SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.04g187700

Feature Type:gene_model
Chromosome:Gm04
Start:44674475
stop:44677167
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.04g187700
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G48240.1AT JGI N/AIEA
GO:0005515GO-mf protein binding JGI N/AIEA
PTHR31066PantherFam OS05G0427100 PROTEIN-RELATED JGI N/AIEA
PF00564Pfam PB1 domain JGI N/AIEA

Gene model name correspondences to Glyma.04g187700 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma04g36160 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.04g187700
>Glyma.04g187700.1 sequence-type=CDS polypeptide=Glyma.04g187700.1.p locus=Glyma.04g187700 id=Glyma.04g187700.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGAATCCAAACCCGCTCAAACTATCAAGCTTCTCTGTAGCTACGGCGGCAAGATTCTCCCACGCGCCACCGACGGCGAACTCCGTTACGTCGGCGGCCACACCAGAGTCCTCACCGTCGACCGTTCCATTTCCTTTCCAGAATTGATGGTGAAGCTACGCGTATTTTGTGGTTCGTCTGTGATCTTGCGGTGTCAATTACCCAAGGGAGACTTGGAGACCTTGATATCCATCACCAACGACGAAGATCTCGCTAGCATAATCGAAGAATACGACCGTTCCTCGTTGAAATTGGCGCATCCGTTGAAGATCAAAGCCGTTCTCTCGCCGCCGAAATCGATGAAGAAAGCTTCGCCTGTTCCATCGTCGGCGTCGGCGTCGTCCAGCGCCACACACTCTCCGTCCGGATCGCCGCACACCTCCACCGAATCGCTGCCGTACGCGGCGTTCCACCGCATCGGCCGCCACAACCGCCCGCCGGTTGTGTATGCTATCGGCGCGGCGAAGGCATGTTGCTACACGCAGTTCGATGGGAGCCCTAGGTTCCTGTACCGTGGACCTCACTGCAATTATTACTGCCACTGA

>Glyma.04g187700.2 sequence-type=CDS polypeptide=Glyma.04g187700.2.p locus=Glyma.04g187700 id=Glyma.04g187700.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGAATCCAAACCCGCTCAAACTATCAAGCTTCTCTGTAGCTACGGCGGCAAGATTCTCCCACGCGCCACCGACGGCGAACTCCGTTACGTCGGCGGCCACACCAGAGTCCTCACCGTCGACCGTTCCATTTCCTTTCCAGAATTGATGGTGAAGCTACGCGTATTTTGTGGTTCGTCTGTGATCTTGCGGTGTCAATTACCCAAGGGAGACTTGGAGACCTTGATATCCATCACCAACGACGAAGATCTCGCTAGCATAATCGAAGAATACGACCGTTCCTCGTTGAAATTGGCGCATCCGTTGAAGATCAAAGCCGTTCTCTCGCCGCCGAAATCGATGAAGAAAGCTTCGCCTGTTCCATCGTCGGCGTCGGCGTCGTCCAGCGCCACACACTCTCCGTCCGGATCGCCGCACACCTCCACCGAATCGCTGCCGTACGCGGCGTTCCACCGCATCGGCCGCCACAACCGCCCGCCGGTTGTGTATGCTATCGGCGCGGCGAAGGCATGTTGCTACACGCAGTTCGATGGGAGCCCTAGGTTCCTGTACCGTGGACCTCACTGCAATTATTACTGCCACTGA

>Glyma.04g187700.3 sequence-type=CDS polypeptide=Glyma.04g187700.3.p locus=Glyma.04g187700 id=Glyma.04g187700.3.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGAATCCAAACCCGCTCAAACTATCAAGCTTCTCTGTAGCTACGGCGGCAAGATTCTCCCACGCGCCACCGACGGCGAACTCCGTTACGTCGGCGGCCACACCAGAGTCCTCACCGTCGACCGTTCCATTTCCTTTCCAGGTTCATTCCTTTTTCCCTTAGCCTTCGTTTTGCGTTTTTTTTATCTTCCTCTGTTTCATGAATTTGACGATTCGTTGCTTCGTTGTGCAGAATTGATGGTGAAGCTACGCGTATTTTGTGGTTCGTCTGTGATCTTGCGGTGTCAATTACCCAAGGGAGACTTGGAGACCTTGATATCCATCACCAACGACGAAGATCTCGCTAGCATAATCGAAGAATACGACCGTTCCTCGTTGAAATTGGCGCATCCGTTGAAGATCAAAGCCGTTCTCTCGCCGCCGAAATCGATGAAGAAAGCTTCGCCTGTTCCATCGTCGGCGTCGGCGTCGTCCAGCGCCACACACTCTCCGTCCGGATCGCCGCACACCTCCACCGAATCGCTGCCGTACGCGGCGTTCCACCGCATCGGCCGCCACAACCGCCCGCCGGTTGTGTATGCTATCGGCGCGGCGAAGGCATGTTGCTACACGCAGTTCGATGGGAGCCCTAGGTTCCTGTACCGTGGACCTCACTGCAATTATTACTGCCACTGA
Predicted protein sequences of Glyma.04g187700
>Glyma.04g187700.1.p sequence-type=predicted peptide transcript=Glyma.04g187700.1 locus=Glyma.04g187700 id=Glyma.04g187700.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MESKPAQTIKLLCSYGGKILPRATDGELRYVGGHTRVLTVDRSISFPELMVKLRVFCGSSVILRCQLPKGDLETLISITNDEDLASIIEEYDRSSLKLAHPLKIKAVLSPPKSMKKASPVPSSASASSSATHSPSGSPHTSTESLPYAAFHRIGRHNRPPVVYAIGAAKACCYTQFDGSPRFLYRGPHCNYYCH*

>Glyma.04g187700.2.p sequence-type=predicted peptide transcript=Glyma.04g187700.2 locus=Glyma.04g187700 id=Glyma.04g187700.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MESKPAQTIKLLCSYGGKILPRATDGELRYVGGHTRVLTVDRSISFPELMVKLRVFCGSSVILRCQLPKGDLETLISITNDEDLASIIEEYDRSSLKLAHPLKIKAVLSPPKSMKKASPVPSSASASSSATHSPSGSPHTSTESLPYAAFHRIGRHNRPPVVYAIGAAKACCYTQFDGSPRFLYRGPHCNYYCH*

>Glyma.04g187700.3.p sequence-type=predicted peptide transcript=Glyma.04g187700.3 locus=Glyma.04g187700 id=Glyma.04g187700.3.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MESKPAQTIKLLCSYGGKILPRATDGELRYVGGHTRVLTVDRSISFPGSFLFPLAFVLRFFYLPLFHEFDDSLLRCAELMVKLRVFCGSSVILRCQLPKGDLETLISITNDEDLASIIEEYDRSSLKLAHPLKIKAVLSPPKSMKKASPVPSSASASSSATHSPSGSPHTSTESLPYAAFHRIGRHNRPPVVYAIGAAKACCYTQFDGSPRFLYRGPHCNYYCH*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo