SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.04g187500

Feature Type:gene_model
Chromosome:Gm04
Start:44648415
stop:44650184
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.04g187500
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G70600.1AT JGI N/AIEA
K02900KEGG Ribosome JGI N/AIEA
KOG1742 KOG 60s ribosomal protein L15/L27 JGI N/AIEA
PTHR11721PantherFam 60S RIBOSOMAL PROTEIN L27A JGI N/AIEA
PF00828Pfam Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A JGI N/AIEA

Gene model name correspondences to Glyma.04g187500 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma04g36140 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.04g187500
>Glyma.04g187500.1 sequence-type=CDS polypeptide=Glyma.04g187500.1.p locus=Glyma.04g187500 id=Glyma.04g187500.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGACTACACGCTTCAAGAAGAACAGGAAGAAGAGAGGCCACGTGAGTGCCGGCCATGGCCGCATCGGGAAGCACCGGAAGCACCCTGGAGGACGCGGTAATGCCGGAGGCATGCACCACCACCGGATCCTCTTTGACAAGTACCACCCTGGGTTCTTCGGCAAGGTCGGAATGCGCTATTTTCACAAGCTCCGCAACAAATTCTACTCTCCGATCCTCAACATCGACAAGCTCTGGTCCCTGGTTCCGCAAGAAGTGAAGGACAAGGCCTCCAAGGAGAACAAGGCGCCGCTGATCGACGTCACGCAGTTCGGGTACTTTAAGGTTCTCGGAAAGGGTGTTTTGCCGCAGAACCAGCCCGTTGTTGTCAAAGCTAAGCTTATTTCCAAGATCGCTGAGAAGAAGATCAAGGAGGCTGGCGGTGCTGTTGTTCTCACCGCCTGA
Predicted protein sequences of Glyma.04g187500
>Glyma.04g187500.1.p sequence-type=predicted peptide transcript=Glyma.04g187500.1 locus=Glyma.04g187500 id=Glyma.04g187500.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGFFGKVGMRYFHKLRNKFYSPILNIDKLWSLVPQEVKDKASKENKAPLIDVTQFGYFKVLGKGVLPQNQPVVVKAKLISKIAEKKIKEAGGAVVLTA*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo