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Report for Sequence Feature Glyma.04g184900

Feature Type:gene_model
Chromosome:Gm04
Start:45438332
stop:45443037
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.04g184900
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G17990.1AT tryptophan biosynthesis 1 JGI N/AIEA
GO:0000162GO-bp tryptophan biosynthetic process EnsemblGenomesN/AIEA
GO:0008152GO-bp metabolic process EnsemblGenomesN/AIEA
GO:0008152GO-bp metabolic process JGI N/AIEA
GO:0009570GO-cc chloroplast stroma EnsemblGenomesN/AIEA
GO:0004048GO-mf anthranilate phosphoribosyltransferase activity EnsemblGenomesN/AIEA
GO:0016757GO-mf transferase activity, transferring glycosyl groups EnsemblGenomesN/AIEA
GO:0016757GO-mf transferase activity, transferring glycosyl groups JGI N/AIEA
KOG1438 KOG Anthranilate phosphoribosyltransferase JGI N/AIEA
PTHR11922Panther GMP SYNTHASE-RELATED JGI N/AIEA
PTHR11922:SF6Panther JGI N/AIEA
PF00591PFAM Glycosyl transferase family, a/b domain JGI N/AIEA
PF02885PFAM Glycosyl transferase family, helical bundle domain JGI N/AIEA
TRPSYN-PWYSoyCyc9 L-tryptophan biosynthesis Plant Metabolic Network ISS
GN7V-50541SoyCyc9-rxn anthranilate phosphoribosyltransferase Plant Metabolic Network ISS

Expression Patterns of Glyma.04g184900
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.04g184900 not represented in the dataset
Glyma.04g184900 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.04g184900 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma04g35820 Wm82.a1.v1.1IGC As supplied by JGI


Transcripts of Glyma.04g184900
>Glyma.04g184900.2 sequence-type=transcript locus=Glyma.04g184900 ID=Glyma.04g184900.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
TCCCCATTTGTTTATCCCCTATCTTTACTTTCCTTCCATAGAAAGGAATCAAGATTTTTCCCAATAAACTATGGGTGACATCTCACAAATCACCTGCTGATTTTGCTGCCATTTCGAGAGGGGACGAACGAGACAGCAACATATCATCTCCGACCAAATCCCGTTCATTCAGGCAGTGTTCATTTCTCTGCCCCTCACTTACTTATTCACTCCCAACTCCAAAACCATCATCGTCAATATGGCACAAGCACACGCTCTATTTTCTCCTTTCAATCCTCGCCTTCTTCCTTCTTCCTCCCCCATTCTCCGACGCCGTTTCTTTTCCCTTCCAATTTCTCCGTTAACTCACCGGACCGTGATTGCCTCCGAAAACGTCGCCGTTTCGCCTGATGCCGCCTCGTCTACTCACTCTCTCCCCCAGGTGATTGAAACCCTGATTTCCGGAGTGGATTTATCGGAGGAGGAAGCCGAAGCGTGTCTCAACTTGCTGCTGCACGAACCAAACGAGGCCTTAATCAGCGCTCTTCTCGTGCTTCTCAGAGCCAAAGGAGAGACCTATGAAGAAGTTGTGGGGTTGGCGAGGGCAATGTTTAAACACGCGACGAAGGTGGAGGGTTTGGACGATGTGGTGGACATCGTGGGAACCGGAGGGGACGGTGCCAACACGGTCAACATTTCGACCGGTGCTTCGATTCTCGCCGCGGCTTGCGGTGCCAGAGTTGCAAAGCAAGGGAGCCGTTCCAGTTCTTCTGCGTGTGGGAGTGCCGATGTGTTGGAAGCTTTGGGAGTGGTCATTGACTTAGGTCCACAGGGGGTGAAGAGGTGTGTGGATGAAGCTGGGATGGGGTTTATGATGTCTACAAAGTATCACCCATCAATGAAGATTGTCAGGCCTGTAAGAAAGAAGCTAAAGATAAAAACTATATTCAATATATTGGGTCCAATGTTGAATCCAGCACATGCCCCTTTTGCCGTTGTTGGAGTATACACAGAGGACTTGGTCCTTAAAATGGCCAAAGCACTCAATAGATTTGGCATGAAACGAGCCTTAGTTGTCCACTCTGAAGGTTTGGATGAAATGAGTCCTCTTGGACCTGGTATAGTGCTTGATGTTATGGCTGACAGGGTTGATAAGTTTGCATTTGATCCCTTGGAGTTTGGCATTCCACGGTGCAATATTGAAAGCTTAAAAGGTGGTGGTCCAGAATACAATGCAGAGGTTTTGAAGCGTGTTCTAGGTGGAGAGAGAGGGCCAATTGCAGATGCTTTGATTCTCAATGCCGCAGCAGCTCTCTTAGTCAGTGGCTGTGTAAGTAACCTAGCTGAAGGGGTTTCTGTGGCACGTGAAACACAACAATCAGGAAAGGCTCTGAAAACACTCAACCTGTTGAAGGATGTCTCAAATAACATCAAAGATGAGTTGGGCATGGATGCCTGAATTGTTTTGTGGCCCAGGTTGTGAGTTTTGTAAACTTGATTCAAACAAGAGGAGCTTGGAAGGCCTCATATAGTACATGTATTATTAAAGAGATGTACAAAAATAATTTAATTTATTATTGTAAAATTATTTACCCTTCAGTACTGTGCAAAAAGGTTTTAGAATTAGTTAAGAAGGATTATAATTTGTTTTCATTTATCATGTCACTTGACAAAGTGACATAGGAAATGGATTTTTTTATCTGAAAAAAGATTGAGATTCGATGTAAGATTTCATGGACCAATTGTTGCGAAAAGTTATTTCATGGTTTCCAGTTCTATGCTTAGAAAGCTGAATGATGTGTTTGGTA

>Glyma.04g184900.3 sequence-type=transcript locus=Glyma.04g184900 ID=Glyma.04g184900.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
CTTTACTTTCCTTCCATAGAAAGGAATCAAGATTTTTCCCAATAAACTATGGGTGACATCTCACAAATCACCTGCTGATTTTGCTGCCATTTCGAGAGGGGACGAACGAGACAGCAACATATCATCTCCGACCAAATCCCGTTCATTCAGGCAGTGTTCATTTCTCTGCCCCTCACTTACTTATTCACTCCCAACTCCAAAACCATCATCGTCAATATGGCACAAGCACACGCTCTATTTTCTCCTTTCAATCCTCGCCTTCTTCCTTCTTCCTCCCCCATTCTCCGACGCCGTTTCTTTTCCCTTCCAATTTCTCCGTTAACTCACCGGACCGTGATTGCCTCCGAAAACGTCGCCGTTTCGCCTGATGCCGCCTCGTCTACTCACTCTCTCCCCCAGGTCTTCAATTCCTTATTCTTTTTTATTTCCATTCATTGAAACTGAAATTGAAAACGCCGTGCGTAGCAGGTGATTGAAACCCTGATTTCCGGAGTGGATTTATCGGAGGAGGAAGCCGAAGCGTGTCTCAACTTGCTGCTGCACGAACCAAACGAGGCCTTAATCAGCGCTCTTCTCGTGCTTCTCAGAGCCAAAGGAGAGACCTATGAAGAAGTTGTGGGGTTGGCGAGGGCAATGTTTAAACACGCGACGAAGGTGGAGGGTTTGGACGATGTGGTGGACATCGTGGGAACCGGAGGGGACGGTGCCAACACGGTCAACATTTCGACCGGTGCTTCGATTCTCGCCGCGGCTTGCGGTGCCAGAGTTGCAAAGCAAGGGAGCCGTTCCAGTTCTTCTGCGTGTGGGAGTGCCGATGTGTTGGAAGCTTTGGGAGTGGTCATTGACTTAGGTCCACAGGGGGTGAAGAGGTGTGTGGATGAAGCTGGGATGGGGTTTATGATGTCTACAAAGTATCACCCATCAATGAAGATTGTCAGGCCTGTAAGAAAGAAGCTAAAGATAAAAACTATATTCAATATATTGGGTCCAATGTTGAATCCAGCACATGCCCCTTTTGCCGTTGTTGGAGTATACACAGAGGACTTGGTCCTTAAAATGGCCAAAGCACTCAATAGATTTGGCATGAAACGAGCCTTAGTTGTCCACTCTGAAGGTTTGGATGAAATGAGTCCTCTTGGACCTGGTATAGTGCTTGATGTTATGGCTGACAGGGTTGATAAGTTTGCATTTGATCCCTTGGAGTTTGGCATTCCACGGTGCAATATTGAAAGCTTAAAAGGTGGTGGTCCAGAATACAATGCAGAGGTTTTGAAGCGTGTTCTAGGTGGAGAGAGAGGGCCAATTGCAGATGCTTTGATTCTCAATGCCGCAGCAGCTCTCTTAGTCAGTGGCTGTGTAAGTAACCTAGCTGAAGGGGTTTCTGTGGCACGTGAAACACAACAATCAGGAAAGGCTCTGAAAACACTCAACCTGTTGAAGGATGTCTCAAATAACATCAAAGATGAGTTGGGCATGGATGCCTGAATTGTTTTGTGGCCCAGGTTGTGAGTTTTGTAAACTTGATTCAAACAAGAGGAGCTTGGAAGGCCTCATATAGTACATGTATTATTAAAGAGATGTACAAAAATAATTTAATTTATTATTGTAAAATTATTTACCCTTCAGTACTGTGCAAAAAGGTTTTAGAATTAGTTAAGAAGGATTATAATTTGTTTTCATTTATCATGTCACTTGACAAAGTGACATAGGAAATGGATTTTTTTATCTGAAAAAAGATTGAGATTCGATGTAAGATTTCATGGACCAATTGTTGCGAAAAGTTATTTCATGGTTTCCAGTTCTATGCTTAGAAAGCTGAATGATGTGTTTGGTA
Coding sequences of Glyma.04g184900
>Glyma.04g184900.1 sequence-type=CDS polypeptide=Glyma.04g184900.1.p locus=Glyma.04g184900 ID=Glyma.04g184900.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCACAAGCACACGCTCTATTTTCTCCTTTCAATCCTCGCCTTCTTCCTTCTTCCTCCCCCATTCTCCGACGCCGTTTCTTTTCCCTTCCAATTTCTCCGTTAACTCACCGGACCGTGATTGCCTCCGAAAACGTCGCCGTTTCGCCTGATGCCGCCTCGTCTACTCACTCTCTCCCCCAGCAGGTGATTGAAACCCTGATTTCCGGAGTGGATTTATCGGAGGAGGAAGCCGAAGCGTGTCTCAACTTGCTGCTGCACGAACCAAACGAGGCCTTAATCAGCGCTCTTCTCGTGCTTCTCAGAGCCAAAGGAGAGACCTATGAAGAAGTTGTGGGGTTGGCGAGGGCAATGTTTAAACACGCGACGAAGGTGGAGGGTTTGGACGATGTGGTGGACATCGTGGGAACCGGAGGGGACGGTGCCAACACGGTCAACATTTCGACCGGTGCTTCGATTCTCGCCGCGGCTTGCGGTGCCAGAGTTGCAAAGCAAGGGAGCCGTTCCAGTTCTTCTGCGTGTGGGAGTGCCGATGTGTTGGAAGCTTTGGGAGTGGTCATTGACTTAGGTCCACAGGGGGTGAAGAGGTGTGTGGATGAAGCTGGGATGGGGTTTATGATGTCTACAAAGTATCACCCATCAATGAAGATTGTCAGGCCTGTAAGAAAGAAGCTAAAGATAAAAACTATATTCAATATATTGGGTCCAATGTTGAATCCAGCACATGCCCCTTTTGCCGTTGTTGGAGTATACACAGAGGACTTGGTCCTTAAAATGGCCAAAGCACTCAATAGATTTGGCATGAAACGAGCCTTAGTTGTCCACTCTGAAGGTTTGGATGAAATGAGTCCTCTTGGACCTGGTATAGTGCTTGATGTTATGGCTGACAGGGTTGATAAGTTTGCATTTGATCCCTTGGAGTTTGGCATTCCACGGTGCAATATTGAAAGCTTAAAAGGTGGTGGTCCAGAATACAATGCAGAGGTTTTGAAGCGTGTTCTAGGTGGAGAGAGAGGGCCAATTGCAGATGCTTTGATTCTCAATGCCGCAGCAGCTCTCTTAGTCAGTGGCTGTGTAAGTAACCTAGCTGAAGGGGTTTCTGTGGCACGTGAAACACAACAATCAGGAAAGGCTCTGAAAACACTCAACCTGTTGAAGGATGTCTCAAATAACATCAAAGATGAGTTGGGCATGGATGCCTGA

>Glyma.04g184900.2 sequence-type=CDS polypeptide=Glyma.04g184900.2.p locus=Glyma.04g184900 ID=Glyma.04g184900.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCACAAGCACACGCTCTATTTTCTCCTTTCAATCCTCGCCTTCTTCCTTCTTCCTCCCCCATTCTCCGACGCCGTTTCTTTTCCCTTCCAATTTCTCCGTTAACTCACCGGACCGTGATTGCCTCCGAAAACGTCGCCGTTTCGCCTGATGCCGCCTCGTCTACTCACTCTCTCCCCCAGGTGATTGAAACCCTGATTTCCGGAGTGGATTTATCGGAGGAGGAAGCCGAAGCGTGTCTCAACTTGCTGCTGCACGAACCAAACGAGGCCTTAATCAGCGCTCTTCTCGTGCTTCTCAGAGCCAAAGGAGAGACCTATGAAGAAGTTGTGGGGTTGGCGAGGGCAATGTTTAAACACGCGACGAAGGTGGAGGGTTTGGACGATGTGGTGGACATCGTGGGAACCGGAGGGGACGGTGCCAACACGGTCAACATTTCGACCGGTGCTTCGATTCTCGCCGCGGCTTGCGGTGCCAGAGTTGCAAAGCAAGGGAGCCGTTCCAGTTCTTCTGCGTGTGGGAGTGCCGATGTGTTGGAAGCTTTGGGAGTGGTCATTGACTTAGGTCCACAGGGGGTGAAGAGGTGTGTGGATGAAGCTGGGATGGGGTTTATGATGTCTACAAAGTATCACCCATCAATGAAGATTGTCAGGCCTGTAAGAAAGAAGCTAAAGATAAAAACTATATTCAATATATTGGGTCCAATGTTGAATCCAGCACATGCCCCTTTTGCCGTTGTTGGAGTATACACAGAGGACTTGGTCCTTAAAATGGCCAAAGCACTCAATAGATTTGGCATGAAACGAGCCTTAGTTGTCCACTCTGAAGGTTTGGATGAAATGAGTCCTCTTGGACCTGGTATAGTGCTTGATGTTATGGCTGACAGGGTTGATAAGTTTGCATTTGATCCCTTGGAGTTTGGCATTCCACGGTGCAATATTGAAAGCTTAAAAGGTGGTGGTCCAGAATACAATGCAGAGGTTTTGAAGCGTGTTCTAGGTGGAGAGAGAGGGCCAATTGCAGATGCTTTGATTCTCAATGCCGCAGCAGCTCTCTTAGTCAGTGGCTGTGTAAGTAACCTAGCTGAAGGGGTTTCTGTGGCACGTGAAACACAACAATCAGGAAAGGCTCTGAAAACACTCAACCTGTTGAAGGATGTCTCAAATAACATCAAAGATGAGTTGGGCATGGATGCCTGA

>Glyma.04g184900.3 sequence-type=CDS polypeptide=Glyma.04g184900.3.p locus=Glyma.04g184900 ID=Glyma.04g184900.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGTTTAAACACGCGACGAAGGTGGAGGGTTTGGACGATGTGGTGGACATCGTGGGAACCGGAGGGGACGGTGCCAACACGGTCAACATTTCGACCGGTGCTTCGATTCTCGCCGCGGCTTGCGGTGCCAGAGTTGCAAAGCAAGGGAGCCGTTCCAGTTCTTCTGCGTGTGGGAGTGCCGATGTGTTGGAAGCTTTGGGAGTGGTCATTGACTTAGGTCCACAGGGGGTGAAGAGGTGTGTGGATGAAGCTGGGATGGGGTTTATGATGTCTACAAAGTATCACCCATCAATGAAGATTGTCAGGCCTGTAAGAAAGAAGCTAAAGATAAAAACTATATTCAATATATTGGGTCCAATGTTGAATCCAGCACATGCCCCTTTTGCCGTTGTTGGAGTATACACAGAGGACTTGGTCCTTAAAATGGCCAAAGCACTCAATAGATTTGGCATGAAACGAGCCTTAGTTGTCCACTCTGAAGGTTTGGATGAAATGAGTCCTCTTGGACCTGGTATAGTGCTTGATGTTATGGCTGACAGGGTTGATAAGTTTGCATTTGATCCCTTGGAGTTTGGCATTCCACGGTGCAATATTGAAAGCTTAAAAGGTGGTGGTCCAGAATACAATGCAGAGGTTTTGAAGCGTGTTCTAGGTGGAGAGAGAGGGCCAATTGCAGATGCTTTGATTCTCAATGCCGCAGCAGCTCTCTTAGTCAGTGGCTGTGTAAGTAACCTAGCTGAAGGGGTTTCTGTGGCACGTGAAACACAACAATCAGGAAAGGCTCTGAAAACACTCAACCTGTTGAAGGATGTCTCAAATAACATCAAAGATGAGTTGGGCATGGATGCCTGA
Predicted protein sequences of Glyma.04g184900
>Glyma.04g184900.1.p sequence-type=predicted peptide transcript=Glyma.04g184900.1 locus=Glyma.04g184900 ID=Glyma.04g184900.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MAQAHALFSPFNPRLLPSSSPILRRRFFSLPISPLTHRTVIASENVAVSPDAASSTHSLPQQVIETLISGVDLSEEEAEACLNLLLHEPNEALISALLVLLRAKGETYEEVVGLARAMFKHATKVEGLDDVVDIVGTGGDGANTVNISTGASILAAACGARVAKQGSRSSSSACGSADVLEALGVVIDLGPQGVKRCVDEAGMGFMMSTKYHPSMKIVRPVRKKLKIKTIFNILGPMLNPAHAPFAVVGVYTEDLVLKMAKALNRFGMKRALVVHSEGLDEMSPLGPGIVLDVMADRVDKFAFDPLEFGIPRCNIESLKGGGPEYNAEVLKRVLGGERGPIADALILNAAAALLVSGCVSNLAEGVSVARETQQSGKALKTLNLLKDVSNNIKDELGMDA*

>Glyma.04g184900.2.p sequence-type=predicted peptide transcript=Glyma.04g184900.2 locus=Glyma.04g184900 ID=Glyma.04g184900.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MAQAHALFSPFNPRLLPSSSPILRRRFFSLPISPLTHRTVIASENVAVSPDAASSTHSLPQVIETLISGVDLSEEEAEACLNLLLHEPNEALISALLVLLRAKGETYEEVVGLARAMFKHATKVEGLDDVVDIVGTGGDGANTVNISTGASILAAACGARVAKQGSRSSSSACGSADVLEALGVVIDLGPQGVKRCVDEAGMGFMMSTKYHPSMKIVRPVRKKLKIKTIFNILGPMLNPAHAPFAVVGVYTEDLVLKMAKALNRFGMKRALVVHSEGLDEMSPLGPGIVLDVMADRVDKFAFDPLEFGIPRCNIESLKGGGPEYNAEVLKRVLGGERGPIADALILNAAAALLVSGCVSNLAEGVSVARETQQSGKALKTLNLLKDVSNNIKDELGMDA*

>Glyma.04g184900.3.p sequence-type=predicted peptide transcript=Glyma.04g184900.3 locus=Glyma.04g184900 ID=Glyma.04g184900.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
MFKHATKVEGLDDVVDIVGTGGDGANTVNISTGASILAAACGARVAKQGSRSSSSACGSADVLEALGVVIDLGPQGVKRCVDEAGMGFMMSTKYHPSMKIVRPVRKKLKIKTIFNILGPMLNPAHAPFAVVGVYTEDLVLKMAKALNRFGMKRALVVHSEGLDEMSPLGPGIVLDVMADRVDKFAFDPLEFGIPRCNIESLKGGGPEYNAEVLKRVLGGERGPIADALILNAAAALLVSGCVSNLAEGVSVARETQQSGKALKTLNLLKDVSNNIKDELGMDA*






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