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Report for Sequence Feature Glyma.04g189200

Feature Type:gene_model
Chromosome:Gm04
Start:44840859
stop:44842944
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.04g189200
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G45590.1AT ATSEN1,SEN1 JGI N/AIEA
4.6.1.16EC tRNA-intron lyase JGI N/AIEA
GO:0006388GO-bp tRNA splicing, via endonucleolytic cleavage and ligation JGI N/AIEA
GO:0000213GO-mf tRNA-intron endonuclease activity JGI N/AIEA
K15322KEGG Transfer RNA biogenesis JGI N/AIEA
KOG4685 KOG tRNA splicing endonuclease SEN2 JGI N/AIEA
PTHR21227PantherFam TRNA-SPLICING ENDONUCLEASE SUBUNIT SEN2 JGI N/AIEA
PTHR21227:SF0PantherFam TRNA-SPLICING ENDONUCLEASE SUBUNIT SEN2 JGI N/AIEA
PF01974Pfam tRNA intron endonuclease, catalytic C-terminal domain JGI N/AIEA
PF02778Pfam tRNA intron endonuclease, N-terminal domain JGI N/AIEA

Gene model name correspondences to Glyma.04g189200 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma04g36310 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.04g189200
>Glyma.04g189200.1 sequence-type=CDS polypeptide=Glyma.04g189200.1.p locus=Glyma.04g189200 id=Glyma.04g189200.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCACCAAGATGGAAAGGAAAAGATGCAAAAGCTAAAAAGGATGCACAAGCTGAAGCACTCAAGGAACCCATGTCAAAGATTGTATCTCAAATTCAGTCTTCTCTAGTTCAATCAGATACTCGTGGATTTCTCTCTGGTAGTAGTGTACACTTAGTAGTGGAAGCAGAACAACTTCATTTGCTCGATAAAGCATGTTTTGGCTCACCTGTGAGAACAGTTGAAAAGGACAAACCCCGGTTTCAATTAAGCTTTGAGGAGGCATTCTACCTATGCTATTCCTTGAAATGCCTTAAGATTAATAATGACAGTGATGATACTAGTTCCCAAACCGATGAAGAGCTGTGGCATTACATGAAGTCAAAGAAAGAAACATTCCCCTGTTTCTACAAGGCTTATTCCCACCTGAGAATGAAAAACTGGGTAGTGAGGTCAGGAGCTCAGTATGGTGCAGATTTCGTTGTCTATCGTCACCATCCAGCTCGGGTCCATTCGGAGTATGGTGTGCTTGTTTTATCAGATGAGGAAGATAAAGATCTAAATGGAAGGTTGAGAGTATGGTCTGATGTTCATTGCACAACTCGACTTCTTGGAGGCGTTGCAAAAATCTTATTGGTTTTGTATGTCAATAGAAATGGTGGCAGCAATGAGTCTCCATTATGTTTGGCAAACTACACCGTTGAAGAGCGCACAATCACCAGATGGAATCCAGAACAATGCCGCGAAAAGATGGTAGTTCATGCTAATTCTGATAACGGAACTGGGTAA
Predicted protein sequences of Glyma.04g189200
>Glyma.04g189200.1.p sequence-type=predicted peptide transcript=Glyma.04g189200.1 locus=Glyma.04g189200 id=Glyma.04g189200.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MAPRWKGKDAKAKKDAQAEALKEPMSKIVSQIQSSLVQSDTRGFLSGSSVHLVVEAEQLHLLDKACFGSPVRTVEKDKPRFQLSFEEAFYLCYSLKCLKINNDSDDTSSQTDEELWHYMKSKKETFPCFYKAYSHLRMKNWVVRSGAQYGADFVVYRHHPARVHSEYGVLVLSDEEDKDLNGRLRVWSDVHCTTRLLGGVAKILLVLYVNRNGGSNESPLCLANYTVEERTITRWNPEQCREKMVVHANSDNGTG*






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