SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.04g178300

Feature Type:gene_model
Chromosome:Gm04
Start:43106403
stop:43114506
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.04g178300
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G48160.2AT DEL1,E2FE,E2L3 JGI N/AIEA
GO:0006355GO-bp regulation of transcription, DNA-templated JGI N/AIEA
GO:0005667GO-cc transcription regulator complex JGI N/AIEA
GO:0003700GO-mf DNA-binding transcription factor activity JGI N/AIEA
PTHR12081PantherFam TRANSCRIPTION FACTOR E2F JGI N/AIEA
PF02319Pfam E2F/DP family winged-helix DNA-binding domain JGI N/AIEA

Gene model name correspondences to Glyma.04g178300 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma04g34870 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.04g178300
>Glyma.04g178300.3 sequence-type=CDS polypeptide=Glyma.04g178300.3.p locus=Glyma.04g178300 id=Glyma.04g178300.3.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGTCAAATCCTCCTCCAAGAATGAAAACAGAAGGGAAAAATCTCTGGCATTGCTTACACAGAATTTTGTCAAGCTTTTTGTCTGCTCTAATTTTGAAATGATCTCCCTTGATGAAGCTGCAAAGTTGTTGCTTGGAAATGCCAATAATAGAACAAAAGTTAGACGCCTATACGATATTGCGAACGTTTTATCCTCCATGAACCTAATTGAGAAGGTGATATTCTCCTCAGTTCACTTTAAATTTCCCCATAGAGCATTACAATGGAAGTGTTGCTTTCTGTATTCTGTTCTAATAAATTACAGTAAGCTTATGATGAGTTTACGAAGGTTGCAGACCCATACAACAAACACAAGAAAACCAGCATTTAGGTGGTTGGGTGTGAGAGGGAAAACATGGAGTGAATCAGCTCAGACAAATGTTAAAGAGTCACAGAAAAGGATGTTTGGATCTGACATAACAAACATAAATTTTAAAAGGAAAGTTGATTTGTCCATGGATGGCCAGAACTTTAAAACGCAAAACCAACAGGAAAATATTAGTCCCAGAGCTCAGCTGGAGAAAAAAAGCTTAAAAAAAGATGCAAAACAGACTTCAATGAGCTATCAGTTTGGCCCTTTCGCTCCAGCTTATGTGCACAAAGTTGGAACCTCTGAAAATAATAGTGTGAAACAGGTGCAAGACTGGGAAAGCCTCGCACAGGAGCATCGTCCTCAATATCAAAACCAAGCTTTGAAAGATCTATTCTCTCACTACATGGAAGCATGGAAATCTTGGTACTCTGAAGCTGCTAAAACTTTATAA
Predicted protein sequences of Glyma.04g178300
>Glyma.04g178300.3.p sequence-type=predicted peptide transcript=Glyma.04g178300.3 locus=Glyma.04g178300 id=Glyma.04g178300.3.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MVKSSSKNENRREKSLALLTQNFVKLFVCSNFEMISLDEAAKLLLGNANNRTKVRRLYDIANVLSSMNLIEKVIFSSVHFKFPHRALQWKCCFLYSVLINYSKLMMSLRRLQTHTTNTRKPAFRWLGVRGKTWSESAQTNVKESQKRMFGSDITNINFKRKVDLSMDGQNFKTQNQQENISPRAQLEKKSLKKDAKQTSMSYQFGPFAPAYVHKVGTSENNSVKQVQDWESLAQEHRPQYQNQALKDLFSHYMEAWKSWYSEAAKTL*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo