAGCTAGATATCTTATGTCAGCTGATTGCAGCTTCTTTAATGATTGGGTTGTTGGCTCTGGAGTATCTAGCAATAAATTTACTATTGCCCTTGAAGAAGCAACTATTGCTGAGCCAAACATGTATACAGGATGGATGAAAAAAAATGTCCAAGATGGTATACATGATGTTTCTGTTCAATCTTCTCGGGAGGCTTTAAATACTGAAAGTGAAAATGGCAATACAGCTCTTGCATTATTGGCTTCAGCATATGGAAATTCATCTGACTCTGAGGAAGATCAGATTGCAGATGAGAGTCACGAATCAAATGTGATAAACTCTGCTTCGGAATGTTTACTTTCTCATACTCAAGATTCCTATGCTAGTCCCATGACTGCACTTGACAAAGGAGATGATTTTCCTTCAACGAGTGCCAGTTGTGAGGATGTGCATCGTAGATTTGAGTGTAATTTGAGTCATCAGTCTTTAGACCACTCTTTAAAGAAACAGGATTATAATATCACATCAGGGGTTACATTTGAAAATACAAGGACAGTGCCTAATTCCACCTCTAATTGTTCCCAACAAGCTCATAATGCTGACAGGTCATTGTCTAACAAGTCTATGGTTGCCTTTGATAATAAAAATACTTCGATGGTGCTACAAGCTGATGAAGACTCATCCAGAATGCATGTTTTTTGTCTAGAGCATGCTGCAGAAGCAGAACAGCAACTTCGCCCAATAGGTGGAGCCCACATATTGCTCCTTTGTCATCCAGACTATCCCAAGATAGAGGCTGAAGCAAAAATGGTGGCAGAAGATCTGGGGATTGATTACATGTGGAAGAAAATTGCGTACAGGCACGCTTCCACGGAGGATGAGGAGAGGATCCAGTCGGCTCTGGACAATGAGGAAGCTATTCCTGGGAATGGTGACTGGGCTGTAAAGCTGGGAATCAATCTCTTTTATAGTGCAAATCTTAGCCGCTCTCCTCTTTATAGTAAGCAAATGCCTTACAATTCTGTTATATACTATTCATTTGGTTGTAGCTCTCCAGCAAGCTCACCTGTAGAACCAAAGGTATACCAAAGAAGGGTCAACAGGCAGAAAAAGGTTGTTGCTGGGAAATGGTGTGGCAAAGTTTGGATGTCCAATCAGGTCCATCCCCTTTTAGCAAAAAGAGACTCCGAAGATGTTGAGGATGAGAAACTCTTACTTGGGTGGATATTACCTGATGAGAAATTGGAGAGATCAGAAATTACCCTCAAAAGTGAAACTACTAGCAGAAAATCAGGTAAGAAAAGGAAAATGACAGCTGAGAATGGACGACCCAAGAAAGGAAGTTATGCTAAGAAAAATGTAGTTGCAGATAATTCCACTGAAGGTAAACACAACTCACAGCCAAGGAGGATTCTTAGAAATAAGAAAGCTAGGTGTGTTGAAAGAGACCATGCTGCTTTGAAAGGGGATTATTGTCCCCCATATCATCGGAAATCTATAAGCAAGCAAGCAAACTGCTCTGAAAGTGATGCAGTTTCTGATGATTCTCTTGATGATGATGATCACATGCATCATAGGAGGAATGCTATTGTTGAAAAAGACAAATTTATTGACAATGATGTTTCAAACGATACAGTGGACTGTGATTCTGACTGGCAGCAGAGGGAAGAACTTAGCAGCAAGAAAGTTGAAGATACAGAGAGAGATGCAATTTCAGAGGATTCTTTGGATGTTGGTTCTCTTCAGTTGCTTAGGAAGAATTCCAGAGCCAAGCATGCCAAAAACATAAGTCAAGAAGATATAATTTCTGATGACCAAATGGAGAGTCCTTTGCAAAAGCGGCAAAGGAGAATTCCTAAAAGCAGGCAGGGCAAATACCTTACTGGAAAAGATATAATATCTGATGACCAACTAGAGCATAAAAAGAAGAAGCAGCAACGGAAGAATCCTAAAAGCAGGCAAGCCAAATACCTCAATGAAGAGGATATTGCATCAGATGACCAATTGGAGGGCCATTATCGTAGATATCAGAGAAAGAATTCTAGAGGAAGACATGCCAAATGTGTAGCAGGGGAAGATGGCATGCCTGATGACCAATTGGAGGATCGTTGTCAGAAGCAGCAAACAAGTTTCTCTAGGAAAAGGCAAAACAAAGGCATTGATAGAGAGGTTAAAAATGAAATATCTGATGACCACTTGGAGGACCATTTTCTGAAGCAGCAAAGAAGATTTCCTAAGAGCAGGCAAAACAAACACACTGATAAAGAAGTCATGGATGACTTAGCTGAGAATAATTCTCATCTGCTGCATAGAACTCCCAAAAGGAAGCAAGCTAAATGCATGGAAGAAGATGATATGAATTCAGATGATGAAATGGAAGATAATCAGCCGCTGAGGAGAACACTTCGAAGTAAACAAGCTAAACCAAAGACACTTCAACAGATGAAACAAGCTAATTCCTTCCAAGCGAAAAAGCAGGCATCTCGGCCCATAAAACAGGGATCTCGGATGCTTGTGAAATCAAAGGCTCCTCAGCAAATAAAACAGCCTTCTCATTTGCGGAATAAGCAATCTAATAACACCCAGGAATTTAGTTTAGATATGGAAGAGGAGGAAGAAGGTGGACCTAGCACACGCCTTAGGAAGAGAGCCACAAAAGCTCAGGAATCTGAGGGAAAATTGAAAGACAAGCAAACAAAAAGGATGAAGGTGAAGAATGCTGCAGCTGCAAAGGTTTCGGTTGGCGATGCCAGAATGCAGGATGGGGAAGCAGAATATCAGTGTGATATTGATGGGTGCACTATGAGTTTTGGGTCAAAACAGGAGCTGATGCATCATAAGAGAAACATCTGCCCTGTAAAAGGGTGTGGGAAGAAGTTTTTTTCACACAAGTATCTGGTGCAGCATCGTCGAGTTCATGAGGATGAGCGCCCCTTGAAGTGCCCTTGGAAGGGATGCAAGATGACTTTCAAGTGGGCATGGGCTCGTACAGAGCACATTCGGGTCCACACTGGTGCACGACCTTATGTATGTGCTGAGCCAGATTGTGGACAAACATTCAGATTTGTTTCTGATTTCCGTCGTCATAAGCGAAAGACTGGTCATTCAGCAAAGAAGAATTGTCAATAG
Predicted protein sequences of Glyma.04g191900
>Glyma.04g191900.1.p sequence-type=predicted peptide transcript=Glyma.04g191900.1 locus=Glyma.04g191900 ID=Glyma.04g191900.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MVGVCEGNGEVLSWLKSMPVAPEYRPSAAEFQDPIGYIFKIEKEASKYGICKIIPPFPPSSRKTAIANLNRSLAEAGSTFTTRQQQIGFCPRRPRPVQRPVWQSGDRYTFSEFESKAKSFEKTYLKRHSKKGSGSGSGLGPLETETLFWKATLDKPFSVEYANDMPGSAFSPKCRHAGDPSSLADTPWNMRAVSRAKGSLLQFMKEEIPGVTSPMVYVAMLFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPRDAAVAFEEVVRVHGYGGEINPLVTFATLGEKTTVMSPEVFISAGVPCCRLVQNAGEFVVTFPRAYHSGFSHGFNCGEAANIATPEWLRFAKDAAIRRASLNYPPMVSHFQLLYDLALALCSSIPASISAEPRSSRLKDKKKGEGETVIKELFVQDVLQNNDLLHILGKGSDVVLLPHSSVDIFVCPKLRVGFQQSINVRNSEGMHSSKGFVSDDVVFSRSQGIKQEKSFYSVKDNFTTLFERNRISSFDVNGNIRASSSNPLQRDNDRETGQGDSLSDQRLFSCVTCGILCFSCVAIVQPREPAARYLMSADCSFFNDWVVGSGVSSNKFTIALEEATIAEPNMYTGWMKKNVQDGIHDVSVQSSREALNTESENGNTALALLASAYGNSSDSEEDQIADESHESNVINSASECLLSHTQDSYASPMTALDKGDDFPSTSASCEDVHRRFECNLSHQSLDHSLKKQDYNITSGVTFENTRTVPNSTSNCSQQAHNADRSLSNKSMVAFDNKNTSMVLQADEDSSRMHVFCLEHAAEAEQQLRPIGGAHILLLCHPDYPKIEAEAKMVAEDLGIDYMWKKIAYRHASTEDEERIQSALDNEEAIPGNGDWAVKLGINLFYSANLSRSPLYSKQMPYNSVIYYSFGCSSPASSPVEPKVYQRRVNRQKKVVAGKWCGKVWMSNQVHPLLAKRDSEDVEDEKLLLGWILPDEKLERSEITLKSETTSRKSGKKRKMTAENGRPKKGSYAKKNVVADNSTEGKHNSQPRRILRNKKARCVERDHAALKGDYCPPYHRKSISKQANCSESDAVSDDSLDDDDHMHHRRNAIVEKDKFIDNDVSNDTVDCDSDWQQREELSSKKVEDTERDAISEDSLDVGSLQLLRKNSRAKHAKNISQEDIISDDQMESPLQKRQRRIPKSRQGKYLTGKDIISDDQLEHKKKKQQRKNPKSRQAKYLNEEDIASDDQLEGHYRRYQRKNSRGRHAKCVAGEDGMPDDQLEDRCQKQQTSFSRKRQNKGIDREVKNEISDDHLEDHFLKQQRRFPKSRQNKHTDKEVMDDLAENNSHLLHRTPKRKQAKCMEEDDMNSDDEMEDNQPLRRTLRSKQAKPKTLQQMKQANSFQAKKQASRPIKQGSRMLVKSKAPQQIKQPSHLRNKQSNNTQEFSLDMEEEEEGGPSTRLRKRATKAQESEGKLKDKQTKRMKVKNAAAAKVSVGDARMQDGEAEYQCDIDGCTMSFGSKQELMHHKRNICPVKGCGKKFFSHKYLVQHRRVHEDERPLKCPWKGCKMTFKWAWARTEHIRVHTGARPYVCAEPDCGQTFRFVSDFRRHKRKTGHSAKKNCQ*






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