SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.04g179300

Feature Type:gene_model
Chromosome:Gm04
Start:43262456
stop:43264660
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.04g179300
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G65200.1AT ATPUB38,PUB38 JGI N/AIEA
GO:0016567GO-bp protein ubiquitination JGI N/AIEA
GO:0004842GO-mf ubiquitin-protein transferase activity JGI N/AIEA
PTHR23315PantherFam U BOX DOMAIN-CONTAINING JGI N/AIEA
PF04564Pfam U-box domain JGI N/AIEA

Gene model name correspondences to Glyma.04g179300 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma04g35020 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.04g179300
>Glyma.04g179300.1 sequence-type=CDS polypeptide=Glyma.04g179300.1.p locus=Glyma.04g179300 id=Glyma.04g179300.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGGTGGCAACGGCAAGCACAGGTGGAAATTCTCCTTCCACCGTTCCTCATCCCAAACCTCCAATCCCGACCCGAACCAAGTTCCCAAGGAGTTCACCTGCCCCATTTCCGGCTCACTAATGTCCGACCCTGTCGTCGTAGCCTCGGGCCAAACCTTCGAACGCCTCGCCGTTCAACTCTGCAAAGACCTCAACTTCTCCCCGAAGCTGGACGACGGCACCCGACCCGACTTCTCCACCATAATCCCCAACCTCGCCATCAAAACGACGATCCTCCACTGGTGCGACAATTCCCGCACCCAACCCCCGCTCCCACCGGATTACGCCTCCCTCGAGCGCCACGTCAGAGAAGAAAAAGAAAAACAAGACCTAATTAGGGTTTCCGAAAAGGAGCTTCTCAACGCGGTGGCCGACAACCCTCCTGTCATCTTCTCCCACGCCGCCACCGAGTTAGGCCCCCGAGTCAATCACTTCAACTCCGGATCCTCCTCCGAGGAATCCGTCATCATCCCTCCGAGTCCGGGAACGCCGTTGCCGTTAACGATTCGTCCAACGTGCTTCTCTTCCTCCTCCTCCTCCTGCGAGATCGAAATCGAAAACCCCAACACACCGGCATCGGAGGAGGAAGAAGGGATATTGAAGAAATTGAAGAGTAACGAGGTGTTTGAGCAAGAAGAAGGCGCAATCGCGCTGAGGAAGATCACGAGGTGCAAAGAGGAGGCTAGGGTTTCGCTCTGCACGCCGCGGGTGCTGTTAGCGCTTCGTGGTTTACTCGCTTCCCGATACGGCGTCGTTCAGGTCAACGCAGTGGCGTCTTTGGTCAACCTTTCTCTTGAGAAGCAGAACAAGTTGAAGATCGTTAGGTCAGGGTTTGTGCCGTTTTTAATCGATGTTTTGAAGGGGGGATTGGGTGAGTCGCAGGAGCACGCTGCGGGCGCACTTTTTAGTTTGGCTTTGGACGATGACAACAAGATGGCGATTGGCGTTCTCGGCGCGTTGCATCCGTTGATGCACGCGCTTCGTGCCGAGTCCGAGCGGACTCGGCACGACTCAGCGCTCGCGCTGTATCATTTGTCACTTGTACAGAGCAACAGATTGAAATTGGTTAAACTCGGGGCTGTCCCCACGCTCCTCTCGATGGTGGTGGCGGGGAATTTGGCGAGCCGGGTGCTGCTGATTCTCTGCAACCTCGCCGTGTGCACCGAGGGGCGCACGGCGATGCTGGACGCCAACGCGGTGGAGATTCTGGTGGGGTTATTACGAGGGAACGAGTTGGACTCGGAGGCGAATCGGGAGAATTGCGTGGCGGCTTTGTACGCGCTGAGTCATAGAAGCTTGAGGTTCAAGGGTTTGGCCAAGGACGCGAGAGTGGTGGAGGTTTTGAAGGAGATCGAACAAACGGGAACGGAGAGGGCGAGGGAGAGGGCGAGGAAGGTGTTGCATATGATGAGGACTGTGGGAGATGGGGACGGTGATGAGATTGACGAGTTTTACGACTCGGCCGGATTGACTCGGAATCGGTACCGAGTTGGTGCTGCCAGGAATAACAACAACCTCGTCAACACGACCACGTTTTAG
Predicted protein sequences of Glyma.04g179300
>Glyma.04g179300.1.p sequence-type=predicted peptide transcript=Glyma.04g179300.1 locus=Glyma.04g179300 id=Glyma.04g179300.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MGGNGKHRWKFSFHRSSSQTSNPDPNQVPKEFTCPISGSLMSDPVVVASGQTFERLAVQLCKDLNFSPKLDDGTRPDFSTIIPNLAIKTTILHWCDNSRTQPPLPPDYASLERHVREEKEKQDLIRVSEKELLNAVADNPPVIFSHAATELGPRVNHFNSGSSSEESVIIPPSPGTPLPLTIRPTCFSSSSSSCEIEIENPNTPASEEEEGILKKLKSNEVFEQEEGAIALRKITRCKEEARVSLCTPRVLLALRGLLASRYGVVQVNAVASLVNLSLEKQNKLKIVRSGFVPFLIDVLKGGLGESQEHAAGALFSLALDDDNKMAIGVLGALHPLMHALRAESERTRHDSALALYHLSLVQSNRLKLVKLGAVPTLLSMVVAGNLASRVLLILCNLAVCTEGRTAMLDANAVEILVGLLRGNELDSEANRENCVAALYALSHRSLRFKGLAKDARVVEVLKEIEQTGTERARERARKVLHMMRTVGDGDGDEIDEFYDSAGLTRNRYRVGAARNNNNLVNTTTF*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo