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Report for Sequence Feature Glyma.04g187000

Feature Type:gene_model
Chromosome:Gm04
Start:44552389
stop:44557453
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.04g187000
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G63110.1AT ATHDA6,AXE1,HDA6,RPD3B,RTS1,SIL1 JGI N/AIEA
3.5.1.98EC histone deacetylase JGI N/AIEA
K06067KEGG Chromosome and associated proteins JGI N/AIEA
PF00850Pfam Histone deacetylase domain JGI N/AIEA

Proteins Associated with Glyma.04g187000
LocusGene SymbolProtein Name
HDA3 histone deacetylase

Gene model name correspondences to Glyma.04g187000 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma04g36090 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.04g187000
>Glyma.04g187000.1 sequence-type=CDS polypeptide=Glyma.04g187000.1.p locus=Glyma.04g187000 id=Glyma.04g187000.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCGAGAGGGGAGAGAGCGGAGACAGAGAGTGGCGTTTCGTTGCCCTCGGTGGGCACGGACGCGAAGAAGCGGAGAGTAACGTACTTCTACGAGCCGTGCATCGGCGACTACTACTACGGGCAAGGGCATCCGATGAAGCCTCACCGCATTCGCATGGCCCACAACCTCATCGTTCACTACGGCCTCCACCGCCGCATGCAGGTCAACCGCCCCTTCCCCGCGGCGGAGGCCGACATCGGCCGCTTCCACGCCGACGACTACGTCGACTTCCTCTCCACCGTCTCGCCGCAAATCCTCTCCGAGAATTCCCACTCCCACTACCGTCAGCTCAAGCGCTTCAACGTCGGCGAGGACTGCCCCGTCTTCGACGGCCTCTTCGACTTCTGCCGCGCCTCCGCCGGCGGCTCCATCGGCGCCGCCGTCCGCCTCAACCGCGAAGACGCCGACGTCGCCATCAATTGGGCCGGCGGCCTGCACCACGCCAAGAAGGCCGAGGCCTCCGGGTTTTGCTATGTTAACGACATTGTTCTCGGCATTCTAGAACTTCTCAAAGTTCATAGGCGTGTGCTGTATATTGATATTGATGTTCACCATGGAGATGGCGTTGAGGAGGCATTTTACACTACTGATAGGGTGATGACAGTGTCATTTCATAAGTTTGGGGATTTTTTCCCAGGAACTGGGCACATTAAAGACATTGGGGTGGGTGCTGGAAAGAATTATTCTCTAAACGTCCCACTCAATGATGGATTGGATGATGAGACTTTCCGTGGTCTGTTTCGCCCCATCATTCAAAAAGTCATGGATGTTTATCAACCGGATGCAGTTGTTCTTCAATGTGGAGCTGACTCGTTGTCTGGTGATCGGTTGGGTTGCTTCAACTTGACTGTGAAGGGCCATGCAGATTGCCTTCGTTTCCTTAGATCATTCAATGTCCCTCTAATGGTCTTGGGTGGGGGAGGATATACGGTTCGCAATGTTGCTCGTTGTTGGTGTTATGAGACTGCAGTGGCAGTAGGAGTGGAGCCTAGTCCTAAGTTGCCTTACAATGAATATTATGAATATTTTGGCCCGGACTATAATCTTCATGTTGAGCCATCCACAATGGAAAACCTAAACACACCCAGGGATCTGGAAAAAATTCGGAATACATTACTGGAACAACTTTCCAGGCTTCCCCATGCACCCAGTGCACCTTTTCAAACAACACCATCGGTCATCGAAGTTCCAGAAGAGGAAGAGGAGGACATGGATGTAAGGCCAAAACGTCGTATATGGAGTGGTGAAGATTTTGATTCGGATCATGATGATGACATGGCTAGTTCAAAGAACTCTGATTTAACTGCACAAACGAGCAGGTCTGTTGCAGATGACATGGACGAAGATAAAGATTAA

>Glyma.04g187000.2 sequence-type=CDS polypeptide=Glyma.04g187000.2.p locus=Glyma.04g187000 id=Glyma.04g187000.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCGAGAGGGGAGAGAGCGGAGACAGAGAGTGGCGTTTCGTTGCCCTCGGTGGGCACGGACGCGAAGAAGCGGAGAGTAACGTACTTCTACGAGCCGTGCATCGGCGACTACTACTACGGGCAAGGGCATCCGATGAAGCCTCACCGCATTCGCATGGCCCACAACCTCATCGTTCACTACGGCCTCCACCGCCGCATGCAGGTCAACCGCCCCTTCCCCGCGGCGGAGGCCGACATCGGCCGCTTCCACGCCGACGACTACGTCGACTTCCTCTCCACCGTCTCGCCGCAAATCCTCTCCGAGAATTCCCACTCCCACTACCGTCAGCTCAAGCGCTTCAACGTCGGCGAGGACTGCCCCGTCTTCGACGGCCTCTTCGACTTCTGCCGCGCCTCCGCCGGCGGCTCCATCGGCGCCGCCGTCCGCCTCAACCGCGAAGACGCCGACGTCGCCATCAATTGGGCCGGCGGCCTGCACCACGCCAAGAAGGCCGAGGCCTCCGGGTTTTGCTATGTTAACGACATTGTTCTCGGCATTCTAGAACTTCTCAAAGTTCATAGGCGTGTGCTGTATATTGATATTGATGTTCACCATGGAGATGGCGTTGAGGAGGCATTTTACACTACTGATAGGGTGATGACAGTGTCATTTCATAAGTTTGGGGATTTTTTCCCAGGAACTGGGCACATTAAAGACATTGGGGTGGGTGCTGGAAAGAATTATTCTCTAAACGTCCCACTCAATGATGGATTGGATGATGAGACTTTCCGTGGTCTGTTTCGCCCCATCATTCAAAAAGTCATGGATGTTTATCAACCGGATGCAGTTGTTCTTCAATGTGGAGCTGACTCGTTGTCTGGTGATCGGTTGGGTTGCTTCAACTTGACTGTGAAGGGCCATGCAGATTGCCTTCGTTTCCTTAGATCATTCAATGTCCCTCTAATGGTCTTGGGTGGGGGAGGATATACGGTTCGCAATGTTGCTCGTTGTTGGTGTTATGAGACTGCAGTGGCAGTAGGAGTGGAGCCTAGTCCTAAGTTGCCTTACAATGAATATTATGAATATTTTGGCCCGGACTATAATCTTCATGTTGAGCCATCCACAATGGAAAACCTAAACACACCCAGGGATCTGGAAAAAATTCGGAATACATTACTGGAACAACTTTCCAGGCTTCCCCATGCACCCAGTGCACCTTTTCAAACAACACCATCGGTCATCGAAGTTCCAGAAGAGGAAGAGGAGGACATGGATGTAAGGCCAAAACGTCGTATATGGAGTGGTGAAGATTTTGATTCGGATCATGATGATGACATGGCTAGTTCAAAGAACTCTGATTTAACTGCACAAACGAGGTCTGTTGCAGATGACATGGACGAAGATAAAGATTAA
Predicted protein sequences of Glyma.04g187000
>Glyma.04g187000.1.p sequence-type=predicted peptide transcript=Glyma.04g187000.1 locus=Glyma.04g187000 id=Glyma.04g187000.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MARGERAETESGVSLPSVGTDAKKRRVTYFYEPCIGDYYYGQGHPMKPHRIRMAHNLIVHYGLHRRMQVNRPFPAAEADIGRFHADDYVDFLSTVSPQILSENSHSHYRQLKRFNVGEDCPVFDGLFDFCRASAGGSIGAAVRLNREDADVAINWAGGLHHAKKAEASGFCYVNDIVLGILELLKVHRRVLYIDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIKDIGVGAGKNYSLNVPLNDGLDDETFRGLFRPIIQKVMDVYQPDAVVLQCGADSLSGDRLGCFNLTVKGHADCLRFLRSFNVPLMVLGGGGYTVRNVARCWCYETAVAVGVEPSPKLPYNEYYEYFGPDYNLHVEPSTMENLNTPRDLEKIRNTLLEQLSRLPHAPSAPFQTTPSVIEVPEEEEEDMDVRPKRRIWSGEDFDSDHDDDMASSKNSDLTAQTSRSVADDMDEDKD*

>Glyma.04g187000.2.p sequence-type=predicted peptide transcript=Glyma.04g187000.2 locus=Glyma.04g187000 id=Glyma.04g187000.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MARGERAETESGVSLPSVGTDAKKRRVTYFYEPCIGDYYYGQGHPMKPHRIRMAHNLIVHYGLHRRMQVNRPFPAAEADIGRFHADDYVDFLSTVSPQILSENSHSHYRQLKRFNVGEDCPVFDGLFDFCRASAGGSIGAAVRLNREDADVAINWAGGLHHAKKAEASGFCYVNDIVLGILELLKVHRRVLYIDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIKDIGVGAGKNYSLNVPLNDGLDDETFRGLFRPIIQKVMDVYQPDAVVLQCGADSLSGDRLGCFNLTVKGHADCLRFLRSFNVPLMVLGGGGYTVRNVARCWCYETAVAVGVEPSPKLPYNEYYEYFGPDYNLHVEPSTMENLNTPRDLEKIRNTLLEQLSRLPHAPSAPFQTTPSVIEVPEEEEEDMDVRPKRRIWSGEDFDSDHDDDMASSKNSDLTAQTRSVADDMDEDKD*






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